| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41408771
Identifier: 41408771
GI number: 41408771
Start: 3010530
End: 3011459
Strand: Direct
Name: 41408771
Synonym: MAP2673
Alternate gene names: NA
Gene position: 3010530-3011459 (Clockwise)
Preceding gene: 41408770
Following gene: 41408781
Centisome position: 62.33
GC content: 66.45
Gene sequence:
>930_bases ATGCAAACGATCCCGGACCTCGTCGGCGGTGTAGGCCCGGCGTTTCCGTTGGTCGCGGACCACCAGCACGCCGCCGGCGA CGACGCCGGCCGCACCGGCCAGCCCGAGCCACTTCCACATGCTGCGCATGCCACCAGGCTAGGCGTAGTTGTGATTGACT GGATCCCCGCCTGGCCTTACCCGCGAGAAGCGGGGCGGGGCGGCGGCGATGTCGGCGAAAATTGCAGCGGGAGACGGGCT TACACGATGCTCACCTTGAACCAAGCGCTCGAGGAGACCCGGACCGGTGACCTGTGGCTGTTTCGCGGCGGTTCGGGTCC CGACCGCGCCATCCAGACGTTGACCAACAGCCCCGTCAATCACGTCGGCATGACGGTGGCCATCGATGACCTGCCGCCGC TCATCTGGCACGCCGAGCTGGGTGACAAGCTCGTCGACCTGTGGACCGGGACGAATCATCGTGGCGTGCAACTCAACGAT CTGCACCAGTCGGTGTTGCAGTGGACGCAGCGCTACCGCCAACGGTGCTGGCTGCGCCAGCTGACGCCGCCGGCCACCCG CGAGCAGGAGAACAGGCTGCTGCGCGTGATCGCCCGGATGGACGGCACCGCGTTTCCCACCACCATGCGCCTCACCGGCC GGTGGCTGCGCGGCCGACTGCCCACCGCCTACGACTGGGCACGCGGAATCCCCGTGGTGGACAAGAAGATTCGGGAGACA ATGCGCCGACGAAAGGAACGTCAACGGCTCGGTCTGGAAGCGGCCTACTGCGCGGAAACCGTGGCGATCACCTACGAGGA AATGGGTCTGCTCACCACCGAGAAATACTCGAACTGGTTCGACCCGGGCTCGTTCTGGAGCGGCGACAAGCTTCCGCTCA CGCCGGGCTATGCGCTGGGCGACGAGATCGAGATCGCGGTCGATCGGTGA
Upstream 100 bases:
>100_bases GCGAGGTCGAGCTCAAGGGATTCTCGGGCACCTACCGGTTGTTCGCCGTGCTGGCCTCGCCCGATCCCGACTGAAGCGCA TCGTATTCGGCCAGCCGCTG
Downstream 100 bases:
>100_bases GGGGTTAGTCGACCGTCATCTCGCCCATCCGCGACCACCCCGTGGCCTCGACGGTCTGGCTGATGATCTTGGGCGTGGAC TTCAGCGCCTGCGGGAGCTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 309; Mature: 309
Protein sequence:
>309_residues MQTIPDLVGGVGPAFPLVADHQHAAGDDAGRTGQPEPLPHAAHATRLGVVVIDWIPAWPYPREAGRGGGDVGENCSGRRA YTMLTLNQALEETRTGDLWLFRGGSGPDRAIQTLTNSPVNHVGMTVAIDDLPPLIWHAELGDKLVDLWTGTNHRGVQLND LHQSVLQWTQRYRQRCWLRQLTPPATREQENRLLRVIARMDGTAFPTTMRLTGRWLRGRLPTAYDWARGIPVVDKKIRET MRRRKERQRLGLEAAYCAETVAITYEEMGLLTTEKYSNWFDPGSFWSGDKLPLTPGYALGDEIEIAVDR
Sequences:
>Translated_309_residues MQTIPDLVGGVGPAFPLVADHQHAAGDDAGRTGQPEPLPHAAHATRLGVVVIDWIPAWPYPREAGRGGGDVGENCSGRRA YTMLTLNQALEETRTGDLWLFRGGSGPDRAIQTLTNSPVNHVGMTVAIDDLPPLIWHAELGDKLVDLWTGTNHRGVQLND LHQSVLQWTQRYRQRCWLRQLTPPATREQENRLLRVIARMDGTAFPTTMRLTGRWLRGRLPTAYDWARGIPVVDKKIRET MRRRKERQRLGLEAAYCAETVAITYEEMGLLTTEKYSNWFDPGSFWSGDKLPLTPGYALGDEIEIAVDR >Mature_309_residues MQTIPDLVGGVGPAFPLVADHQHAAGDDAGRTGQPEPLPHAAHATRLGVVVIDWIPAWPYPREAGRGGGDVGENCSGRRA YTMLTLNQALEETRTGDLWLFRGGSGPDRAIQTLTNSPVNHVGMTVAIDDLPPLIWHAELGDKLVDLWTGTNHRGVQLND LHQSVLQWTQRYRQRCWLRQLTPPATREQENRLLRVIARMDGTAFPTTMRLTGRWLRGRLPTAYDWARGIPVVDKKIRET MRRRKERQRLGLEAAYCAETVAITYEEMGLLTTEKYSNWFDPGSFWSGDKLPLTPGYALGDEIEIAVDR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34621; Mature: 34621
Theoretical pI: Translated: 7.26; Mature: 7.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQTIPDLVGGVGPAFPLVADHQHAAGDDAGRTGQPEPLPHAAHATRLGVVVIDWIPAWPY CCCCHHHHCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCHHHHHHEEEEEEEEECCCCC PREAGRGGGDVGENCSGRRAYTMLTLNQALEETRTGDLWLFRGGSGPDRAIQTLTNSPVN CHHCCCCCCCCCCCCCCCEEEEEHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHCCCHH HVGMTVAIDDLPPLIWHAELGDKLVDLWTGTNHRGVQLNDLHQSVLQWTQRYRQRCWLRQ HCEEEEEECCCCCCEEEHHHCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH LTPPATREQENRLLRVIARMDGTAFPTTMRLTGRWLRGRLPTAYDWARGIPVVDKKIRET CCCCCCCHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHCCCCCHHHHHCCCCHHHHHHHHH MRRRKERQRLGLEAAYCAETVAITYEEMGLLTTEKYSNWFDPGSFWSGDKLPLTPGYALG HHHHHHHHHHCCHHHHHHHHHEEEHHHHCCEEHHHHCCCCCCCCCCCCCCCCCCCCCCCC DEIEIAVDR CCEEEEECC >Mature Secondary Structure MQTIPDLVGGVGPAFPLVADHQHAAGDDAGRTGQPEPLPHAAHATRLGVVVIDWIPAWPY CCCCHHHHCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCHHHHHHEEEEEEEEECCCCC PREAGRGGGDVGENCSGRRAYTMLTLNQALEETRTGDLWLFRGGSGPDRAIQTLTNSPVN CHHCCCCCCCCCCCCCCCEEEEEHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHCCCHH HVGMTVAIDDLPPLIWHAELGDKLVDLWTGTNHRGVQLNDLHQSVLQWTQRYRQRCWLRQ HCEEEEEECCCCCCEEEHHHCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH LTPPATREQENRLLRVIARMDGTAFPTTMRLTGRWLRGRLPTAYDWARGIPVVDKKIRET CCCCCCCHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHCCCCCHHHHHCCCCHHHHHHHHH MRRRKERQRLGLEAAYCAETVAITYEEMGLLTTEKYSNWFDPGSFWSGDKLPLTPGYALG HHHHHHHHHHCCHHHHHHHHHEEEHHHHCCEEHHHHCCCCCCCCCCCCCCCCCCCCCCCC DEIEIAVDR CCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA