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The map label for this gene is pcaH

Identifier: 41408829

GI number: 41408829

Start: 3064749

End: 3065513

Strand: Reverse

Name: pcaH

Synonym: MAP2731c

Alternate gene names: 41408829

Gene position: 3065513-3064749 (Counterclockwise)

Preceding gene: 41408830

Following gene: 41408828

Centisome position: 63.47

GC content: 71.63

Gene sequence:

>765_bases
ATGGACCCCGAGTGTGTCGCTTCTCAGGGCGACATCACCGCGGAGATCGCCCGCATCGCAGCGCAATACCGCGCCGACGA
CGGGGGCGCCGGCCAGCCGCTGCTGGACTATCCGCCGTACCGGGCCACCATCCTGCGCCACCCCAAGCAGCCGCTCGTCG
CGGTCGATCCCGAGGCGGCCGAGCTGTGGGCGCCGTGCTTCGGCCGCGACGACGTCGACCCGCTGGACGCCGACCTGACC
GCCGGCCATCGCGGCGAGCCGATCGGGGAGCGGGTCGTCGTCGCCGGGCGGGTCGTCGACGAGGCCGGCCGGCCGGTGGC
CGGTCAGCTGGTCGAGATCTGGCAGGCCAACGCCGCCGGCCGCTACCGCCACCAGCGCGACCGCCACTCCGCCCCGCTGG
ACCCCAACTTCACCGGCGCCGGGCGCTGTTTGACCGGGCCGGACGGCTGGTATCGCTTCCTGACCATCAAGCCCGGCCCC
TACCCGTGGCGCAACCACCACAACGCCTGGCGGCCCGCCCACATCCATTTCTCGGTCTTCGGAACCGCCTTCACCCAGCG
GCTGATCACCCAGATGTATTTTCCCGGCGACCCGATGTTCGAGCTGGATCCGATCTTTCAGTCCATCCTGGACCCCGCGG
CGCGCCGGCGGCTGATCGCCCACTACGACCACGACCTCACCCAGCCGGAATACGCCACCGGATACCGGTGGGACATCGTG
CTGGCCGGCGGCGGGCGAACCCCGACCGGGGCCGGGAATGACTGA

Upstream 100 bases:

>100_bases
AAGGGACGCGCGGCGCTGGTGCGTTCGCTCTGAGGCCGACGGTCGACCACACCGCCCGCCTGCCGGATTCGGCGACGGAT
CGGGAGTAGCCTCACGGCTC

Downstream 100 bases:

>100_bases
AACAGCCTGCACGCCAGGGCAAACCGTCGGCCCCTTTTTGGACCTGGGATTGCCGTATCCCGGCGACGCCCGGTTGGTCG
ACGACGGCGATCCGCGGGCC

Product: PcaH

Products: NA

Alternate protein names: 3,4-PCD [H]

Number of amino acids: Translated: 254; Mature: 254

Protein sequence:

>254_residues
MDPECVASQGDITAEIARIAAQYRADDGGAGQPLLDYPPYRATILRHPKQPLVAVDPEAAELWAPCFGRDDVDPLDADLT
AGHRGEPIGERVVVAGRVVDEAGRPVAGQLVEIWQANAAGRYRHQRDRHSAPLDPNFTGAGRCLTGPDGWYRFLTIKPGP
YPWRNHHNAWRPAHIHFSVFGTAFTQRLITQMYFPGDPMFELDPIFQSILDPAARRRLIAHYDHDLTQPEYATGYRWDIV
LAGGGRTPTGAGND

Sequences:

>Translated_254_residues
MDPECVASQGDITAEIARIAAQYRADDGGAGQPLLDYPPYRATILRHPKQPLVAVDPEAAELWAPCFGRDDVDPLDADLT
AGHRGEPIGERVVVAGRVVDEAGRPVAGQLVEIWQANAAGRYRHQRDRHSAPLDPNFTGAGRCLTGPDGWYRFLTIKPGP
YPWRNHHNAWRPAHIHFSVFGTAFTQRLITQMYFPGDPMFELDPIFQSILDPAARRRLIAHYDHDLTQPEYATGYRWDIV
LAGGGRTPTGAGND
>Mature_254_residues
MDPECVASQGDITAEIARIAAQYRADDGGAGQPLLDYPPYRATILRHPKQPLVAVDPEAAELWAPCFGRDDVDPLDADLT
AGHRGEPIGERVVVAGRVVDEAGRPVAGQLVEIWQANAAGRYRHQRDRHSAPLDPNFTGAGRCLTGPDGWYRFLTIKPGP
YPWRNHHNAWRPAHIHFSVFGTAFTQRLITQMYFPGDPMFELDPIFQSILDPAARRRLIAHYDHDLTQPEYATGYRWDIV
LAGGGRTPTGAGND

Specific function: Plays an essential role in the utilization of numerous aromatic and hydroaromatic compounds via the beta-ketoadipate pathway [H]

COG id: COG3485

COG function: function code Q; Protocatechuate 3,4-dioxygenase beta subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the intradiol ring-cleavage dioxygenase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000627
- InterPro:   IPR015889
- InterPro:   IPR012785 [H]

Pfam domain/function: PF00775 Dioxygenase_C [H]

EC number: =1.13.11.3 [H]

Molecular weight: Translated: 28125; Mature: 28125

Theoretical pI: Translated: 6.17; Mature: 6.17

Prosite motif: PS00083 INTRADIOL_DIOXYGENAS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDPECVASQGDITAEIARIAAQYRADDGGAGQPLLDYPPYRATILRHPKQPLVAVDPEAA
CCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHCCCCCCEEEECCCHH
ELWAPCFGRDDVDPLDADLTAGHRGEPIGERVVVAGRVVDEAGRPVAGQLVEIWQANAAG
HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEHHHHCCCCHHHHHHHHHHCCCCH
RYRHQRDRHSAPLDPNFTGAGRCLTGPDGWYRFLTIKPGPYPWRNHHNAWRPAHIHFSVF
HHHHHHHCCCCCCCCCCCCCCCEECCCCCEEEEEEECCCCCCCCCCCCCCCCEEEEEEHH
GTAFTQRLITQMYFPGDPMFELDPIFQSILDPAARRRLIAHYDHDLTQPEYATGYRWDIV
HHHHHHHHHHHHCCCCCCCEEHHHHHHHHHCHHHHHHHHHHHCCCCCCCCCCCCCEEEEE
LAGGGRTPTGAGND
EECCCCCCCCCCCC
>Mature Secondary Structure
MDPECVASQGDITAEIARIAAQYRADDGGAGQPLLDYPPYRATILRHPKQPLVAVDPEAA
CCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHCCCCCCEEEECCCHH
ELWAPCFGRDDVDPLDADLTAGHRGEPIGERVVVAGRVVDEAGRPVAGQLVEIWQANAAG
HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEHHHHCCCCHHHHHHHHHHCCCCH
RYRHQRDRHSAPLDPNFTGAGRCLTGPDGWYRFLTIKPGPYPWRNHHNAWRPAHIHFSVF
HHHHHHHCCCCCCCCCCCCCCCEECCCCCEEEEEEECCCCCCCCCCCCCCCCEEEEEEHH
GTAFTQRLITQMYFPGDPMFELDPIFQSILDPAARRRLIAHYDHDLTQPEYATGYRWDIV
HHHHHHHHHHHHCCCCCCCEEHHHHHHHHHCHHHHHHHHHHHCCCCCCCCCCCCCEEEEE
LAGGGRTPTGAGND
EECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2808303 [H]