Definition Mycobacterium avium subsp. paratuberculosis K-10, complete genome.
Accession NC_002944
Length 4,829,781

Click here to switch to the map view.

The map label for this gene is pcaG

Identifier: 41408828

GI number: 41408828

Start: 3064193

End: 3064756

Strand: Reverse

Name: pcaG

Synonym: MAP2730c

Alternate gene names: 41408828

Gene position: 3064756-3064193 (Counterclockwise)

Preceding gene: 41408829

Following gene: 41408827

Centisome position: 63.46

GC content: 71.81

Gene sequence:

>564_bases
ATGACTGAAACAGCCTGCACGCCAGGGCAAACCGTCGGCCCCTTTTTGGACCTGGGATTGCCGTATCCCGGCGACGCCCG
GTTGGTCGACGACGGCGATCCGCGGGCCGTCCGGCTGCACGGCACGGTGTACGACGGCGTCGGCGCGGCCGTTCCCGACG
CGCTGGTGGAGCTGTGGCAGCCCGACGGCGCGGGACGCATTGTGCGCCAAGCCGGTTCGCTGCGCCGCGATCCCGCGGTG
TTCACCGGATGGGGCCGGTGCGCGACCGGCGAGGACGGGGGATACGGGTTCACCACGCTCGCGCCGGGATCGGTGATCGA
CGGCCGCACGCCGTTCTTCGCGCTCACCGTGTTCGCCCGCGGGCTGCTGAACCGGCTGTTCACCCGCGCCTACCTGCCCG
GCGCCGGACCGGACACCGACCCGCTGCTGGCCCGTGTCGCCCCCGAGCGCCGCACCACGCTGCTGTGCGTCGCCGAAAAC
GGCGGCCGCGCTTACCGATTCGATATCCGCCTGCAGGGACCTGGCGAGACGGTGTTCCTGGCCTACCGGACGGACGAGCG
ATGA

Upstream 100 bases:

>100_bases
GCCCACTACGACCACGACCTCACCCAGCCGGAATACGCCACCGGATACCGGTGGGACATCGTGCTGGCCGGCGGCGGGCG
AACCCCGACCGGGGCCGGGA

Downstream 100 bases:

>100_bases
CCAACCTGTTGTGGCCGGGGGAGCACCGCGCCGGTGAGCACATGACCGACGCCGCGCTGCTGGATGCGATGGTGGCGGTG
GAATCGGCGTGGCTGGCCGC

Product: PcaG

Products: NA

Alternate protein names: 3,4-PCD [H]

Number of amino acids: Translated: 187; Mature: 186

Protein sequence:

>187_residues
MTETACTPGQTVGPFLDLGLPYPGDARLVDDGDPRAVRLHGTVYDGVGAAVPDALVELWQPDGAGRIVRQAGSLRRDPAV
FTGWGRCATGEDGGYGFTTLAPGSVIDGRTPFFALTVFARGLLNRLFTRAYLPGAGPDTDPLLARVAPERRTTLLCVAEN
GGRAYRFDIRLQGPGETVFLAYRTDER

Sequences:

>Translated_187_residues
MTETACTPGQTVGPFLDLGLPYPGDARLVDDGDPRAVRLHGTVYDGVGAAVPDALVELWQPDGAGRIVRQAGSLRRDPAV
FTGWGRCATGEDGGYGFTTLAPGSVIDGRTPFFALTVFARGLLNRLFTRAYLPGAGPDTDPLLARVAPERRTTLLCVAEN
GGRAYRFDIRLQGPGETVFLAYRTDER
>Mature_186_residues
TETACTPGQTVGPFLDLGLPYPGDARLVDDGDPRAVRLHGTVYDGVGAAVPDALVELWQPDGAGRIVRQAGSLRRDPAVF
TGWGRCATGEDGGYGFTTLAPGSVIDGRTPFFALTVFARGLLNRLFTRAYLPGAGPDTDPLLARVAPERRTTLLCVAENG
GRAYRFDIRLQGPGETVFLAYRTDER

Specific function: Plays an essential role in the utilization of numerous aromatic and hydroaromatic compounds via the beta-ketoadipate pathway [H]

COG id: COG3485

COG function: function code Q; Protocatechuate 3,4-dioxygenase beta subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the intradiol ring-cleavage dioxygenase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000627
- InterPro:   IPR015889
- InterPro:   IPR012786 [H]

Pfam domain/function: PF00775 Dioxygenase_C [H]

EC number: =1.13.11.3 [H]

Molecular weight: Translated: 20012; Mature: 19881

Theoretical pI: Translated: 5.28; Mature: 5.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTETACTPGQTVGPFLDLGLPYPGDARLVDDGDPRAVRLHGTVYDGVGAAVPDALVELWQ
CCCCCCCCCCCCCCHHHCCCCCCCCCEEEECCCCCEEEEECEEECCCCCHHHHHHHHHHC
PDGAGRIVRQAGSLRRDPAVFTGWGRCATGEDGGYGFTTLAPGSVIDGRTPFFALTVFAR
CCCCCHHHHHHCCCCCCCCEEECCCCEECCCCCCCEEEEECCCCEECCCCCHHHHHHHHH
GLLNRLFTRAYLPGAGPDTDPLLARVAPERRTTLLCVAENGGRAYRFDIRLQGPGETVFL
HHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCEEEEEEECCCCEEEEEEEEEECCCCEEEE
AYRTDER
EEECCCC
>Mature Secondary Structure 
TETACTPGQTVGPFLDLGLPYPGDARLVDDGDPRAVRLHGTVYDGVGAAVPDALVELWQ
CCCCCCCCCCCCCHHHCCCCCCCCCEEEECCCCCEEEEECEEECCCCCHHHHHHHHHHC
PDGAGRIVRQAGSLRRDPAVFTGWGRCATGEDGGYGFTTLAPGSVIDGRTPFFALTVFAR
CCCCCHHHHHHCCCCCCCCEEECCCCEECCCCCCCEEEEECCCCEECCCCCHHHHHHHHH
GLLNRLFTRAYLPGAGPDTDPLLARVAPERRTTLLCVAENGGRAYRFDIRLQGPGETVFL
HHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCEEEEEEECCCCEEEEEEEEEECCCCEEEE
AYRTDER
EEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2298704; 8063101 [H]