| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41408851
Identifier: 41408851
GI number: 41408851
Start: 3083723
End: 3084481
Strand: Direct
Name: 41408851
Synonym: MAP2753
Alternate gene names: NA
Gene position: 3083723-3084481 (Clockwise)
Preceding gene: 41408850
Following gene: 41408852
Centisome position: 63.85
GC content: 70.09
Gene sequence:
>759_bases ATGGCCACCAACGACGACCAAGACGACGGGAAGCCACCCATTACCGCGGCCGCTGGCGGTGATGAGACCGCGATCGGGGC GGCCGCTGATGAAACCGAGCTCGTCGCGCCGCTCACCGTGCCCGCGTCCGAGTTGGCCTGGTCCCACGAGGACAGCGACG CTGGTGATTACTCGTGGGGCCGGGCTGCGGAACGCGCCAGCATCATCGTGCTCGCCTGTGCGGCGGTCGCTGTCGTGATC GGTTTGCTGACCTGGCTCGCCTTGCACCTACACGACCAGGCCAAGCCGACAGCCGGCCCGACGGCCGCGCGTCCGGTCAC GATCGAGCCGGCGGCGGCGCTTCCCACGGTCACCGCGGTGCAGGCGCCGGCCGCCGCGCCTCCGGCGACGGTCACGGTCA CACCCCCACCGGCGCCGCCTGCGACGGTGACTGTGCAAGCCGCGCCGGCACCGGCGCCTACGGTGGTGAAGCCAGCTCCC GCGCTTCCGCCGCCGGGCGGCACGACCGTCTTCTCCATCTGCCCGGACGGGCACGAGGGTGTCGTCGGTGGCCACACTTC TTGTGCGTTCGCCGAGAACGTCCGCCGCACCTTCTACGCCTCAGGCATGGCCGACACGTTCACCGCGTTCTCGCCCGTCA CCGGTGACGCGTACGAAATGACGTGCGCCGGCAGGTATCCGGCCTATTTCGAGGACGGGTCGACGAAGGTCTCGACGCGC TGCTACGGCGGCAACAACGCCGAAGTGGTCATCTGGTAG
Upstream 100 bases:
>100_bases CGGCTAGCGGCCGGCGCGGACAGCTGTCCCGGACAAGTTTCCCGGACAGCTGTCACCCGCCGGTGCAACCATTAGACGCG AACCAAACAGGAGACCCAAT
Downstream 100 bases:
>100_bases TTGATCGATCACCTTCGAGTACGAGGGCACTGTCTACGGCTCGAACGCGTGGAAGTCGAACAGCCGCGACCGCCGCTACT ACCGCCAAGGAGGCACGGAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 252; Mature: 251
Protein sequence:
>252_residues MATNDDQDDGKPPITAAAGGDETAIGAAADETELVAPLTVPASELAWSHEDSDAGDYSWGRAAERASIIVLACAAVAVVI GLLTWLALHLHDQAKPTAGPTAARPVTIEPAAALPTVTAVQAPAAAPPATVTVTPPPAPPATVTVQAAPAPAPTVVKPAP ALPPPGGTTVFSICPDGHEGVVGGHTSCAFAENVRRTFYASGMADTFTAFSPVTGDAYEMTCAGRYPAYFEDGSTKVSTR CYGGNNAEVVIW
Sequences:
>Translated_252_residues MATNDDQDDGKPPITAAAGGDETAIGAAADETELVAPLTVPASELAWSHEDSDAGDYSWGRAAERASIIVLACAAVAVVI GLLTWLALHLHDQAKPTAGPTAARPVTIEPAAALPTVTAVQAPAAAPPATVTVTPPPAPPATVTVQAAPAPAPTVVKPAP ALPPPGGTTVFSICPDGHEGVVGGHTSCAFAENVRRTFYASGMADTFTAFSPVTGDAYEMTCAGRYPAYFEDGSTKVSTR CYGGNNAEVVIW >Mature_251_residues ATNDDQDDGKPPITAAAGGDETAIGAAADETELVAPLTVPASELAWSHEDSDAGDYSWGRAAERASIIVLACAAVAVVIG LLTWLALHLHDQAKPTAGPTAARPVTIEPAAALPTVTAVQAPAAAPPATVTVTPPPAPPATVTVQAAPAPAPTVVKPAPA LPPPGGTTVFSICPDGHEGVVGGHTSCAFAENVRRTFYASGMADTFTAFSPVTGDAYEMTCAGRYPAYFEDGSTKVSTRC YGGNNAEVVIW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25488; Mature: 25356
Theoretical pI: Translated: 4.21; Mature: 4.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATNDDQDDGKPPITAAAGGDETAIGAAADETELVAPLTVPASELAWSHEDSDAGDYSWG CCCCCCCCCCCCCEEEECCCCCCEECCCCCCCEEEEEEECCHHHHCCCCCCCCCCCCCCC RAAERASIIVLACAAVAVVIGLLTWLALHLHDQAKPTAGPTAARPVTIEPAAALPTVTAV CHHHHHHEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCHHHCCEEEEE QAPAAAPPATVTVTPPPAPPATVTVQAAPAPAPTVVKPAPALPPPGGTTVFSICPDGHEG CCCCCCCCCEEEECCCCCCCCEEEEEECCCCCCCEECCCCCCCCCCCCEEEEECCCCCCC VVGGHTSCAFAENVRRTFYASGMADTFTAFSPVTGDAYEMTCAGRYPAYFEDGSTKVSTR CCCCCCHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCEEEEECCCCCEEEECCCCEEEEE CYGGNNAEVVIW EECCCCCEEEEC >Mature Secondary Structure ATNDDQDDGKPPITAAAGGDETAIGAAADETELVAPLTVPASELAWSHEDSDAGDYSWG CCCCCCCCCCCCEEEECCCCCCEECCCCCCCEEEEEEECCHHHHCCCCCCCCCCCCCCC RAAERASIIVLACAAVAVVIGLLTWLALHLHDQAKPTAGPTAARPVTIEPAAALPTVTAV CHHHHHHEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCHHHCCEEEEE QAPAAAPPATVTVTPPPAPPATVTVQAAPAPAPTVVKPAPALPPPGGTTVFSICPDGHEG CCCCCCCCCEEEECCCCCCCCEEEEEECCCCCCCEECCCCCCCCCCCCEEEEECCCCCCC VVGGHTSCAFAENVRRTFYASGMADTFTAFSPVTGDAYEMTCAGRYPAYFEDGSTKVSTR CCCCCCHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCEEEEECCCCCEEEECCCCEEEEE CYGGNNAEVVIW EECCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA