| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41408750
Identifier: 41408750
GI number: 41408750
Start: 2985870
End: 2986988
Strand: Reverse
Name: 41408750
Synonym: MAP2652c
Alternate gene names: NA
Gene position: 2986988-2985870 (Counterclockwise)
Preceding gene: 41408751
Following gene: 41408749
Centisome position: 61.85
GC content: 65.95
Gene sequence:
>1119_bases ATGTCCTACGAAAGCAGCGCTGAGCCGATCAAGGTCGGCTATCTGATGGACTTCGCCCTGCCGCCGGGGTTCCCCGAGGA GATGAAGGCCGACTTCACCCGCTGTTTCGACCTCGTCTTCGCCGAGGCCGCCGAGCAGGGCGTGCTGGACCGACCGGTCC AGATGATCTACCGCGAGGTGGAGGGCCTGCCCAAAGGATCGGTCAAAGCGGTCATCGACGCCTTCGGCGAACTCGTCGAC GAGGGCTGCCTGGTGGTGTTCGGGCCGCACATCACCGACAACTGCGTGCCCACCCGCGAGGCGATCGAAGAGCGGTTCAA GGTGCCGGCGCTCAGCGTCACCGGCACCGACGACTGGCTGGGTGAATGGACCTTCTCCTTCCCGCAGGGGTCGATGACCG ACGAGCCGATCTTCATCGCGGATCTCGTTGCCAAGCGCGGACTTTCCGAGATCGGAGTGCTCGTCGAGCAGAACCTGATC GGCGAAAGCTACCTGAAGAACCTGCGCAGCGCCTGCCGGCGCAAGGGCATTCGCATCGTCGCCGAGGCGGCCATCGCGCA AATCGCGCAGGACATCAACGAGGCCGTGCGCACGCTGCACGACGCCAAGTCCGAGGCGATCGTGCACCTGGGTTTCGGGT TCGGCATCGTGTTCATCAATCCGGCACTGCAGGCGGTCGATTGGGATCCGCCGCGCTTCACCACCACCGCCTTCCAGAAC GCCTGGGTCAACCCGATCATGTGGAACGCCTTCATGGGCTGGGTCGGCGTCGACCAATACGACGAGGACAACCGGATCGG GCAGGACTTCCTCGACCGGTACGCCGCAAAGTACGGGGGCCGGCGGCCGGAATATTGCGTGCCGGTGGTCAACTGCGACG TCGCCGCCACCCTGGTGCGGGCCTTCGCCGATGCGCATCCGCTCAGCCCGCGCGGGGTCAAGGAGGCGCTGGAGCGGGTG AAGATGATGCCGGCGGCCTCCGGTGCGCCCGGCACCCGGGTGTCGTTCGGCAAGTGGACGCGACGCGCCTGGATGGGCGC CGGGTATCTGGTGGCCAGAACCCTCGACGCCGACGGCGTCAACTCGCATCTGGTCGATCGTTTCGGAGAGGAAGGTTGA
Upstream 100 bases:
>100_bases CTCGGGTCCGATGATTGACGCTGCATACCGCCCCCGCTAGGGTCTGAACAAATATTAGGTTTACAGACCGGCGCGCGCGA ATTTGTCCTTGGGAGGTCAG
Downstream 100 bases:
>100_bases CCTGATGTCGACCGAACAGACCACTTCGCCTGCGGCACAACGGGAATCGGCCGCCCCGCGGCGAACCGGCACACGCGGCT GGGGCGGCTGGGTGGCCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 372; Mature: 371
Protein sequence:
>372_residues MSYESSAEPIKVGYLMDFALPPGFPEEMKADFTRCFDLVFAEAAEQGVLDRPVQMIYREVEGLPKGSVKAVIDAFGELVD EGCLVVFGPHITDNCVPTREAIEERFKVPALSVTGTDDWLGEWTFSFPQGSMTDEPIFIADLVAKRGLSEIGVLVEQNLI GESYLKNLRSACRRKGIRIVAEAAIAQIAQDINEAVRTLHDAKSEAIVHLGFGFGIVFINPALQAVDWDPPRFTTTAFQN AWVNPIMWNAFMGWVGVDQYDEDNRIGQDFLDRYAAKYGGRRPEYCVPVVNCDVAATLVRAFADAHPLSPRGVKEALERV KMMPAASGAPGTRVSFGKWTRRAWMGAGYLVARTLDADGVNSHLVDRFGEEG
Sequences:
>Translated_372_residues MSYESSAEPIKVGYLMDFALPPGFPEEMKADFTRCFDLVFAEAAEQGVLDRPVQMIYREVEGLPKGSVKAVIDAFGELVD EGCLVVFGPHITDNCVPTREAIEERFKVPALSVTGTDDWLGEWTFSFPQGSMTDEPIFIADLVAKRGLSEIGVLVEQNLI GESYLKNLRSACRRKGIRIVAEAAIAQIAQDINEAVRTLHDAKSEAIVHLGFGFGIVFINPALQAVDWDPPRFTTTAFQN AWVNPIMWNAFMGWVGVDQYDEDNRIGQDFLDRYAAKYGGRRPEYCVPVVNCDVAATLVRAFADAHPLSPRGVKEALERV KMMPAASGAPGTRVSFGKWTRRAWMGAGYLVARTLDADGVNSHLVDRFGEEG >Mature_371_residues SYESSAEPIKVGYLMDFALPPGFPEEMKADFTRCFDLVFAEAAEQGVLDRPVQMIYREVEGLPKGSVKAVIDAFGELVDE GCLVVFGPHITDNCVPTREAIEERFKVPALSVTGTDDWLGEWTFSFPQGSMTDEPIFIADLVAKRGLSEIGVLVEQNLIG ESYLKNLRSACRRKGIRIVAEAAIAQIAQDINEAVRTLHDAKSEAIVHLGFGFGIVFINPALQAVDWDPPRFTTTAFQNA WVNPIMWNAFMGWVGVDQYDEDNRIGQDFLDRYAAKYGGRRPEYCVPVVNCDVAATLVRAFADAHPLSPRGVKEALERVK MMPAASGAPGTRVSFGKWTRRAWMGAGYLVARTLDADGVNSHLVDRFGEEG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41049; Mature: 40918
Theoretical pI: Translated: 4.63; Mature: 4.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSYESSAEPIKVGYLMDFALPPGFPEEMKADFTRCFDLVFAEAAEQGVLDRPVQMIYREV CCCCCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH EGLPKGSVKAVIDAFGELVDEGCLVVFGPHITDNCVPTREAIEERFKVPALSVTGTDDWL CCCCCCHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCHHHHHHHHCCCEEEECCCCCCC GEWTFSFPQGSMTDEPIFIADLVAKRGLSEIGVLVEQNLIGESYLKNLRSACRRKGIRIV CCEEEECCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH AEAAIAQIAQDINEAVRTLHDAKSEAIVHLGFGFGIVFINPALQAVDWDPPRFTTTAFQN HHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCEEEEECCHHHHCCCCCCCCCHHHHHH AWVNPIMWNAFMGWVGVDQYDEDNRIGQDFLDRYAAKYGGRRPEYCVPVVNCDVAATLVR CCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHH AFADAHPLSPRGVKEALERVKMMPAASGAPGTRVSFGKWTRRAWMGAGYLVARTLDADGV HHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEECCCCCC NSHLVDRFGEEG HHHHHHHCCCCC >Mature Secondary Structure SYESSAEPIKVGYLMDFALPPGFPEEMKADFTRCFDLVFAEAAEQGVLDRPVQMIYREV CCCCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH EGLPKGSVKAVIDAFGELVDEGCLVVFGPHITDNCVPTREAIEERFKVPALSVTGTDDWL CCCCCCHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCHHHHHHHHCCCEEEECCCCCCC GEWTFSFPQGSMTDEPIFIADLVAKRGLSEIGVLVEQNLIGESYLKNLRSACRRKGIRIV CCEEEECCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH AEAAIAQIAQDINEAVRTLHDAKSEAIVHLGFGFGIVFINPALQAVDWDPPRFTTTAFQN HHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCEEEEECCHHHHCCCCCCCCCHHHHHH AWVNPIMWNAFMGWVGVDQYDEDNRIGQDFLDRYAAKYGGRRPEYCVPVVNCDVAATLVR CCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHH AFADAHPLSPRGVKEALERVKMMPAASGAPGTRVSFGKWTRRAWMGAGYLVARTLDADGV HHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEECCCCCC NSHLVDRFGEEG HHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA