| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41408817
Identifier: 41408817
GI number: 41408817
Start: 3056251
End: 3056877
Strand: Reverse
Name: 41408817
Synonym: MAP2719c
Alternate gene names: NA
Gene position: 3056877-3056251 (Counterclockwise)
Preceding gene: 41408818
Following gene: 41408816
Centisome position: 63.29
GC content: 71.13
Gene sequence:
>627_bases GTGGTGGTGGCCGAACATCAACGACACCCCGGCGGTGGGTTCAATCCGCCCGAACCGACCACCAAGGGCGGGCCCGACTA CGGCCGGTTCATCGACGCCGTGCGCGCGCTGCAGGATCACGCCCGCGCCGTCGACGCCCCCGACGAGGTGATCACCCAGG CCGCCGACCAGCTGGAGAAGGTGTCGGCGCTGCTGGCGCCGTTCGACGCCGACGAGTGGGCGTCGCCGTCGGGCCGGCGG ATGGATCTGCCGATGCGCGGCAACATCCTGACCATCCCGATGTCGGCCCAGAAGGGTGCGGACGGCCGCATGCACGGCCA GGCCCGCTTCGCCCGCTTTCACTTGGGCCGCAACGGGGCCGTGCACGGCGGGTCGCTGGGGATGCTGTTCGACACCGTGC TGGGCCTGACCGCCTCGGTGCTCACCGGCAGCCGGCGCCAGCGCACCGCCTACCTCAAGATCGACTACCGCAGCATCGTC CCGATCGAGACCGAGCTGCAGTTCGACGCCGGCGTCGACCGGGTCGACGGACGCAAGATCTTCGTGTCCGGCCGGCTGAC CCACGGCGAGCGGTTGCTGACCGAGGCCGACGCGCTGTTCGTGCGGCTCAAACCCGGCCAGCCGTGA
Upstream 100 bases:
>100_bases GATCACGCTGTCCGACGAGGAATTCGAGGCGCTGTCGACGGCCGGGACTCAGCAGACGGTGTAGCCGGCGCGCGAAACCG CGCCCGCCGGGCAATACGGT
Downstream 100 bases:
>100_bases TGGGAGTGGGTACCCACCCCGCATGACTGGCTCCGCATCGCCCTGCGGCCCGGTGCTCGCGGGTTTGCCCGGGATCCGTG GCTGGCAGGAGGACCTGTAC
Product: hypothetical protein
Products: NA
Alternate protein names: Thioesterase Family Protein; Thioesterase; Thioesterase Superfamily
Number of amino acids: Translated: 208; Mature: 208
Protein sequence:
>208_residues MVVAEHQRHPGGGFNPPEPTTKGGPDYGRFIDAVRALQDHARAVDAPDEVITQAADQLEKVSALLAPFDADEWASPSGRR MDLPMRGNILTIPMSAQKGADGRMHGQARFARFHLGRNGAVHGGSLGMLFDTVLGLTASVLTGSRRQRTAYLKIDYRSIV PIETELQFDAGVDRVDGRKIFVSGRLTHGERLLTEADALFVRLKPGQP
Sequences:
>Translated_208_residues MVVAEHQRHPGGGFNPPEPTTKGGPDYGRFIDAVRALQDHARAVDAPDEVITQAADQLEKVSALLAPFDADEWASPSGRR MDLPMRGNILTIPMSAQKGADGRMHGQARFARFHLGRNGAVHGGSLGMLFDTVLGLTASVLTGSRRQRTAYLKIDYRSIV PIETELQFDAGVDRVDGRKIFVSGRLTHGERLLTEADALFVRLKPGQP >Mature_208_residues MVVAEHQRHPGGGFNPPEPTTKGGPDYGRFIDAVRALQDHARAVDAPDEVITQAADQLEKVSALLAPFDADEWASPSGRR MDLPMRGNILTIPMSAQKGADGRMHGQARFARFHLGRNGAVHGGSLGMLFDTVLGLTASVLTGSRRQRTAYLKIDYRSIV PIETELQFDAGVDRVDGRKIFVSGRLTHGERLLTEADALFVRLKPGQP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22635; Mature: 22635
Theoretical pI: Translated: 8.99; Mature: 8.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVVAEHQRHPGGGFNPPEPTTKGGPDYGRFIDAVRALQDHARAVDAPDEVITQAADQLEK CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH VSALLAPFDADEWASPSGRRMDLPMRGNILTIPMSAQKGADGRMHGQARFARFHLGRNGA HHHHHCCCCCCCCCCCCCCEEECCCCCCEEEEECCCCCCCCCCCCCHHEEEEEECCCCCC VHGGSLGMLFDTVLGLTASVLTGSRRQRTAYLKIDYRSIVPIETELQFDAGVDRVDGRKI CCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCEECCEEECEEECCCCCCCCCCEE FVSGRLTHGERLLTEADALFVRLKPGQP EEEECCCCCHHHHHCCCEEEEEECCCCC >Mature Secondary Structure MVVAEHQRHPGGGFNPPEPTTKGGPDYGRFIDAVRALQDHARAVDAPDEVITQAADQLEK CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH VSALLAPFDADEWASPSGRRMDLPMRGNILTIPMSAQKGADGRMHGQARFARFHLGRNGA HHHHHCCCCCCCCCCCCCCEEECCCCCCEEEEECCCCCCCCCCCCCHHEEEEEECCCCCC VHGGSLGMLFDTVLGLTASVLTGSRRQRTAYLKIDYRSIVPIETELQFDAGVDRVDGRKI CCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCEECCEEECEEECCCCCCCCCCEE FVSGRLTHGERLLTEADALFVRLKPGQP EEEECCCCCHHHHHCCCEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA