| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is pcaG
Identifier: 41408828
GI number: 41408828
Start: 3064193
End: 3064756
Strand: Reverse
Name: pcaG
Synonym: MAP2730c
Alternate gene names: 41408828
Gene position: 3064756-3064193 (Counterclockwise)
Preceding gene: 41408829
Following gene: 41408827
Centisome position: 63.46
GC content: 71.81
Gene sequence:
>564_bases ATGACTGAAACAGCCTGCACGCCAGGGCAAACCGTCGGCCCCTTTTTGGACCTGGGATTGCCGTATCCCGGCGACGCCCG GTTGGTCGACGACGGCGATCCGCGGGCCGTCCGGCTGCACGGCACGGTGTACGACGGCGTCGGCGCGGCCGTTCCCGACG CGCTGGTGGAGCTGTGGCAGCCCGACGGCGCGGGACGCATTGTGCGCCAAGCCGGTTCGCTGCGCCGCGATCCCGCGGTG TTCACCGGATGGGGCCGGTGCGCGACCGGCGAGGACGGGGGATACGGGTTCACCACGCTCGCGCCGGGATCGGTGATCGA CGGCCGCACGCCGTTCTTCGCGCTCACCGTGTTCGCCCGCGGGCTGCTGAACCGGCTGTTCACCCGCGCCTACCTGCCCG GCGCCGGACCGGACACCGACCCGCTGCTGGCCCGTGTCGCCCCCGAGCGCCGCACCACGCTGCTGTGCGTCGCCGAAAAC GGCGGCCGCGCTTACCGATTCGATATCCGCCTGCAGGGACCTGGCGAGACGGTGTTCCTGGCCTACCGGACGGACGAGCG ATGA
Upstream 100 bases:
>100_bases GCCCACTACGACCACGACCTCACCCAGCCGGAATACGCCACCGGATACCGGTGGGACATCGTGCTGGCCGGCGGCGGGCG AACCCCGACCGGGGCCGGGA
Downstream 100 bases:
>100_bases CCAACCTGTTGTGGCCGGGGGAGCACCGCGCCGGTGAGCACATGACCGACGCCGCGCTGCTGGATGCGATGGTGGCGGTG GAATCGGCGTGGCTGGCCGC
Product: PcaG
Products: NA
Alternate protein names: 3,4-PCD [H]
Number of amino acids: Translated: 187; Mature: 186
Protein sequence:
>187_residues MTETACTPGQTVGPFLDLGLPYPGDARLVDDGDPRAVRLHGTVYDGVGAAVPDALVELWQPDGAGRIVRQAGSLRRDPAV FTGWGRCATGEDGGYGFTTLAPGSVIDGRTPFFALTVFARGLLNRLFTRAYLPGAGPDTDPLLARVAPERRTTLLCVAEN GGRAYRFDIRLQGPGETVFLAYRTDER
Sequences:
>Translated_187_residues MTETACTPGQTVGPFLDLGLPYPGDARLVDDGDPRAVRLHGTVYDGVGAAVPDALVELWQPDGAGRIVRQAGSLRRDPAV FTGWGRCATGEDGGYGFTTLAPGSVIDGRTPFFALTVFARGLLNRLFTRAYLPGAGPDTDPLLARVAPERRTTLLCVAEN GGRAYRFDIRLQGPGETVFLAYRTDER >Mature_186_residues TETACTPGQTVGPFLDLGLPYPGDARLVDDGDPRAVRLHGTVYDGVGAAVPDALVELWQPDGAGRIVRQAGSLRRDPAVF TGWGRCATGEDGGYGFTTLAPGSVIDGRTPFFALTVFARGLLNRLFTRAYLPGAGPDTDPLLARVAPERRTTLLCVAENG GRAYRFDIRLQGPGETVFLAYRTDER
Specific function: Plays an essential role in the utilization of numerous aromatic and hydroaromatic compounds via the beta-ketoadipate pathway [H]
COG id: COG3485
COG function: function code Q; Protocatechuate 3,4-dioxygenase beta subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the intradiol ring-cleavage dioxygenase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000627 - InterPro: IPR015889 - InterPro: IPR012786 [H]
Pfam domain/function: PF00775 Dioxygenase_C [H]
EC number: =1.13.11.3 [H]
Molecular weight: Translated: 20012; Mature: 19881
Theoretical pI: Translated: 5.28; Mature: 5.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTETACTPGQTVGPFLDLGLPYPGDARLVDDGDPRAVRLHGTVYDGVGAAVPDALVELWQ CCCCCCCCCCCCCCHHHCCCCCCCCCEEEECCCCCEEEEECEEECCCCCHHHHHHHHHHC PDGAGRIVRQAGSLRRDPAVFTGWGRCATGEDGGYGFTTLAPGSVIDGRTPFFALTVFAR CCCCCHHHHHHCCCCCCCCEEECCCCEECCCCCCCEEEEECCCCEECCCCCHHHHHHHHH GLLNRLFTRAYLPGAGPDTDPLLARVAPERRTTLLCVAENGGRAYRFDIRLQGPGETVFL HHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCEEEEEEECCCCEEEEEEEEEECCCCEEEE AYRTDER EEECCCC >Mature Secondary Structure TETACTPGQTVGPFLDLGLPYPGDARLVDDGDPRAVRLHGTVYDGVGAAVPDALVELWQ CCCCCCCCCCCCCHHHCCCCCCCCCEEEECCCCCEEEEECEEECCCCCHHHHHHHHHHC PDGAGRIVRQAGSLRRDPAVFTGWGRCATGEDGGYGFTTLAPGSVIDGRTPFFALTVFAR CCCCCHHHHHHCCCCCCCCEEECCCCEECCCCCCCEEEEECCCCEECCCCCHHHHHHHHH GLLNRLFTRAYLPGAGPDTDPLLARVAPERRTTLLCVAENGGRAYRFDIRLQGPGETVFL HHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCEEEEEEECCCCEEEEEEEEEECCCCEEEE AYRTDER EEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2298704; 8063101 [H]