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The map label for this gene is yrpB [H]

Identifier: 41408820

GI number: 41408820

Start: 3058435

End: 3059376

Strand: Reverse

Name: yrpB [H]

Synonym: MAP2722c

Alternate gene names: 41408820

Gene position: 3059376-3058435 (Counterclockwise)

Preceding gene: 41408821

Following gene: 41408818

Centisome position: 63.34

GC content: 74.95

Gene sequence:

>942_bases
ATGTTGTCCACACCCTGGTCCGCGGGTTTCGGCCTGCGGGTACCCATCGTCAACGCCCCGATGGGCGGGGTCGCCGGCGG
CCGGCTGGCCGCGGCGGTCACAGCCGCCGGTGGCCTGGGCATGGTCGGGATGGGCAGCGTGGCCACCCGGCGGCTGCTGG
CCGAGCAGTTGCAATACGTCGACGGCCGGTTCGGGATCGGGCTGGTCGACTGGGTGATGCGCAACGAGGCGGGACTGCTC
GAGGACGCGCTGGCCGCCCGGCCCGCCCTGCTGTCGGTCAGTTTCGGCACCGACTGGTCCTGGGTCGCCAAGGCGCACGA
CGCCGGAATCCCCACCGTCACACAGGTTTACGACAGCCTCGGCGCGCGGCAGGCGGTCGACGCCGGCGTCGACATCCTGG
TGGCGCGCGGCTCGGAGGGCGGCGGGGACGGCGAGGTCAAGCTGGGGCTGCTGCCGCTGCTCGACGCCGCGCTGGACGCC
GTCTCGGTGCCGGTGCTGGCCGGCGGCGGCGTCGCCTCGGCGCGCAGCCTGGCCGCGGTGTTGGCCGCCGGCGCCAGCGG
GGCGTGGGTGGGCACCCGGCTGTCGGCCTGCCCGGAGGCGCTGACCGCCGACGGCAACCGGCGGGCCCTGGTCGAGGCCG
CCGAGACCGACACCGCCGTCACCCGGGCCTTCGACGTCGCCAAGGGGTTGCCCTGGCCGGCCCGGTTCCCGTCCCGGGTG
CTGGCCAACGACTTCGTCGAGCGGTGGACCGGCCGGGAGGAAACGCTGGACGCCGGGGCCTGCGAGGAGTTGGCCGCCGC
GATCGCCGCCGGGGACTGCCGGGTCGCGCCGGTGGATGCCGGCCAGGGGGTGGGGATGATCCGCAACGACGCGACGGTCG
CCGAGGTCATCGACGAAATGTGCAGCGGCGCAGAGCAATTGCTGTCCCGCTGGGGCTCGTGA

Upstream 100 bases:

>100_bases
TGTCGCCATCCCGGCCGAACGGCACGCCCTGCACGCGGTGGAGGACTCGGTGGTCCTGCTGACCGTGCTGAAAACCATCC
CGTCGGCGCACTAGCCGGCC

Downstream 100 bases:

>100_bases
CGCTCGGCGGCGGTCGTCACGCTGGCGTGACGCTCGGAGGCGGTCGCCACGCTGGCGTGACGCTCGGCGGCGAAACCGCG
GTGGCTACACCGCGCGCAGG

Product: hypothetical protein

Products: NA

Alternate protein names: Nitroalkane oxidase [H]

Number of amino acids: Translated: 313; Mature: 313

Protein sequence:

>313_residues
MLSTPWSAGFGLRVPIVNAPMGGVAGGRLAAAVTAAGGLGMVGMGSVATRRLLAEQLQYVDGRFGIGLVDWVMRNEAGLL
EDALAARPALLSVSFGTDWSWVAKAHDAGIPTVTQVYDSLGARQAVDAGVDILVARGSEGGGDGEVKLGLLPLLDAALDA
VSVPVLAGGGVASARSLAAVLAAGASGAWVGTRLSACPEALTADGNRRALVEAAETDTAVTRAFDVAKGLPWPARFPSRV
LANDFVERWTGREETLDAGACEELAAAIAAGDCRVAPVDAGQGVGMIRNDATVAEVIDEMCSGAEQLLSRWGS

Sequences:

>Translated_313_residues
MLSTPWSAGFGLRVPIVNAPMGGVAGGRLAAAVTAAGGLGMVGMGSVATRRLLAEQLQYVDGRFGIGLVDWVMRNEAGLL
EDALAARPALLSVSFGTDWSWVAKAHDAGIPTVTQVYDSLGARQAVDAGVDILVARGSEGGGDGEVKLGLLPLLDAALDA
VSVPVLAGGGVASARSLAAVLAAGASGAWVGTRLSACPEALTADGNRRALVEAAETDTAVTRAFDVAKGLPWPARFPSRV
LANDFVERWTGREETLDAGACEELAAAIAAGDCRVAPVDAGQGVGMIRNDATVAEVIDEMCSGAEQLLSRWGS
>Mature_313_residues
MLSTPWSAGFGLRVPIVNAPMGGVAGGRLAAAVTAAGGLGMVGMGSVATRRLLAEQLQYVDGRFGIGLVDWVMRNEAGLL
EDALAARPALLSVSFGTDWSWVAKAHDAGIPTVTQVYDSLGARQAVDAGVDILVARGSEGGGDGEVKLGLLPLLDAALDA
VSVPVLAGGGVASARSLAAVLAAGASGAWVGTRLSACPEALTADGNRRALVEAAETDTAVTRAFDVAKGLPWPARFPSRV
LANDFVERWTGREETLDAGACEELAAAIAAGDCRVAPVDAGQGVGMIRNDATVAEVIDEMCSGAEQLLSRWGS

Specific function: Catalyzes the oxidation of alkyl nitronates to produce the corresponding carbonyl compounds and nitrites [H]

COG id: COG2070

COG function: function code R; Dioxygenases related to 2-nitropropane dioxygenase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nitronate monooxygenase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004136
- InterPro:   IPR013785 [H]

Pfam domain/function: PF03060 NPD [H]

EC number: =1.13.12.16 [H]

Molecular weight: Translated: 31806; Mature: 31806

Theoretical pI: Translated: 4.36; Mature: 4.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSTPWSAGFGLRVPIVNAPMGGVAGGRLAAAVTAAGGLGMVGMGSVATRRLLAEQLQYV
CCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH
DGRFGIGLVDWVMRNEAGLLEDALAARPALLSVSFGTDWSWVAKAHDAGIPTVTQVYDSL
CCCCCCHHHHHHHHCCCCHHHHHHHCCCEEEEEECCCCHHHHHHHHCCCCCHHHHHHHHH
GARQAVDAGVDILVARGSEGGGDGEVKLGLLPLLDAALDAVSVPVLAGGGVASARSLAAV
CHHHHHHCCCEEEEEECCCCCCCCEEEEHHHHHHHHHHHHHHCCEEECCCHHHHHHHHHH
LAAGASGAWVGTRLSACPEALTADGNRRALVEAAETDTAVTRAFDVAKGLPWPARFPSRV
HHCCCCCCHHHHHHHHCCHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHCCCCCCCCHHHH
LANDFVERWTGREETLDAGACEELAAAIAAGDCRVAPVDAGQGVGMIRNDATVAEVIDEM
HHHHHHHHHCCCHHHCCCCHHHHHHHHHHCCCCEEEECCCCCCCCEEECCCHHHHHHHHH
CSGAEQLLSRWGS
HCCHHHHHHHCCC
>Mature Secondary Structure
MLSTPWSAGFGLRVPIVNAPMGGVAGGRLAAAVTAAGGLGMVGMGSVATRRLLAEQLQYV
CCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH
DGRFGIGLVDWVMRNEAGLLEDALAARPALLSVSFGTDWSWVAKAHDAGIPTVTQVYDSL
CCCCCCHHHHHHHHCCCCHHHHHHHCCCEEEEEECCCCHHHHHHHHCCCCCHHHHHHHHH
GARQAVDAGVDILVARGSEGGGDGEVKLGLLPLLDAALDAVSVPVLAGGGVASARSLAAV
CHHHHHHCCCEEEEEECCCCCCCCEEEEHHHHHHHHHHHHHHCCEEECCCHHHHHHHHHH
LAAGASGAWVGTRLSACPEALTADGNRRALVEAAETDTAVTRAFDVAKGLPWPARFPSRV
HHCCCCCCHHHHHHHHCCHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHCCCCCCCCHHHH
LANDFVERWTGREETLDAGACEELAAAIAAGDCRVAPVDAGQGVGMIRNDATVAEVIDEM
HHHHHHHHHCCCHHHCCCCHHHHHHHHHHCCCCEEEECCCCCCCCEEECCCHHHHHHHHH
CSGAEQLLSRWGS
HCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9308178; 9384377 [H]