| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41408752
Identifier: 41408752
GI number: 41408752
Start: 2987927
End: 2989750
Strand: Reverse
Name: 41408752
Synonym: MAP2654c
Alternate gene names: NA
Gene position: 2989750-2987927 (Counterclockwise)
Preceding gene: 41408760
Following gene: 41408751
Centisome position: 61.9
GC content: 75.11
Gene sequence:
>1824_bases TTGACTGCCGTGCAGCCGGACTCTACGGTTGGAACAGATATTTGGTCAACAAGTCGGAGGTTGAGCATGGGGGATGACGC CTGTGCCGACCAGTGGCAAGCCCTGGGCATGCTCGCCTCCGCGCTCGCGGGCCGGGCCGTCGCGGTCGCCGGGCTGCCAC CGGGGGAGCCGGCGTGGACCGACGGCCAGACGATCTACGTCGACGCCGGCGCGCCCGGGGCGCTCAAATCCCTAGCGGTG CAGGCGTCGATGATCGCCGCCGGCAGCCTGCGCCCCGACGTCGTGGGCCGGTTGCTGCGGCACCGCAAGCTGGCCCAGCG CTACCTGACCGTCGAAGGCCACCGCGCCCTGGTGGCCAACGCGCCGGTGCTGCCCCGCGTGTTGGCGTCCCTGGGCGACC GTGGCGTCGCCGGCCGCAGCGATTCCCCGCGGGCGTCGCTGGCGCTGGCCGCCGCACGGGTGGCGCTGCCCGACCCGGCG CCGGAATTCGGGGTGATCCGGGCGGGGAAGGTGCTTGCCGCATGCGGGCGGGCCGCCCGGCCGGACCAGCCCGACGACAA GGCGGCACCCGCGCACGTCCCGCGGCGCGACGGGGCCGCCGACCTCGCGGAGCTCGACGACGCGGCGGTCGACGACTCGG ACGACCCGGACCTGTTCACCAGCCCGGTCGGCGGGGGCGGCGCCCTCGGCAAGTGGCTGAAGAAGCTGCTGTCGTCGGCG CGCAAGACCGGCACCGGCGGCGGGCCGCCGGGCGCGGACAGCCCCACGCATCGCACCGATTCCGGAAAGCGCGGTGCCTA CGCCGTCGCCTCGCTGGCGTCGGCCCCCGCCGACGAGGGGAACGACGAGGATCCCGCCGACGGGGTGCGGTATCCGGAAT GGGACGTGGCGCGCGGGAGTTACCGGCCCGCCTGGTGCACCGTGCGCGAGGTCGAGCCGGCCATCACGGCGCGGGCCACG CTGGCCGTCGACGACGCCATCGCGGTGCGCCGCCCGCTCGCGCGACTGGGCATGGGTCTGCACCGGCGGCACCGGCAGCC GCAGGGCGACGACATCGACATCGACGCCGCGGTGGAGGCCCGAGTCGAGGTACGGGCCGGGTCGGTGCCCGACGAGGCGG TGTACCTGGACAGCCTGCGGCGCCGCCGCGACCTGTCGGTGCTGCTGCTCCTCGACGTGTCGGGGTCGGCGGCCGAGCCG GGCACCGTCGGGCGCACCGTGCATGAGCAGCAGCGCGCGGCGGTCGCCGATCTCGCTGTGGCGCTTCATGATTTGGGGGA TCGGGTCGCGCTGTACGCCTACTACTCGCAGGGCCGGCGCGCGGTGAGCATGGTGCCGGTGAAGCGGTTCCACGACCAGC TCAACGCCCAGGTGATCAGGCGGCTCAACAGCCTCGAGCCCGGTGCGTACTCCCGGCTGGGCGCGGCCATCCGGCACGGC TCGGCGATCTTGGAGGCGCGCGGCGGCACGTCGCGGCGGCTGTTGGTGGTGCTGTCCGACGGGCTGGCCTACGACCACGG ATACGAGCGGGCCTACGGTGCCGCGGATGCGCGCCGTGCGCTGACCGAGGCGCGCCGGCGGGGGACCGGCTGCGTGTGCC TGACCGTCGGCGCGGGGACCGACGTGCAGTCCCTGCGCCGGGTGTTCGGCACTACCGCGCACGCGACGATGGCGCGCCCC GATCAGCTGGCCGGGGTGATCGGTCCGCTGTTCCGCTCGGCCCTGCGCGCGGCGGAGGTCCGCCGCCGCACCGCCGCGAA CGCGCGTGCCGGTACCGCGACATCCCGCCGGCCGCACACATCGGCGCACGTGGGCGCCGGCTAA
Upstream 100 bases:
>100_bases GTCGGGGCGGATTCGAGGTCAATGACGCGACGCCGCGAGCGGCCGTCGGTGACACGGCGCCACCCGACGGTGAACTCAAT CATCATGTGCTCCCGACTCA
Downstream 100 bases:
>100_bases CAGAAGGGAAGCCATGGTCGACCAGTCCGGACTTGCATACGTCCACGCCGCCGAGGCGCGCCCGTACTACCGGGCGGTCG GAAGCGAGGAGGCCGTCTTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 607; Mature: 606
Protein sequence:
>607_residues MTAVQPDSTVGTDIWSTSRRLSMGDDACADQWQALGMLASALAGRAVAVAGLPPGEPAWTDGQTIYVDAGAPGALKSLAV QASMIAAGSLRPDVVGRLLRHRKLAQRYLTVEGHRALVANAPVLPRVLASLGDRGVAGRSDSPRASLALAAARVALPDPA PEFGVIRAGKVLAACGRAARPDQPDDKAAPAHVPRRDGAADLAELDDAAVDDSDDPDLFTSPVGGGGALGKWLKKLLSSA RKTGTGGGPPGADSPTHRTDSGKRGAYAVASLASAPADEGNDEDPADGVRYPEWDVARGSYRPAWCTVREVEPAITARAT LAVDDAIAVRRPLARLGMGLHRRHRQPQGDDIDIDAAVEARVEVRAGSVPDEAVYLDSLRRRRDLSVLLLLDVSGSAAEP GTVGRTVHEQQRAAVADLAVALHDLGDRVALYAYYSQGRRAVSMVPVKRFHDQLNAQVIRRLNSLEPGAYSRLGAAIRHG SAILEARGGTSRRLLVVLSDGLAYDHGYERAYGAADARRALTEARRRGTGCVCLTVGAGTDVQSLRRVFGTTAHATMARP DQLAGVIGPLFRSALRAAEVRRRTAANARAGTATSRRPHTSAHVGAG
Sequences:
>Translated_607_residues MTAVQPDSTVGTDIWSTSRRLSMGDDACADQWQALGMLASALAGRAVAVAGLPPGEPAWTDGQTIYVDAGAPGALKSLAV QASMIAAGSLRPDVVGRLLRHRKLAQRYLTVEGHRALVANAPVLPRVLASLGDRGVAGRSDSPRASLALAAARVALPDPA PEFGVIRAGKVLAACGRAARPDQPDDKAAPAHVPRRDGAADLAELDDAAVDDSDDPDLFTSPVGGGGALGKWLKKLLSSA RKTGTGGGPPGADSPTHRTDSGKRGAYAVASLASAPADEGNDEDPADGVRYPEWDVARGSYRPAWCTVREVEPAITARAT LAVDDAIAVRRPLARLGMGLHRRHRQPQGDDIDIDAAVEARVEVRAGSVPDEAVYLDSLRRRRDLSVLLLLDVSGSAAEP GTVGRTVHEQQRAAVADLAVALHDLGDRVALYAYYSQGRRAVSMVPVKRFHDQLNAQVIRRLNSLEPGAYSRLGAAIRHG SAILEARGGTSRRLLVVLSDGLAYDHGYERAYGAADARRALTEARRRGTGCVCLTVGAGTDVQSLRRVFGTTAHATMARP DQLAGVIGPLFRSALRAAEVRRRTAANARAGTATSRRPHTSAHVGAG >Mature_606_residues TAVQPDSTVGTDIWSTSRRLSMGDDACADQWQALGMLASALAGRAVAVAGLPPGEPAWTDGQTIYVDAGAPGALKSLAVQ ASMIAAGSLRPDVVGRLLRHRKLAQRYLTVEGHRALVANAPVLPRVLASLGDRGVAGRSDSPRASLALAAARVALPDPAP EFGVIRAGKVLAACGRAARPDQPDDKAAPAHVPRRDGAADLAELDDAAVDDSDDPDLFTSPVGGGGALGKWLKKLLSSAR KTGTGGGPPGADSPTHRTDSGKRGAYAVASLASAPADEGNDEDPADGVRYPEWDVARGSYRPAWCTVREVEPAITARATL AVDDAIAVRRPLARLGMGLHRRHRQPQGDDIDIDAAVEARVEVRAGSVPDEAVYLDSLRRRRDLSVLLLLDVSGSAAEPG TVGRTVHEQQRAAVADLAVALHDLGDRVALYAYYSQGRRAVSMVPVKRFHDQLNAQVIRRLNSLEPGAYSRLGAAIRHGS AILEARGGTSRRLLVVLSDGLAYDHGYERAYGAADARRALTEARRRGTGCVCLTVGAGTDVQSLRRVFGTTAHATMARPD QLAGVIGPLFRSALRAAEVRRRTAANARAGTATSRRPHTSAHVGAG
Specific function: Component of the anaerobic respiratory chain that transforms nitrate to dinitrogen (denitrification). Function unknown, but essential for the denitrification process [H]
COG id: COG4548
COG function: function code P; Nitric oxide reductase activation protein
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 VWFA domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002035 [H]
Pfam domain/function: PF00092 VWA [H]
EC number: NA
Molecular weight: Translated: 63663; Mature: 63532
Theoretical pI: Translated: 9.79; Mature: 9.79
Prosite motif: PS50234 VWFA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAVQPDSTVGTDIWSTSRRLSMGDDACADQWQALGMLASALAGRAVAVAGLPPGEPAWT CCCCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCC DGQTIYVDAGAPGALKSLAVQASMIAAGSLRPDVVGRLLRHRKLAQRYLTVEGHRALVAN CCCEEEEECCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEC APVLPRVLASLGDRGVAGRSDSPRASLALAAARVALPDPAPEFGVIRAGKVLAACGRAAR CCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCC PDQPDDKAAPAHVPRRDGAADLAELDDAAVDDSDDPDLFTSPVGGGGALGKWLKKLLSSA CCCCCCCCCCCCCCCCCCCHHHHHHCHHCCCCCCCCCCEECCCCCCHHHHHHHHHHHHHH RKTGTGGGPPGADSPTHRTDSGKRGAYAVASLASAPADEGNDEDPADGVRYPEWDVARGS HHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC YRPAWCTVREVEPAITARATLAVDDAIAVRRPLARLGMGLHRRHRQPQGDDIDIDAAVEA CCCCEEEHHHCCHHHHHEEEEEHHHHHHHHHHHHHHCHHHHHHCCCCCCCCCCCCHHEEE RVEVRAGSVPDEAVYLDSLRRRRDLSVLLLLDVSGSAAEPGTVGRTVHEQQRAAVADLAV EEEEECCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHH ALHDLGDRVALYAYYSQGRRAVSMVPVKRFHDQLNAQVIRRLNSLEPGAYSRLGAAIRHG HHHHCCCCEEEEEEHHCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCC SAILEARGGTSRRLLVVLSDGLAYDHGYERAYGAADARRALTEARRRGTGCVCLTVGAGT CCEEEECCCCCCEEEEEEECCCCCCCCHHHHHCHHHHHHHHHHHHHCCCCEEEEEECCCC DVQSLRRVFGTTAHATMARPDQLAGVIGPLFRSALRAAEVRRRTAANARAGTATSRRPHT CHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC SAHVGAG CCCCCCC >Mature Secondary Structure TAVQPDSTVGTDIWSTSRRLSMGDDACADQWQALGMLASALAGRAVAVAGLPPGEPAWT CCCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCC DGQTIYVDAGAPGALKSLAVQASMIAAGSLRPDVVGRLLRHRKLAQRYLTVEGHRALVAN CCCEEEEECCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEC APVLPRVLASLGDRGVAGRSDSPRASLALAAARVALPDPAPEFGVIRAGKVLAACGRAAR CCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCC PDQPDDKAAPAHVPRRDGAADLAELDDAAVDDSDDPDLFTSPVGGGGALGKWLKKLLSSA CCCCCCCCCCCCCCCCCCCHHHHHHCHHCCCCCCCCCCEECCCCCCHHHHHHHHHHHHHH RKTGTGGGPPGADSPTHRTDSGKRGAYAVASLASAPADEGNDEDPADGVRYPEWDVARGS HHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC YRPAWCTVREVEPAITARATLAVDDAIAVRRPLARLGMGLHRRHRQPQGDDIDIDAAVEA CCCCEEEHHHCCHHHHHEEEEEHHHHHHHHHHHHHHCHHHHHHCCCCCCCCCCCCHHEEE RVEVRAGSVPDEAVYLDSLRRRRDLSVLLLLDVSGSAAEPGTVGRTVHEQQRAAVADLAV EEEEECCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHH ALHDLGDRVALYAYYSQGRRAVSMVPVKRFHDQLNAQVIRRLNSLEPGAYSRLGAAIRHG HHHHCCCCEEEEEEHHCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCC SAILEARGGTSRRLLVVLSDGLAYDHGYERAYGAADARRALTEARRRGTGCVCLTVGAGT CCEEEECCCCCCEEEEEEECCCCCCCCHHHHHCHHHHHHHHHHHHHCCCCEEEEEECCCC DVQSLRRVFGTTAHATMARPDQLAGVIGPLFRSALRAAEVRRRTAANARAGTATSRRPHT CHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC SAHVGAG CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7711073; 10984043; 7664887 [H]