Definition Mycobacterium avium subsp. paratuberculosis K-10, complete genome.
Accession NC_002944
Length 4,829,781

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The map label for this gene is 41408764

Identifier: 41408764

GI number: 41408764

Start: 3003371

End: 3004612

Strand: Reverse

Name: 41408764

Synonym: MAP2666c

Alternate gene names: NA

Gene position: 3004612-3003371 (Counterclockwise)

Preceding gene: 41408765

Following gene: 41408761

Centisome position: 62.21

GC content: 75.68

Gene sequence:

>1242_bases
ATGACGGGCCACCGGATGGCGGCCGTCGATGCGCAGTTCTACTGGATGTCGGCCAAGATCCCCAACGACGAGTTCCTGCT
GTACGCCTTCGACGGCGAGCCGGCCGATTACCCGGCTGCCGCCGACCAGCTGCGCCGGCGGGCCGACGCGGAGCCGGCGC
TGAGCATCCGGGTGCGCGACCGCGGCCGGCTGCGCTACCCGCACTGGGTGCCCGCGGCCGTCGCCCCCGAGCAGGTGGTC
CGCCACGAGCTGGCCGAGCACAGCTGGGACGGGTGCCTGGCCGCTGTCGCCGGGCTCGCCGACGACCAACTCGACCTTCG
CCGGATGGCCTGGCGGCTGCACGTTTTCGGCCCGGTCCACGGCATTCCGGGGGTCCGCGGGCCGGGCACGGTCGCGGTGC
TGCAGGTCGCGCACGCGCTGGCCGACGGCGCCCGCGCCGCGGCGTTGGCCGCCCGGCTGTTCGGCCGGGCCGCCCCGGTG
CCCGAGGTGCCCGTCCCGCGGCCGGGCTGGTTGCCCTGGCGGGCCGCGGTGGCCGCGCGCACCCACTGCCAACTGGTGCG
TGACACCCGTGCCGGGCGGCTGGCCCCCGGGGCCGGGCCGCGTCCGCTGCTGCCGACGAACGCCCGGCCCGCCGGCGTGC
GTTCGCTGCGCACCCTGGTGCGGCACCGCGCGCAGCTGCCCGGTCCGACCGCCACGGTTGCGGTGCTGGGTGCGGTGGCG
CAGGCGCTGTCCGATCTGCTTGGCGATCAAGCGGATTCGCTGGGCGCCGAGGTTCCGATGGCCAAACCCGGTGCGCCGCA
GGCGTACAACCACTTCGGCAACGTCGTGGTGGACCTGCATCCGAGGCTGGGGGCCCAGGCCCGCGCGGAGCGGATCGCGG
CAGGCCTGGCCGCCGGGCGGCGCCGCTTCGAGCACCCGGCAACCCGGGCCGCCGACCGCGCATTCGCCGCGGTGCCGGCC
GCGCTGTTGCGTTGGGGCGTAGACCAATTCGACGCCGACCAGCGTCCGGACCAGGTGGCCGGCAACACCGTGGTGTCCAG
CGTCAATCGCGGGCCGGCCGATTTGAGCTTCGGCGGCGCGCGGGTGGTGCTGACGGCGGGCTATCCCGCGCTGTCGCCGG
TGATGGGGCTGACGCACGGCGTGCACGGCATCGGGGACACCATCGCGATCAGCGTGCACGCGGCGGCGTCGGCGGTTCCC
GACGTCGACGCCTACCTGGCGTTGCTCGACGCGGCGCTATGA

Upstream 100 bases:

>100_bases
CGAAGTCGACATCGTCGAACATGCCGGGCACTTCCTGTAGCTCGAACAGCCCGACAAGGTCGCCGGCCTGGTGCTCGGGT
TCATCGGCTCACCCGGCTGA

Downstream 100 bases:

>100_bases
CTATTGCGCGTCACCGGATCTGGCGGCTTCCTGCCTGGTCAGGCCGACGGCGACGATGAGCTCTTCGTGCAGTTCGAACC
ACACCGTGTGGTAGGAGTCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 413; Mature: 412

Protein sequence:

>413_residues
MTGHRMAAVDAQFYWMSAKIPNDEFLLYAFDGEPADYPAAADQLRRRADAEPALSIRVRDRGRLRYPHWVPAAVAPEQVV
RHELAEHSWDGCLAAVAGLADDQLDLRRMAWRLHVFGPVHGIPGVRGPGTVAVLQVAHALADGARAAALAARLFGRAAPV
PEVPVPRPGWLPWRAAVAARTHCQLVRDTRAGRLAPGAGPRPLLPTNARPAGVRSLRTLVRHRAQLPGPTATVAVLGAVA
QALSDLLGDQADSLGAEVPMAKPGAPQAYNHFGNVVVDLHPRLGAQARAERIAAGLAAGRRRFEHPATRAADRAFAAVPA
ALLRWGVDQFDADQRPDQVAGNTVVSSVNRGPADLSFGGARVVLTAGYPALSPVMGLTHGVHGIGDTIAISVHAAASAVP
DVDAYLALLDAAL

Sequences:

>Translated_413_residues
MTGHRMAAVDAQFYWMSAKIPNDEFLLYAFDGEPADYPAAADQLRRRADAEPALSIRVRDRGRLRYPHWVPAAVAPEQVV
RHELAEHSWDGCLAAVAGLADDQLDLRRMAWRLHVFGPVHGIPGVRGPGTVAVLQVAHALADGARAAALAARLFGRAAPV
PEVPVPRPGWLPWRAAVAARTHCQLVRDTRAGRLAPGAGPRPLLPTNARPAGVRSLRTLVRHRAQLPGPTATVAVLGAVA
QALSDLLGDQADSLGAEVPMAKPGAPQAYNHFGNVVVDLHPRLGAQARAERIAAGLAAGRRRFEHPATRAADRAFAAVPA
ALLRWGVDQFDADQRPDQVAGNTVVSSVNRGPADLSFGGARVVLTAGYPALSPVMGLTHGVHGIGDTIAISVHAAASAVP
DVDAYLALLDAAL
>Mature_412_residues
TGHRMAAVDAQFYWMSAKIPNDEFLLYAFDGEPADYPAAADQLRRRADAEPALSIRVRDRGRLRYPHWVPAAVAPEQVVR
HELAEHSWDGCLAAVAGLADDQLDLRRMAWRLHVFGPVHGIPGVRGPGTVAVLQVAHALADGARAAALAARLFGRAAPVP
EVPVPRPGWLPWRAAVAARTHCQLVRDTRAGRLAPGAGPRPLLPTNARPAGVRSLRTLVRHRAQLPGPTATVAVLGAVAQ
ALSDLLGDQADSLGAEVPMAKPGAPQAYNHFGNVVVDLHPRLGAQARAERIAAGLAAGRRRFEHPATRAADRAFAAVPAA
LLRWGVDQFDADQRPDQVAGNTVVSSVNRGPADLSFGGARVVLTAGYPALSPVMGLTHGVHGIGDTIAISVHAAASAVPD
VDAYLALLDAAL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43535; Mature: 43404

Theoretical pI: Translated: 9.92; Mature: 9.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGHRMAAVDAQFYWMSAKIPNDEFLLYAFDGEPADYPAAADQLRRRADAEPALSIRVRD
CCCCEEEEECEEEEEEEEECCCCCEEEEEECCCCCCCCHHHHHHHHHCCCCCCEEEEECC
RGRLRYPHWVPAAVAPEQVVRHELAEHSWDGCLAAVAGLADDQLDLRRMAWRLHVFGPVH
CCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHEEECCCC
GIPGVRGPGTVAVLQVAHALADGARAAALAARLFGRAAPVPEVPVPRPGWLPWRAAVAAR
CCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHH
THCQLVRDTRAGRLAPGAGPRPLLPTNARPAGVRSLRTLVRHRAQLPGPTATVAVLGAVA
HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
QALSDLLGDQADSLGAEVPMAKPGAPQAYNHFGNVVVDLHPRLGAQARAERIAAGLAAGR
HHHHHHHCCCHHHCCCCCCCCCCCCCHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHH
RRFEHPATRAADRAFAAVPAALLRWGVDQFDADQRPDQVAGNTVVSSVNRGPADLSFGGA
HHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCE
RVVLTAGYPALSPVMGLTHGVHGIGDTIAISVHAAASAVPDVDAYLALLDAAL
EEEEEECCCHHHHHHHHHHCCCCCCCEEEEEEEHHHHCCCCHHHHHHHHHHCC
>Mature Secondary Structure 
TGHRMAAVDAQFYWMSAKIPNDEFLLYAFDGEPADYPAAADQLRRRADAEPALSIRVRD
CCCEEEEECEEEEEEEEECCCCCEEEEEECCCCCCCCHHHHHHHHHCCCCCCEEEEECC
RGRLRYPHWVPAAVAPEQVVRHELAEHSWDGCLAAVAGLADDQLDLRRMAWRLHVFGPVH
CCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHEEECCCC
GIPGVRGPGTVAVLQVAHALADGARAAALAARLFGRAAPVPEVPVPRPGWLPWRAAVAAR
CCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHH
THCQLVRDTRAGRLAPGAGPRPLLPTNARPAGVRSLRTLVRHRAQLPGPTATVAVLGAVA
HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
QALSDLLGDQADSLGAEVPMAKPGAPQAYNHFGNVVVDLHPRLGAQARAERIAAGLAAGR
HHHHHHHCCCHHHCCCCCCCCCCCCCHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHH
RRFEHPATRAADRAFAAVPAALLRWGVDQFDADQRPDQVAGNTVVSSVNRGPADLSFGGA
HHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCE
RVVLTAGYPALSPVMGLTHGVHGIGDTIAISVHAAASAVPDVDAYLALLDAAL
EEEEEECCCHHHHHHHHHHCCCCCCCEEEEEEEHHHHCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA