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The map label for this gene is kstR2 [H]

Identifier: 41408756

GI number: 41408756

Start: 2992906

End: 2994195

Strand: Direct

Name: kstR2 [H]

Synonym: MAP2658

Alternate gene names: 41408756

Gene position: 2992906-2994195 (Clockwise)

Preceding gene: 41408755

Following gene: 41408757

Centisome position: 61.97

GC content: 68.29

Gene sequence:

>1290_bases
ATGGCGAAAGCCGAGTCGCTCCGAGCCGGCAGCACCGCCGATTCCCCGACGCGCCGGGCCGAGATCCTGGCCACCGCCGC
GTCCCTGATCGCGTCCTCGGGCCTGCGAACGTCGTTGCAGGAGATCGCCGATGCCGCCGGCATCCTTCCCGGCAGCCTCT
ATCACCACTTCGAGTCCAAAGAGGCCATCCTCGTCGAGCTGACCCGCCGCTACCAAGAGGATCTGGAGAGGATCGGCCGG
GCCGCCCAGGCCAGGTTGGACGAACCCGACTCACGTCCGGTCCCCGAGCAGATCATCGAGCTCGGCTCGGCGATCGCCAA
CTGCGCCGTCGAGCACCGCGCCGCTTTGCAGATGTCGTTCTACGAGGGGCCGGGCACCGACCCGGAGCTGACCAAGCTGA
CCCGGCAGCGGCCGGTGGCCATCCAGGAGGCGATGCTGCAGACGCTGCGCGCCGGCCGGTGGAGCGGCTACATCAAACCC
GACATCGACCTGCCCACGCTGGCCGACCGCATCTGCCAAACCATGCTGCAGGTCGGTCTCGACGTCATGCGGCACACCGC
ATCCGCCGACCCGGTCGCCGAACTGCTGTGCCGAATCATCTTGCAGGGCTTGGCAAGCCGGCCGCCCAGCGACACCGCGC
TGGACCGGTCGAAGGCCTTCGCCGCCGCCAACGAGGTGATCGAAACCTGGTCCGACGACAGCGACGCCGATCCCGGTGAC
AAAGCGGCGCTGGTGCGCGCGGTGGCACGCGCCGAATTCGGCCGCCGCGGTTATGAAGTCACCACCATCAGGGACATCGC
GGCGGCGGCCGGCCTGGGCACCGGAACGGTGTATCGGGTGATCGGGTCCAAGGACGAGCTGCTGGACTCGATCATGCGCT
CCTTCGGCAAAAAGGTGGAGGCGGGATGGGTCAGCGTGCTGCGCTCCGACGCCACACCCACCGAGAAGCTGGACGCGTTG
AGCTGGGTCAACGTCAACGCGCTGGACCAGTTCTCCGACGAATTCCGGATCCAGCTCGCCTGGATGCGGCTCTCTCCCCC
GACGGCCAACCCGGGCTGGTCCTACGCCACCCGCCTGCGGCAGATGAAATCGCTGCTCTCCGAAGGGCTCCGGACGGGTG
AGATCGCCATCGCCGCGCCGTCCACCGCGATGCTGGCGCGCTGCCTGATCGCCCTGCAGTGGATACCGGAGAACATCCTC
GCCGAGATCGGCAAACGCCCAGCTCTGCTGCATGTCCGCGACACCGTTTTGCGTGGCGTGGCGGTCCGCGGCGCCGCCGT
CGACAACTAG

Upstream 100 bases:

>100_bases
TCCGGTCTGATAGCCTCTAACAAAGATTTGGTTCGGCGGAAAGAGGACGAATGCGTATGGTCACGCACCCGCAGTCGTCC
GGATCTGCACACCGCTGACC

Downstream 100 bases:

>100_bases
GTCGACAACCCGGTCGATATCTAGGTATTGAAACCAAATAACCGTTCCCCATACAGTTGGGCAATTAGAATCGGGTTGGC
GATTAACGAGAAGGGGATTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 429; Mature: 428

Protein sequence:

>429_residues
MAKAESLRAGSTADSPTRRAEILATAASLIASSGLRTSLQEIADAAGILPGSLYHHFESKEAILVELTRRYQEDLERIGR
AAQARLDEPDSRPVPEQIIELGSAIANCAVEHRAALQMSFYEGPGTDPELTKLTRQRPVAIQEAMLQTLRAGRWSGYIKP
DIDLPTLADRICQTMLQVGLDVMRHTASADPVAELLCRIILQGLASRPPSDTALDRSKAFAAANEVIETWSDDSDADPGD
KAALVRAVARAEFGRRGYEVTTIRDIAAAAGLGTGTVYRVIGSKDELLDSIMRSFGKKVEAGWVSVLRSDATPTEKLDAL
SWVNVNALDQFSDEFRIQLAWMRLSPPTANPGWSYATRLRQMKSLLSEGLRTGEIAIAAPSTAMLARCLIALQWIPENIL
AEIGKRPALLHVRDTVLRGVAVRGAAVDN

Sequences:

>Translated_429_residues
MAKAESLRAGSTADSPTRRAEILATAASLIASSGLRTSLQEIADAAGILPGSLYHHFESKEAILVELTRRYQEDLERIGR
AAQARLDEPDSRPVPEQIIELGSAIANCAVEHRAALQMSFYEGPGTDPELTKLTRQRPVAIQEAMLQTLRAGRWSGYIKP
DIDLPTLADRICQTMLQVGLDVMRHTASADPVAELLCRIILQGLASRPPSDTALDRSKAFAAANEVIETWSDDSDADPGD
KAALVRAVARAEFGRRGYEVTTIRDIAAAAGLGTGTVYRVIGSKDELLDSIMRSFGKKVEAGWVSVLRSDATPTEKLDAL
SWVNVNALDQFSDEFRIQLAWMRLSPPTANPGWSYATRLRQMKSLLSEGLRTGEIAIAAPSTAMLARCLIALQWIPENIL
AEIGKRPALLHVRDTVLRGVAVRGAAVDN
>Mature_428_residues
AKAESLRAGSTADSPTRRAEILATAASLIASSGLRTSLQEIADAAGILPGSLYHHFESKEAILVELTRRYQEDLERIGRA
AQARLDEPDSRPVPEQIIELGSAIANCAVEHRAALQMSFYEGPGTDPELTKLTRQRPVAIQEAMLQTLRAGRWSGYIKPD
IDLPTLADRICQTMLQVGLDVMRHTASADPVAELLCRIILQGLASRPPSDTALDRSKAFAAANEVIETWSDDSDADPGDK
AALVRAVARAEFGRRGYEVTTIRDIAAAAGLGTGTVYRVIGSKDELLDSIMRSFGKKVEAGWVSVLRSDATPTEKLDALS
WVNVNALDQFSDEFRIQLAWMRLSPPTANPGWSYATRLRQMKSLLSEGLRTGEIAIAAPSTAMLARCLIALQWIPENILA
EIGKRPALLHVRDTVLRGVAVRGAAVDN

Specific function: Controls the expression of a small regulon that may play a role in the utilization of cholesterol [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH tetR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR015893
- InterPro:   IPR011075
- InterPro:   IPR001647 [H]

Pfam domain/function: PF00440 TetR_N [H]

EC number: NA

Molecular weight: Translated: 46558; Mature: 46426

Theoretical pI: Translated: 5.81; Mature: 5.81

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKAESLRAGSTADSPTRRAEILATAASLIASSGLRTSLQEIADAAGILPGSLYHHFESK
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHCCC
EAILVELTRRYQEDLERIGRAAQARLDEPDSRPVPEQIIELGSAIANCAVEHRAALQMSF
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEE
YEGPGTDPELTKLTRQRPVAIQEAMLQTLRAGRWSGYIKPDIDLPTLADRICQTMLQVGL
CCCCCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
DVMRHTASADPVAELLCRIILQGLASRPPSDTALDRSKAFAAANEVIETWSDDSDADPGD
HHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCH
KAALVRAVARAEFGRRGYEVTTIRDIAAAAGLGTGTVYRVIGSKDELLDSIMRSFGKKVE
HHHHHHHHHHHHHCCCCCEEHHHHHHHHHHCCCCCHHHHHHCCHHHHHHHHHHHHHHHHH
AGWVSVLRSDATPTEKLDALSWVNVNALDQFSDEFRIQLAWMRLSPPTANPGWSYATRLR
HHHHHHHHCCCCCHHHHHHHHCCCCHHHHHCCHHHEEEEEEEEECCCCCCCCHHHHHHHH
QMKSLLSEGLRTGEIAIAAPSTAMLARCLIALQWIPENILAEIGKRPALLHVRDTVLRGV
HHHHHHHCCCCCCCEEEECCCHHHHHHHHHHHHHCCHHHHHHCCCCCCEEHHHHHHHHHH
AVRGAAVDN
HHCCCCCCC
>Mature Secondary Structure 
AKAESLRAGSTADSPTRRAEILATAASLIASSGLRTSLQEIADAAGILPGSLYHHFESK
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHCCC
EAILVELTRRYQEDLERIGRAAQARLDEPDSRPVPEQIIELGSAIANCAVEHRAALQMSF
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEE
YEGPGTDPELTKLTRQRPVAIQEAMLQTLRAGRWSGYIKPDIDLPTLADRICQTMLQVGL
CCCCCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
DVMRHTASADPVAELLCRIILQGLASRPPSDTALDRSKAFAAANEVIETWSDDSDADPGD
HHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCH
KAALVRAVARAEFGRRGYEVTTIRDIAAAAGLGTGTVYRVIGSKDELLDSIMRSFGKKVE
HHHHHHHHHHHHHCCCCCEEHHHHHHHHHHCCCCCHHHHHHCCHHHHHHHHHHHHHHHHH
AGWVSVLRSDATPTEKLDALSWVNVNALDQFSDEFRIQLAWMRLSPPTANPGWSYATRLR
HHHHHHHHCCCCCHHHHHHHHCCCCHHHHHCCHHHEEEEEEEEECCCCCCCCHHHHHHHH
QMKSLLSEGLRTGEIAIAAPSTAMLARCLIALQWIPENILAEIGKRPALLHVRDTVLRGV
HHHHHHHCCCCCCCEEEECCCHHHHHHHHHHHHHCCHHHHHHCCCCCCEEHHHHHHHHHH
AVRGAAVDN
HHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA