| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41408749
Identifier: 41408749
GI number: 41408749
Start: 2984720
End: 2985865
Strand: Reverse
Name: 41408749
Synonym: MAP2651c
Alternate gene names: NA
Gene position: 2985865-2984720 (Counterclockwise)
Preceding gene: 41408750
Following gene: 41408748
Centisome position: 61.82
GC content: 65.45
Gene sequence:
>1146_bases ATGTCGACCGAACAGACCACTTCGCCTGCGGCACAACGGGAATCGGCCGCCCCGCGGCGAACCGGCACACGCGGCTGGGG CGGCTGGGTGGCCGGCGCCGGCTTGGCGGCGTTCGCGCTCTTCTTCATCGCGAACTGCCGCGTCGCGCTGGATCCGCGGG TGGCCGACCCGAACGTGCAGGGCCGTCCGCGCCCGGTGAAGTTCATCTTCGGCCTGGATTACATGACGTTCATCCAGATC TCCACCGTGGTCATGCTGATCGTGTTGGTGGTGGTCTTCGTCAGGGGATGGCGCCGCAACCCGGGCAGCCCGGCGATGCT GATGTTCCTGTGCACCACCCTGATCGTGTGGCAGGACCCGATCATGAACTGGGCGCCGTTCGCGGTGTACAACCCCGACC TGATCCACTGGCCGGAATCCTGGCCGCTGGTGTCGTTGTCGCCGACGGTGGAGCCGTTCGTCGTATTCGGTTACGTGACT TTCTATTTCGGACCGTACTTCCCGGCGGTGTGGATTCTGCGCAGGCTTCAGGCCAAGTACGGCCCGCAGTCGTTCTTCGC GCGGCACCCGCTGGTCAGCCTGGGCGTGCTGACCTGCGCGATCGGTTTCGTCTTCGACGCCTGGCTGGAGATCCAGCTGG TCCACATGGGCATGTACATCTATTCACAGGTCATCCCCTGGGGTTCGGTGTTCACCGGCACCACCTTCCAGTTCCCGCTG ATCTGGGAGTCGTTCTCGGTGACCTTCGTGATGGTCCCGGCCGCGATCCTGTGCTATCGCGACGACACCGGCAAATCGGT GGCCGAAAAGCTGGCCGCCAAAGCCAAACTCTTCCCGGCGCGGCCGGTGCTCGGCACCTTCCTGGTGATGTTCGTCATCA TCAACGTGTCCTACTTCGCCTACGGGGCGTGGTTCGCCGTCATCAAGGCCACCAAGGCGGCGACCTCCGTCGCCTGCCCC TGGCCGTATCCGGAAGCCAAAGTCTATGACCCACAGGGATTTTACGAGAAGGCCGGCGCGCAGGGCCCATACTCGGTCGG CATCTGGTCGACCTGGATGAGCGGGCAACCCCACGGCCGGCCCGACGTGCAGCCGCCACCACCCGGTGCGGGCGCCTGCG CGACCACCGCGGTCGGGCATGGCTGA
Upstream 100 bases:
>100_bases CGCGCCTGGATGGGCGCCGGGTATCTGGTGGCCAGAACCCTCGACGCCGACGGCGTCAACTCGCATCTGGTCGATCGTTT CGGAGAGGAAGGTTGACCTG
Downstream 100 bases:
>100_bases GCCGCGCAGCGTCGTCATCACCGGCGCATCCCGCGGACTGGGGTTCGCCTCCGCGCTGCGGATGTATCGCGAAGGGTGGC GGGTGGTCGCCGCCATGCGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 381; Mature: 380
Protein sequence:
>381_residues MSTEQTTSPAAQRESAAPRRTGTRGWGGWVAGAGLAAFALFFIANCRVALDPRVADPNVQGRPRPVKFIFGLDYMTFIQI STVVMLIVLVVVFVRGWRRNPGSPAMLMFLCTTLIVWQDPIMNWAPFAVYNPDLIHWPESWPLVSLSPTVEPFVVFGYVT FYFGPYFPAVWILRRLQAKYGPQSFFARHPLVSLGVLTCAIGFVFDAWLEIQLVHMGMYIYSQVIPWGSVFTGTTFQFPL IWESFSVTFVMVPAAILCYRDDTGKSVAEKLAAKAKLFPARPVLGTFLVMFVIINVSYFAYGAWFAVIKATKAATSVACP WPYPEAKVYDPQGFYEKAGAQGPYSVGIWSTWMSGQPHGRPDVQPPPPGAGACATTAVGHG
Sequences:
>Translated_381_residues MSTEQTTSPAAQRESAAPRRTGTRGWGGWVAGAGLAAFALFFIANCRVALDPRVADPNVQGRPRPVKFIFGLDYMTFIQI STVVMLIVLVVVFVRGWRRNPGSPAMLMFLCTTLIVWQDPIMNWAPFAVYNPDLIHWPESWPLVSLSPTVEPFVVFGYVT FYFGPYFPAVWILRRLQAKYGPQSFFARHPLVSLGVLTCAIGFVFDAWLEIQLVHMGMYIYSQVIPWGSVFTGTTFQFPL IWESFSVTFVMVPAAILCYRDDTGKSVAEKLAAKAKLFPARPVLGTFLVMFVIINVSYFAYGAWFAVIKATKAATSVACP WPYPEAKVYDPQGFYEKAGAQGPYSVGIWSTWMSGQPHGRPDVQPPPPGAGACATTAVGHG >Mature_380_residues STEQTTSPAAQRESAAPRRTGTRGWGGWVAGAGLAAFALFFIANCRVALDPRVADPNVQGRPRPVKFIFGLDYMTFIQIS TVVMLIVLVVVFVRGWRRNPGSPAMLMFLCTTLIVWQDPIMNWAPFAVYNPDLIHWPESWPLVSLSPTVEPFVVFGYVTF YFGPYFPAVWILRRLQAKYGPQSFFARHPLVSLGVLTCAIGFVFDAWLEIQLVHMGMYIYSQVIPWGSVFTGTTFQFPLI WESFSVTFVMVPAAILCYRDDTGKSVAEKLAAKAKLFPARPVLGTFLVMFVIINVSYFAYGAWFAVIKATKAATSVACPW PYPEAKVYDPQGFYEKAGAQGPYSVGIWSTWMSGQPHGRPDVQPPPPGAGACATTAVGHG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42096; Mature: 41965
Theoretical pI: Translated: 9.24; Mature: 9.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTEQTTSPAAQRESAAPRRTGTRGWGGWVAGAGLAAFALFFIANCRVALDPRVADPNVQ CCCCCCCCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCC GRPRPVKFIFGLDYMTFIQISTVVMLIVLVVVFVRGWRRNPGSPAMLMFLCTTLIVWQDP CCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCC IMNWAPFAVYNPDLIHWPESWPLVSLSPTVEPFVVFGYVTFYFGPYFPAVWILRRLQAKY CCCCCCCEEECCCEEECCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GPQSFFARHPLVSLGVLTCAIGFVFDAWLEIQLVHMGMYIYSQVIPWGSVFTGTTFQFPL CCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEE IWESFSVTFVMVPAAILCYRDDTGKSVAEKLAAKAKLFPARPVLGTFLVMFVIINVSYFA EECCCCHHHHEECHHHEEEECCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH YGAWFAVIKATKAATSVACPWPYPEAKVYDPQGFYEKAGAQGPYSVGIWSTWMSGQPHGR HHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCHHHHCCCCCCCEEEEEHHHCCCCCCCC PDVQPPPPGAGACATTAVGHG CCCCCCCCCCCCHHHHCCCCC >Mature Secondary Structure STEQTTSPAAQRESAAPRRTGTRGWGGWVAGAGLAAFALFFIANCRVALDPRVADPNVQ CCCCCCCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCC GRPRPVKFIFGLDYMTFIQISTVVMLIVLVVVFVRGWRRNPGSPAMLMFLCTTLIVWQDP CCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCC IMNWAPFAVYNPDLIHWPESWPLVSLSPTVEPFVVFGYVTFYFGPYFPAVWILRRLQAKY CCCCCCCEEECCCEEECCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GPQSFFARHPLVSLGVLTCAIGFVFDAWLEIQLVHMGMYIYSQVIPWGSVFTGTTFQFPL CCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEE IWESFSVTFVMVPAAILCYRDDTGKSVAEKLAAKAKLFPARPVLGTFLVMFVIINVSYFA EECCCCHHHHEECHHHEEEECCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH YGAWFAVIKATKAATSVACPWPYPEAKVYDPQGFYEKAGAQGPYSVGIWSTWMSGQPHGR HHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCHHHHCCCCCCCEEEEEHHHCCCCCCCC PDVQPPPPGAGACATTAVGHG CCCCCCCCCCCCHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA