| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41408760
Identifier: 41408760
GI number: 41408760
Start: 2998560
End: 3000308
Strand: Reverse
Name: 41408760
Synonym: MAP2662c
Alternate gene names: NA
Gene position: 3000308-2998560 (Counterclockwise)
Preceding gene: 41408761
Following gene: 41408752
Centisome position: 62.12
GC content: 66.38
Gene sequence:
>1749_bases ATGGGATTTCTGAAGCCCGAGCTACCGCAGCTCGACATGGCCGAATGGAGCAAGGGCACCCGTAGCGACAAGATCCGCCC GATGGCCAAGCACTGGGCCGAGGTGGGCTTCGGCACCCCGGTCGCCCTGCACCTGTTCTACGTCGTCAAAATCCTGCTCT ACATCCTGGGCGGGTGGCTGTTCGCCTCGGCCACCCGGGGTCTCGGCGGCTTCACCCACGTCGCGTCGTGGTGGTCGGAG CCGATCGTCTTCGAAAAGGTCGTGCTCTACACGATGCTGTTCGAGGTGATCGGGCTGGGCTGCGGCTTCGGCCCGCTGAA CAACCGCTTCTTTCCGCCGATGGGCTCGATTCTGTACTGGATGCGCTTCGGCACCATCCGGCTGCCACCGTGGCCGGACC GGGTCCCGTTCACCGCGGGCACCAAACGCAAGCCGGTCGACGTCGCGCTGTACGCGCTGTTTCTGCTGCTGACGCTGGCC GCGCTGTTCGCCGACGGCACCGGGCCCGTGCCCGAGCTGGGCACCACGATCGGCCTGCTGCCCGCCTGGAAGATCGTGCT GATCCTGCTGGTGCTGGCGGTGCTGGGGCTGCGCGACAAGGTGATCTTCCTGGCCGCCCGCGGCGAGGTCTACGCCAGCA TGGCGGTGACGTTCCTGTTCGGGGCGCCCGACATGATCGTCGGGTCCAAGGTGGTCTTCCTGGTGATCTGGATGGGCGCG GCGACATCCAAACTCAACAAACACTTTCCGTTCGTGATCTCCACGATGATGTCCAACAACCCGCTGGTGCGCCCGCGCTG GCTGAAGCGGAGGTTCTTCGAGAAGTTCCCCGACGATCTGCGGCCCGGCCGGCTGTCACGCTGGATCGCGCATCTGAGCA CCGCGATCGAGATGCTGGTGCCGTTGCCGCTGTTCTTCTGTCACGGCGGCTGGCCGGTCACCGTGGCCGCGGTGGTGATG GTGTGCTTCCACCTGGGGATCCTGGTCTCGATTCCGATGGGCGTGCCGCTGGAATGGAACGTGTTCATGATCTTCGGGGT GCTGTCGCTGTTCGTGGCGCACACCGGGATCGGGCTCGGCGACCTTCGGCACCCCGTGGTGGTGGCCGTCCTGTTCGTCG TCATCGCGGGAATCGTGGTGTTGGGCAACATGTTTCCGCGCAAGATCTCGTTTCTGCCCGGGATGCGCTACTACGCCGGC AACTGGGACACCACGCTGTGGTGCATCAAACCGTCGGCCAGCGAGAAGATCAGCCGCGGCATCGTCGCCATCGCCAGCAT GCCCCAGGCCCAGCTGGAGCGGTTCTACGGCAGCCCGGAGGCGGCGCAGATCCCGCTCTACATGGGATATGCGTTCCGCG GCTTCAACACTCACGGCCGGGCGCTGTTCACGCTGGCGCACCGGGCGATGGCGGGCCAGAACGAGGACGACTACGTCATC ACCGACGGCGAGCGGATCTGCAGCACCGCGATCGGCTGGAACTTCGGCGACGGCCACATGCACAACGAGCAGCTGATCGC CGCGCTGCAGGAGCGCTGCCACTTCGAGCCGGGCGAGGTGCGGGTGGTGCTGCTCGACGCGCAGCCCATTCACAAGCAGA CGCAGGCCTACCGGCTGGTCGACGCGGCCACCGGTGAGTTCGAGCGCGGCATCGTGCGGGTCGCCGACATGGTCGTGCGG CAACCCTGGGACGACGACGTCCCCGTGCAGGTGGTGTCGGACGACGCGCCGAGCGTCACGCCAGAGTGA
Upstream 100 bases:
>100_bases CGCTCGACGCCGCGGCCGGGGCCTCGGCCGCGCCCGGGTGTCGCCGCGTTGCCCGAGGTTGCCGGGCGTGTTCCTAGAAC GCGTTCTAGTCTTTGACACC
Downstream 100 bases:
>100_bases CGCCGAAGCCCGAGCGTCACGCTGGCGTGACGCTCGGGCTTCGGCGGCTCAGACCCCGGCCCGAACCTCGTGGGCCGCGG CGACCATGTTCTTCAGCGAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 582; Mature: 581
Protein sequence:
>582_residues MGFLKPELPQLDMAEWSKGTRSDKIRPMAKHWAEVGFGTPVALHLFYVVKILLYILGGWLFASATRGLGGFTHVASWWSE PIVFEKVVLYTMLFEVIGLGCGFGPLNNRFFPPMGSILYWMRFGTIRLPPWPDRVPFTAGTKRKPVDVALYALFLLLTLA ALFADGTGPVPELGTTIGLLPAWKIVLILLVLAVLGLRDKVIFLAARGEVYASMAVTFLFGAPDMIVGSKVVFLVIWMGA ATSKLNKHFPFVISTMMSNNPLVRPRWLKRRFFEKFPDDLRPGRLSRWIAHLSTAIEMLVPLPLFFCHGGWPVTVAAVVM VCFHLGILVSIPMGVPLEWNVFMIFGVLSLFVAHTGIGLGDLRHPVVVAVLFVVIAGIVVLGNMFPRKISFLPGMRYYAG NWDTTLWCIKPSASEKISRGIVAIASMPQAQLERFYGSPEAAQIPLYMGYAFRGFNTHGRALFTLAHRAMAGQNEDDYVI TDGERICSTAIGWNFGDGHMHNEQLIAALQERCHFEPGEVRVVLLDAQPIHKQTQAYRLVDAATGEFERGIVRVADMVVR QPWDDDVPVQVVSDDAPSVTPE
Sequences:
>Translated_582_residues MGFLKPELPQLDMAEWSKGTRSDKIRPMAKHWAEVGFGTPVALHLFYVVKILLYILGGWLFASATRGLGGFTHVASWWSE PIVFEKVVLYTMLFEVIGLGCGFGPLNNRFFPPMGSILYWMRFGTIRLPPWPDRVPFTAGTKRKPVDVALYALFLLLTLA ALFADGTGPVPELGTTIGLLPAWKIVLILLVLAVLGLRDKVIFLAARGEVYASMAVTFLFGAPDMIVGSKVVFLVIWMGA ATSKLNKHFPFVISTMMSNNPLVRPRWLKRRFFEKFPDDLRPGRLSRWIAHLSTAIEMLVPLPLFFCHGGWPVTVAAVVM VCFHLGILVSIPMGVPLEWNVFMIFGVLSLFVAHTGIGLGDLRHPVVVAVLFVVIAGIVVLGNMFPRKISFLPGMRYYAG NWDTTLWCIKPSASEKISRGIVAIASMPQAQLERFYGSPEAAQIPLYMGYAFRGFNTHGRALFTLAHRAMAGQNEDDYVI TDGERICSTAIGWNFGDGHMHNEQLIAALQERCHFEPGEVRVVLLDAQPIHKQTQAYRLVDAATGEFERGIVRVADMVVR QPWDDDVPVQVVSDDAPSVTPE >Mature_581_residues GFLKPELPQLDMAEWSKGTRSDKIRPMAKHWAEVGFGTPVALHLFYVVKILLYILGGWLFASATRGLGGFTHVASWWSEP IVFEKVVLYTMLFEVIGLGCGFGPLNNRFFPPMGSILYWMRFGTIRLPPWPDRVPFTAGTKRKPVDVALYALFLLLTLAA LFADGTGPVPELGTTIGLLPAWKIVLILLVLAVLGLRDKVIFLAARGEVYASMAVTFLFGAPDMIVGSKVVFLVIWMGAA TSKLNKHFPFVISTMMSNNPLVRPRWLKRRFFEKFPDDLRPGRLSRWIAHLSTAIEMLVPLPLFFCHGGWPVTVAAVVMV CFHLGILVSIPMGVPLEWNVFMIFGVLSLFVAHTGIGLGDLRHPVVVAVLFVVIAGIVVLGNMFPRKISFLPGMRYYAGN WDTTLWCIKPSASEKISRGIVAIASMPQAQLERFYGSPEAAQIPLYMGYAFRGFNTHGRALFTLAHRAMAGQNEDDYVIT DGERICSTAIGWNFGDGHMHNEQLIAALQERCHFEPGEVRVVLLDAQPIHKQTQAYRLVDAATGEFERGIVRVADMVVRQ PWDDDVPVQVVSDDAPSVTPE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 64671; Mature: 64540
Theoretical pI: Translated: 8.74; Mature: 8.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGFLKPELPQLDMAEWSKGTRSDKIRPMAKHWAEVGFGTPVALHLFYVVKILLYILGGWL CCCCCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH FASATRGLGGFTHVASWWSEPIVFEKVVLYTMLFEVIGLGCGFGPLNNRFFPPMGSILYW HHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHH MRFGTIRLPPWPDRVPFTAGTKRKPVDVALYALFLLLTLAALFADGTGPVPELGTTIGLL HHHCCEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH PAWKIVLILLVLAVLGLRDKVIFLAARGEVYASMAVTFLFGAPDMIVGSKVVFLVIWMGA HHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHH ATSKLNKHFPFVISTMMSNNPLVRPRWLKRRFFEKFPDDLRPGRLSRWIAHLSTAIEMLV HHHHHHCCCCHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH PLPLFFCHGGWPVTVAAVVMVCFHLGILVSIPMGVPLEWNVFMIFGVLSLFVAHTGIGLG HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCH DLRHPVVVAVLFVVIAGIVVLGNMFPRKISFLPGMRYYAGNWDTTLWCIKPSASEKISRG HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCEECCCCCCEEEEECCCHHHHHHHC IVAIASMPQAQLERFYGSPEAAQIPLYMGYAFRGFNTHGRALFTLAHRAMAGQNEDDYVI CHHHHCCCHHHHHHHCCCCCCCCCEEEECEEEECCCCCCHHHHHHHHHHHCCCCCCCEEE TDGERICSTAIGWNFGDGHMHNEQLIAALQERCHFEPGEVRVVLLDAQPIHKQTQAYRLV ECCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHH DAATGEFERGIVRVADMVVRQPWDDDVPVQVVSDDAPSVTPE HHHCCHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCC >Mature Secondary Structure GFLKPELPQLDMAEWSKGTRSDKIRPMAKHWAEVGFGTPVALHLFYVVKILLYILGGWL CCCCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH FASATRGLGGFTHVASWWSEPIVFEKVVLYTMLFEVIGLGCGFGPLNNRFFPPMGSILYW HHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHH MRFGTIRLPPWPDRVPFTAGTKRKPVDVALYALFLLLTLAALFADGTGPVPELGTTIGLL HHHCCEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH PAWKIVLILLVLAVLGLRDKVIFLAARGEVYASMAVTFLFGAPDMIVGSKVVFLVIWMGA HHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHH ATSKLNKHFPFVISTMMSNNPLVRPRWLKRRFFEKFPDDLRPGRLSRWIAHLSTAIEMLV HHHHHHCCCCHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH PLPLFFCHGGWPVTVAAVVMVCFHLGILVSIPMGVPLEWNVFMIFGVLSLFVAHTGIGLG HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCH DLRHPVVVAVLFVVIAGIVVLGNMFPRKISFLPGMRYYAGNWDTTLWCIKPSASEKISRG HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCEECCCCCCEEEEECCCHHHHHHHC IVAIASMPQAQLERFYGSPEAAQIPLYMGYAFRGFNTHGRALFTLAHRAMAGQNEDDYVI CHHHHCCCHHHHHHHCCCCCCCCCEEEECEEEECCCCCCHHHHHHHHHHHCCCCCCCEEE TDGERICSTAIGWNFGDGHMHNEQLIAALQERCHFEPGEVRVVLLDAQPIHKQTQAYRLV ECCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHH DAATGEFERGIVRVADMVVRQPWDDDVPVQVVSDDAPSVTPE HHHCCHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA