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The map label for this gene is ydbC [H]

Identifier: 41408818

GI number: 41408818

Start: 3056914

End: 3057840

Strand: Reverse

Name: ydbC [H]

Synonym: MAP2720c

Alternate gene names: 41408818

Gene position: 3057840-3056914 (Counterclockwise)

Preceding gene: 41408820

Following gene: 41408817

Centisome position: 63.31

GC content: 69.69

Gene sequence:

>927_bases
TTGCCACGCCGGGGCGCGCGGCGAGGTTCGGCGGGTACGGTCGGAGGGGTGAGCGCGCCACAGACTATTGCCCAGGCATC
CGGAACGTTGACCCTCGGCGGCGACCTGACCGTCAACCGCCTCGGCTTCGGCGCGATGCGGTTGACCGGCGCAGGGGTGT
GGGGCCCGCCCGCGGACCGCGACGAGTGCGTCCGGGTGTTGCGGCGGGCCGTCGAACTCGGGGTGAACTTCATCGACACC
GCCGACTCCTACGGCCCGTACGTGTCCGAGGAGATCATCCGCGAGGCGCTGCACCCGTACGACGGACTGGTGATCGCGAC
CAAGGCGGGGCTGCTGCGCACCGGCCCCGACATCTGGATCCCGTTGGGCAACCCCAGTTATCTGCGCCAGGAATGCGAGA
TGAGCCTGCGCCGGCTGGGCACCGACACCATCGACTTGTTCCAGCTGCACCGCATCGACCCCAACTTCCCGCTGCAGGAT
CAGGTGGGCGAGCTGCTCACCCTGAAGAACGAGGGCAAGATCCGCCACATCGGGCTGTCGGAGATCACGCCCGATCAGCT
CGCCGCGGCCCAGCAGATCACCGAGATCGTGTCGGTGCAGAACATGTACAACGTGACGGCCCGGCGCGCCGAGCCGCTGC
TGGACGCCGCGACCCGGCAGGGCATCGCCTTCATCCCGTGGTTCCCGTTGGCGGCCGGGCCGCTGGCCGCGCCCGACGGC
CCGCTGCAGCGCATCGCCGCCGAGCACGACGCGACGCCGTCGCAGCTGGCGTTGGCCTGGTTGCTGAAACGCTCGCCGGT
GATGCTGCCCATTCCGGGGACCTCCAAGGTGGCGCACCTGGAGGAGAACGTCGCCGCTGCCCGGATCACGCTGTCCGACG
AGGAATTCGAGGCGCTGTCGACGGCCGGGACTCAGCAGACGGTGTAG

Upstream 100 bases:

>100_bases
GATGGTGATATCCGGCGGGCAGGTCGCCGGAGGCCGTGGCCCCCACCTCGGAATAGGTCAGCGGAAGTTCCTCGAGCGCT
CGTAGGTCCACCCGGCCAGC

Downstream 100 bases:

>100_bases
CCGGCGCGCGAAACCGCGCCCGCCGGGCAATACGGTGTGGTGGTGGCCGAACATCAACGACACCCCGGCGGTGGGTTCAA
TCCGCCCGAACCGACCACCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 308; Mature: 307

Protein sequence:

>308_residues
MPRRGARRGSAGTVGGVSAPQTIAQASGTLTLGGDLTVNRLGFGAMRLTGAGVWGPPADRDECVRVLRRAVELGVNFIDT
ADSYGPYVSEEIIREALHPYDGLVIATKAGLLRTGPDIWIPLGNPSYLRQECEMSLRRLGTDTIDLFQLHRIDPNFPLQD
QVGELLTLKNEGKIRHIGLSEITPDQLAAAQQITEIVSVQNMYNVTARRAEPLLDAATRQGIAFIPWFPLAAGPLAAPDG
PLQRIAAEHDATPSQLALAWLLKRSPVMLPIPGTSKVAHLEENVAAARITLSDEEFEALSTAGTQQTV

Sequences:

>Translated_308_residues
MPRRGARRGSAGTVGGVSAPQTIAQASGTLTLGGDLTVNRLGFGAMRLTGAGVWGPPADRDECVRVLRRAVELGVNFIDT
ADSYGPYVSEEIIREALHPYDGLVIATKAGLLRTGPDIWIPLGNPSYLRQECEMSLRRLGTDTIDLFQLHRIDPNFPLQD
QVGELLTLKNEGKIRHIGLSEITPDQLAAAQQITEIVSVQNMYNVTARRAEPLLDAATRQGIAFIPWFPLAAGPLAAPDG
PLQRIAAEHDATPSQLALAWLLKRSPVMLPIPGTSKVAHLEENVAAARITLSDEEFEALSTAGTQQTV
>Mature_307_residues
PRRGARRGSAGTVGGVSAPQTIAQASGTLTLGGDLTVNRLGFGAMRLTGAGVWGPPADRDECVRVLRRAVELGVNFIDTA
DSYGPYVSEEIIREALHPYDGLVIATKAGLLRTGPDIWIPLGNPSYLRQECEMSLRRLGTDTIDLFQLHRIDPNFPLQDQ
VGELLTLKNEGKIRHIGLSEITPDQLAAAQQITEIVSVQNMYNVTARRAEPLLDAATRQGIAFIPWFPLAAGPLAAPDGP
LQRIAAEHDATPSQLALAWLLKRSPVMLPIPGTSKVAHLEENVAAARITLSDEEFEALSTAGTQQTV

Specific function: Unknown

COG id: COG0667

COG function: function code C; Predicted oxidoreductases (related to aryl-alcohol dehydrogenases)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aldo/keto reductase 2 family [H]

Homologues:

Organism=Escherichia coli, GI1787674, Length=282, Percent_Identity=47.5177304964539, Blast_Score=241, Evalue=4e-65,
Organism=Escherichia coli, GI87081735, Length=310, Percent_Identity=35.1612903225806, Blast_Score=139, Evalue=3e-34,
Organism=Escherichia coli, GI1788070, Length=303, Percent_Identity=31.6831683168317, Blast_Score=117, Evalue=1e-27,
Organism=Escherichia coli, GI1789375, Length=286, Percent_Identity=29.020979020979, Blast_Score=98, Evalue=6e-22,
Organism=Escherichia coli, GI1788081, Length=265, Percent_Identity=30.188679245283, Blast_Score=95, Evalue=5e-21,
Organism=Escherichia coli, GI48994888, Length=283, Percent_Identity=26.8551236749117, Blast_Score=80, Evalue=1e-16,
Organism=Escherichia coli, GI1786400, Length=271, Percent_Identity=29.1512915129151, Blast_Score=78, Evalue=9e-16,
Organism=Drosophila melanogaster, GI24646155, Length=291, Percent_Identity=26.8041237113402, Blast_Score=70, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001395
- InterPro:   IPR023210 [H]

Pfam domain/function: PF00248 Aldo_ket_red [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 33135; Mature: 33004

Theoretical pI: Translated: 5.40; Mature: 5.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRRGARRGSAGTVGGVSAPQTIAQASGTLTLGGDLTVNRLGFGAMRLTGAGVWGPPADR
CCCCCCCCCCCCCCCCCCCCHHHHHCCCCEEECCCEEEHHHCCCEEEEECCCCCCCCCCH
DECVRVLRRAVELGVNFIDTADSYGPYVSEEIIREALHPYDGLVIATKAGLLRTGPDIWI
HHHHHHHHHHHHHCCCCEECCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCEECCCCEEE
PLGNPSYLRQECEMSLRRLGTDTIDLFQLHRIDPNFPLQDQVGELLTLKNEGKIRHIGLS
ECCCHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCHHHHHHEEEECCCCCEEEECCC
EITPDQLAAAQQITEIVSVQNMYNVTARRAEPLLDAATRQGIAFIPWFPLAAGPLAAPDG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCC
PLQRIAAEHDATPSQLALAWLLKRSPVMLPIPGTSKVAHLEENVAAARITLSDEEFEALS
HHHHHHHHCCCCHHHHHHHHHHHCCCEEEECCCCCHHHHHHHCCEEEEEEECCHHHHHHH
TAGTQQTV
HCCCCCCC
>Mature Secondary Structure 
PRRGARRGSAGTVGGVSAPQTIAQASGTLTLGGDLTVNRLGFGAMRLTGAGVWGPPADR
CCCCCCCCCCCCCCCCCCCHHHHHCCCCEEECCCEEEHHHCCCEEEEECCCCCCCCCCH
DECVRVLRRAVELGVNFIDTADSYGPYVSEEIIREALHPYDGLVIATKAGLLRTGPDIWI
HHHHHHHHHHHHHCCCCEECCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCEECCCCEEE
PLGNPSYLRQECEMSLRRLGTDTIDLFQLHRIDPNFPLQDQVGELLTLKNEGKIRHIGLS
ECCCHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCHHHHHHEEEECCCCCEEEECCC
EITPDQLAAAQQITEIVSVQNMYNVTARRAEPLLDAATRQGIAFIPWFPLAAGPLAAPDG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCC
PLQRIAAEHDATPSQLALAWLLKRSPVMLPIPGTSKVAHLEENVAAARITLSDEEFEALS
HHHHHHHHCCCCHHHHHHHHHHHCCCEEEECCCCCHHHHHHHCCEEEEEEECCHHHHHHH
TAGTQQTV
HCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Oxidoreductases [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1665988; 9097039; 9278503; 9748275 [H]