| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is ucpA [C]
Identifier: 41408757
GI number: 41408757
Start: 2994298
End: 2995140
Strand: Direct
Name: ucpA [C]
Synonym: MAP2659
Alternate gene names: 41408757
Gene position: 2994298-2995140 (Clockwise)
Preceding gene: 41408756
Following gene: 41408758
Centisome position: 62.0
GC content: 67.26
Gene sequence:
>843_bases ATGACGATTGTCGATCGGCTGCGCTACGACGGCAAGCGCGCGCTGGTGGTCGGTGGTGCGACCGGCATGGGCGCCGCGGC GGCCAAATCCGCGGCCGAGCTGGGCGCCGAGGTCATCGTGCTGGACTACGCCCCGGTGACCTACGACGTCGCCAAGTCCA TCCAGGTCGACCTGCGCGATCCCGCGTCCATCGACGCCGCGCTCGAGCAGCTCGACGGCCCGGTGCACGCGGTGTTCTCG GCCGCTGGCATCGCCGAGGGCACCACCGACCTGATGGCGATCAACTTCCTCGGACACCGCTACCTGATCGAGCGGCTGCT GGAACGCAACCAGCTGCCGTCGGGCTCGGCGATCTGCTTCATCTCCTCGGTCGCGGGCATGGGGTGGGAGAACGACCTGG ACCTGCTGAACGAGTTCCTGGCCACCCCGGACTTCGCGACGGCGCAGGAATGGGTCAAGGCGCACGAGCCGGAAGGCATC ATCCACTACGGGTTCTCCAAGAAGGTCGTCAACGCCTACGTGGCAACCCAGGGCTATCCGCTGCTGAAGAAGGGCATCCG GATCAACGCGATCTGCCCCGGTCCCACCGACACCCCGCTGGCCCAGGCCAACGCCGACCTGTGGCTCACCTTCGCCCAGG ACTACCGCGACGAGACCGGGTCCAAGGTGCACACGCCCGAACAGATGGGCGACGTGATGGCGTTCCTCAACAGCGCCGCC GCCTTCGGCATCAACGGGATCACGCTGCTGGTCGACTACGGCCACACCATGGCGTCGCTGACCGGCGCCTACCCGCCGGG CAAGCCGATCATCGACATCATCATGGGCCGCGTGAAGCTCTGA
Upstream 100 bases:
>100_bases CGACAACCCGGTCGATATCTAGGTATTGAAACCAAATAACCGTTCCCCATACAGTTGGGCAATTAGAATCGGGTTGGCGA TTAACGAGAAGGGGATTTCC
Downstream 100 bases:
>100_bases CCGGGCCGGCGTAGCGTCGGCTGTCATGGCACGAGTCGTGATCGTCGGCGGCCACGGCAAGGTCGCGTTGCAGCTGTCTG CCATCCTGACGCAGCGCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: Short-Chain Dehydrogenase/Reductase SDR; NAD-Dependent Epimerase/Dehydratase; Short-Chain Type Dehydrogenase/Reductase; Oxidoreductase Short-Chain Dehydrogenase/Reductase Family; Oxidoreductase Short Chain Dehydrogenase/Reductase Family; Dehydrogenase/Reductase; 3-Oxoacyl-(Acyl-Carrier-Protein) Reductase
Number of amino acids: Translated: 280; Mature: 279
Protein sequence:
>280_residues MTIVDRLRYDGKRALVVGGATGMGAAAAKSAAELGAEVIVLDYAPVTYDVAKSIQVDLRDPASIDAALEQLDGPVHAVFS AAGIAEGTTDLMAINFLGHRYLIERLLERNQLPSGSAICFISSVAGMGWENDLDLLNEFLATPDFATAQEWVKAHEPEGI IHYGFSKKVVNAYVATQGYPLLKKGIRINAICPGPTDTPLAQANADLWLTFAQDYRDETGSKVHTPEQMGDVMAFLNSAA AFGINGITLLVDYGHTMASLTGAYPPGKPIIDIIMGRVKL
Sequences:
>Translated_280_residues MTIVDRLRYDGKRALVVGGATGMGAAAAKSAAELGAEVIVLDYAPVTYDVAKSIQVDLRDPASIDAALEQLDGPVHAVFS AAGIAEGTTDLMAINFLGHRYLIERLLERNQLPSGSAICFISSVAGMGWENDLDLLNEFLATPDFATAQEWVKAHEPEGI IHYGFSKKVVNAYVATQGYPLLKKGIRINAICPGPTDTPLAQANADLWLTFAQDYRDETGSKVHTPEQMGDVMAFLNSAA AFGINGITLLVDYGHTMASLTGAYPPGKPIIDIIMGRVKL >Mature_279_residues TIVDRLRYDGKRALVVGGATGMGAAAAKSAAELGAEVIVLDYAPVTYDVAKSIQVDLRDPASIDAALEQLDGPVHAVFSA AGIAEGTTDLMAINFLGHRYLIERLLERNQLPSGSAICFISSVAGMGWENDLDLLNEFLATPDFATAQEWVKAHEPEGII HYGFSKKVVNAYVATQGYPLLKKGIRINAICPGPTDTPLAQANADLWLTFAQDYRDETGSKVHTPEQMGDVMAFLNSAAA FGINGITLLVDYGHTMASLTGAYPPGKPIIDIIMGRVKL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87082100, Length=279, Percent_Identity=23.6559139784946, Blast_Score=63, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 1.-.-.- [C]
Molecular weight: Translated: 29910; Mature: 29778
Theoretical pI: Translated: 4.72; Mature: 4.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIVDRLRYDGKRALVVGGATGMGAAAAKSAAELGAEVIVLDYAPVTYDVAKSIQVDLRD CCCHHHHCCCCCEEEEEECCCCCCHHHHHHHHHCCCEEEEEECCCCHHHHHHCEEEECCC PASIDAALEQLDGPVHAVFSAAGIAEGTTDLMAINFLGHRYLIERLLERNQLPSGSAICF CCHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEE ISSVAGMGWENDLDLLNEFLATPDFATAQEWVKAHEPEGIIHYGFSKKVVNAYVATQGYP EEHHHCCCCCCCHHHHHHHHCCCCHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHCCCCH LLKKGIRINAICPGPTDTPLAQANADLWLTFAQDYRDETGSKVHTPEQMGDVMAFLNSAA HHHCCCEEEEECCCCCCCCHHHCCCCEEEEEHHHHHHCCCCCCCCHHHHHHHHHHHHHHH AFGINGITLLVDYGHTMASLTGAYPPGKPIIDIIMGRVKL HCCCCCEEEEEECCCHHHHHCCCCCCCCHHHHHHHHHCCC >Mature Secondary Structure TIVDRLRYDGKRALVVGGATGMGAAAAKSAAELGAEVIVLDYAPVTYDVAKSIQVDLRD CCHHHHCCCCCEEEEEECCCCCCHHHHHHHHHCCCEEEEEECCCCHHHHHHCEEEECCC PASIDAALEQLDGPVHAVFSAAGIAEGTTDLMAINFLGHRYLIERLLERNQLPSGSAICF CCHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEE ISSVAGMGWENDLDLLNEFLATPDFATAQEWVKAHEPEGIIHYGFSKKVVNAYVATQGYP EEHHHCCCCCCCHHHHHHHHCCCCHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHCCCCH LLKKGIRINAICPGPTDTPLAQANADLWLTFAQDYRDETGSKVHTPEQMGDVMAFLNSAA HHHCCCEEEEECCCCCCCCHHHCCCCEEEEEHHHHHHCCCCCCCCHHHHHHHHHHHHHHH AFGINGITLLVDYGHTMASLTGAYPPGKPIIDIIMGRVKL HCCCCCEEEEEECCCHHHHHCCCCCCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA