| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
Click here to switch to the map view.
The map label for this gene is pkn2 [H]
Identifier: 41408770
GI number: 41408770
Start: 3009832
End: 3010503
Strand: Direct
Name: pkn2 [H]
Synonym: MAP2672
Alternate gene names: 41408770
Gene position: 3009832-3010503 (Clockwise)
Preceding gene: 41408767
Following gene: 41408771
Centisome position: 62.32
GC content: 69.79
Gene sequence:
>672_bases CTGCTCGCGGGCGGGCGGGAAGCGGTCAAGACGGTATGGAACACCGCCAATCTCGTGCGCAAGGAGGGTTTCGGCGCGGC GGTGCGCAGCTCGATCGAGGAGCTCGCGGACTGGGCCGAGGTGGAGCGGCCCGACCTGGCCCGGGTGACCCCGGACGGCC GGGTGGTGATCCTGTTCACCGACATCGAGGAATCCACCGCGCTCAACGAGCGGATCGGCGACCGGGCCTGGGTCAAGCTG ATCAGCTCGCACGACAAGCTGGTCTCGGATCTGGTGCGGCGCCAATCCGGTCACGTGGTGAAGAGCCAGGGCGACGGATT CATGGTCGCCTTCGCCCGGCCCGAGCAGGCGGTGCGGTGCGGCATCGAGTTGCAGCGCGCGTTGCGCCGGAACGCAAACC GCAAGCGGCACGAGGAGATTCGGGTCCGGATCGGGATCCACATGGGCCGCTCGGTGCGCCGCGGCGACGACCTGTTCGGC CGCAACGTCGCGATGGCGGCGCGGGTCGCCGCCCAGGCCGCCGGTGGGGAGATCCTGGTGAGTCAGCCGGTGCGAGACGC GCTTTCGCGCTCCGACGGGATCCGGTTCGATGACGGACGCGAGGTCGAGCTCAAGGGATTCTCGGGCACCTACCGGTTGT TCGCCGTGCTGGCCTCGCCCGATCCCGACTGA
Upstream 100 bases:
>100_bases CGCCGTCGAGGCCGGCGCGCTGGCCGTGCTGTGGCGGCGGCTGGTGCGCAGCCGCGCCGAACTCGACGAGCTGCGTCAGC GCACCGACGCCCGCAACTGG
Downstream 100 bases:
>100_bases AGCGCATCGTATTCGGCCAGCCGCTGATGCAAACGATCCCGGACCTCGTCGGCGGTGTAGGCCCGGCGTTTCCGTTGGTC GCGGACCACCAGCACGCCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 223; Mature: 223
Protein sequence:
>223_residues MLAGGREAVKTVWNTANLVRKEGFGAAVRSSIEELADWAEVERPDLARVTPDGRVVILFTDIEESTALNERIGDRAWVKL ISSHDKLVSDLVRRQSGHVVKSQGDGFMVAFARPEQAVRCGIELQRALRRNANRKRHEEIRVRIGIHMGRSVRRGDDLFG RNVAMAARVAAQAAGGEILVSQPVRDALSRSDGIRFDDGREVELKGFSGTYRLFAVLASPDPD
Sequences:
>Translated_223_residues MLAGGREAVKTVWNTANLVRKEGFGAAVRSSIEELADWAEVERPDLARVTPDGRVVILFTDIEESTALNERIGDRAWVKL ISSHDKLVSDLVRRQSGHVVKSQGDGFMVAFARPEQAVRCGIELQRALRRNANRKRHEEIRVRIGIHMGRSVRRGDDLFG RNVAMAARVAAQAAGGEILVSQPVRDALSRSDGIRFDDGREVELKGFSGTYRLFAVLASPDPD >Mature_223_residues MLAGGREAVKTVWNTANLVRKEGFGAAVRSSIEELADWAEVERPDLARVTPDGRVVILFTDIEESTALNERIGDRAWVKL ISSHDKLVSDLVRRQSGHVVKSQGDGFMVAFARPEQAVRCGIELQRALRRNANRKRHEEIRVRIGIHMGRSVRRGDDLFG RNVAMAARVAAQAAGGEILVSQPVRDALSRSDGIRFDDGREVELKGFSGTYRLFAVLASPDPD
Specific function: Regulates the activity of endogenous beta-lactamase or related enzymes, by blocking their secretion by phosphorylation, in response to an external signal yet to be identified [H]
COG id: COG2114
COG function: function code T; Adenylate cyclase, family 3 (some proteins contain HAMP domain)
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 protein kinase domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001054 - InterPro: IPR011009 - InterPro: IPR000719 - InterPro: IPR017441 - InterPro: IPR017442 - InterPro: IPR008271 - InterPro: IPR002290 [H]
Pfam domain/function: PF00211 Guanylate_cyc; PF00069 Pkinase [H]
EC number: =2.7.11.1 [H]
Molecular weight: Translated: 24656; Mature: 24656
Theoretical pI: Translated: 10.18; Mature: 10.18
Prosite motif: PS50125 GUANYLATE_CYCLASES_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLAGGREAVKTVWNTANLVRKEGFGAAVRSSIEELADWAEVERPDLARVTPDGRVVILFT CCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCEEECCCCEEEEEEE DIEESTALNERIGDRAWVKLISSHDKLVSDLVRRQSGHVVKSQGDGFMVAFARPEQAVRC CCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCEEEEEECCHHHHHH GIELQRALRRNANRKRHEEIRVRIGIHMGRSVRRGDDLFGRNVAMAARVAAQAAGGEILV HHHHHHHHHHCCCHHHHHHEEEEEEEECCCCCCCCCHHHCCHHHHHHHHHHHHCCCEEEE SQPVRDALSRSDGIRFDDGREVELKGFSGTYRLFAVLASPDPD CCHHHHHHHHCCCCCCCCCCEEEEECCCCCEEEEEEEECCCCC >Mature Secondary Structure MLAGGREAVKTVWNTANLVRKEGFGAAVRSSIEELADWAEVERPDLARVTPDGRVVILFT CCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCEEECCCCEEEEEEE DIEESTALNERIGDRAWVKLISSHDKLVSDLVRRQSGHVVKSQGDGFMVAFARPEQAVRC CCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCEEEEEECCHHHHHH GIELQRALRRNANRKRHEEIRVRIGIHMGRSVRRGDDLFGRNVAMAARVAAQAAGGEILV HHHHHHHHHHCCCHHHHHHEEEEEEEECCCCCCCCCHHHCCHHHHHHHHHHHHCCCEEEE SQPVRDALSRSDGIRFDDGREVELKGFSGTYRLFAVLASPDPD CCHHHHHHHHCCCCCCCCCCEEEEECCCCCEEEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7774814 [H]