Definition Mycobacterium avium subsp. paratuberculosis K-10, complete genome.
Accession NC_002944
Length 4,829,781

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The map label for this gene is yusZ [H]

Identifier: 41408748

GI number: 41408748

Start: 2983702

End: 2984727

Strand: Reverse

Name: yusZ [H]

Synonym: MAP2650c

Alternate gene names: 41408748

Gene position: 2984727-2983702 (Counterclockwise)

Preceding gene: 41408749

Following gene: 41408747

Centisome position: 61.8

GC content: 71.54

Gene sequence:

>1026_bases
ATGGCTGAGCCGCGCAGCGTCGTCATCACCGGCGCATCCCGCGGACTGGGGTTCGCCTCCGCGCTGCGGATGTATCGCGA
AGGGTGGCGGGTGGTCGCCGCCATGCGAACACCGGATCAGGGAATGCCCCTGTTGCGCCGGGCCATTCGCGACGGCACCG
GGCAGGACCCCGACGACGACCGGTTGATCGGCGTACAGCTCGATCTGACCGACAGCGCGTCGGTCGCCGCGGCCGCCAAG
GCCATCGAGGAAGCCGTGGGCGCACCGTCTGCGATAGTGCACAACGCCGGGATCTCGGCCGCCGGAATGGTGGAGGAGAC
CGATACGGCGTTGTGGCAGCGGATGTTCGCCACCAGCGTGCTGGGCCCGGTTGCGCTCACCCAGGCCCTGTTGCCGTCCA
TGCGGGCCGCCGGGCGGGGGCGGATCGTCCTGGTGTCCAGCGCGGCCGGGGTTCGCGGCCAGCCCGGCACCGCGCCGTAC
TCGGCGGCCAAGGGGGCGCTGGAACGGTGGGGCGAATCGCTGGCGGGCGAGATCGCGCCGTTCGGTTTGGGGGTGACGGT
GTTGGTGGCCGGCACCTATGACACCGAGATCATCACCGACGCCGGCACCACCGACGACCGCAACTTCAGCGGCCCCTATG
CCCGCCTGCACACCACCATGAACACCCGCGGGCGCTTGGCGGTCAGTTTCGCCCGGCGGCCCGAGCGGTTCACCGACGGC
CTGTACAAGGCGCTGGACGACCGGGCGCCGTTCCGCCGCCGCGGGGTCGGCCCCGACGCGTCGGTGTTGTTGGCCGCCAA
CAGGATCCTGCCGGCGTCGGGCATGCACCACCTGTCGCGGGTGGTGCTGGGCATACCGCGTCAGGGATCGATGCGGGACG
GGGCGTGGCCGCTGACGCACGGCCAGCGGGCCATGGTGTTGGTGGCGCGGGTGCTTCCGCAGCCGGTGTTGCAGCGCCTG
GCCGCGCTGGCCGGGCGGTTCTCGTCACCGAAAAGCGCGGCACGTCAAGGGGATCAAGAGGGGTAA

Upstream 100 bases:

>100_bases
GGCATCTGGTCGACCTGGATGAGCGGGCAACCCCACGGCCGGCCCGACGTGCAGCCGCCACCACCCGGTGCGGGCGCCTG
CGCGACCACCGCGGTCGGGC

Downstream 100 bases:

>100_bases
TCATGGAGCAACTTTTCGACGACCTGGAAGACTTCGGCGCCTTCGACGACGCGGTCTCCGGGGACGTGCGCGACCCGTAC
ACCGAATTGGCCCGGCTGCG

Product: hypothetical protein

Products: NA

Alternate protein names: ORFA [H]

Number of amino acids: Translated: 341; Mature: 340

Protein sequence:

>341_residues
MAEPRSVVITGASRGLGFASALRMYREGWRVVAAMRTPDQGMPLLRRAIRDGTGQDPDDDRLIGVQLDLTDSASVAAAAK
AIEEAVGAPSAIVHNAGISAAGMVEETDTALWQRMFATSVLGPVALTQALLPSMRAAGRGRIVLVSSAAGVRGQPGTAPY
SAAKGALERWGESLAGEIAPFGLGVTVLVAGTYDTEIITDAGTTDDRNFSGPYARLHTTMNTRGRLAVSFARRPERFTDG
LYKALDDRAPFRRRGVGPDASVLLAANRILPASGMHHLSRVVLGIPRQGSMRDGAWPLTHGQRAMVLVARVLPQPVLQRL
AALAGRFSSPKSAARQGDQEG

Sequences:

>Translated_341_residues
MAEPRSVVITGASRGLGFASALRMYREGWRVVAAMRTPDQGMPLLRRAIRDGTGQDPDDDRLIGVQLDLTDSASVAAAAK
AIEEAVGAPSAIVHNAGISAAGMVEETDTALWQRMFATSVLGPVALTQALLPSMRAAGRGRIVLVSSAAGVRGQPGTAPY
SAAKGALERWGESLAGEIAPFGLGVTVLVAGTYDTEIITDAGTTDDRNFSGPYARLHTTMNTRGRLAVSFARRPERFTDG
LYKALDDRAPFRRRGVGPDASVLLAANRILPASGMHHLSRVVLGIPRQGSMRDGAWPLTHGQRAMVLVARVLPQPVLQRL
AALAGRFSSPKSAARQGDQEG
>Mature_340_residues
AEPRSVVITGASRGLGFASALRMYREGWRVVAAMRTPDQGMPLLRRAIRDGTGQDPDDDRLIGVQLDLTDSASVAAAAKA
IEEAVGAPSAIVHNAGISAAGMVEETDTALWQRMFATSVLGPVALTQALLPSMRAAGRGRIVLVSSAAGVRGQPGTAPYS
AAKGALERWGESLAGEIAPFGLGVTVLVAGTYDTEIITDAGTTDDRNFSGPYARLHTTMNTRGRLAVSFARRPERFTDGL
YKALDDRAPFRRRGVGPDASVLLAANRILPASGMHHLSRVVLGIPRQGSMRDGAWPLTHGQRAMVLVARVLPQPVLQRLA
ALAGRFSSPKSAARQGDQEG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI20149619, Length=199, Percent_Identity=35.1758793969849, Blast_Score=102, Evalue=4e-22,
Organism=Homo sapiens, GI7657478, Length=199, Percent_Identity=32.1608040201005, Blast_Score=92, Evalue=5e-19,
Organism=Homo sapiens, GI44680136, Length=201, Percent_Identity=30.3482587064677, Blast_Score=91, Evalue=1e-18,
Organism=Homo sapiens, GI44680133, Length=201, Percent_Identity=30.3482587064677, Blast_Score=91, Evalue=1e-18,
Organism=Homo sapiens, GI17738292, Length=201, Percent_Identity=30.3482587064677, Blast_Score=91, Evalue=1e-18,
Organism=Homo sapiens, GI7706318, Length=196, Percent_Identity=29.5918367346939, Blast_Score=90, Evalue=3e-18,
Organism=Homo sapiens, GI4503817, Length=183, Percent_Identity=29.5081967213115, Blast_Score=90, Evalue=4e-18,
Organism=Homo sapiens, GI223718074, Length=253, Percent_Identity=30.0395256916996, Blast_Score=85, Evalue=9e-17,
Organism=Homo sapiens, GI50726952, Length=301, Percent_Identity=28.9036544850498, Blast_Score=77, Evalue=3e-14,
Organism=Homo sapiens, GI19743808, Length=285, Percent_Identity=28.7719298245614, Blast_Score=75, Evalue=6e-14,
Organism=Homo sapiens, GI150247226, Length=201, Percent_Identity=35.3233830845771, Blast_Score=73, Evalue=4e-13,
Organism=Homo sapiens, GI119392083, Length=211, Percent_Identity=29.3838862559242, Blast_Score=71, Evalue=1e-12,
Organism=Homo sapiens, GI157739938, Length=187, Percent_Identity=27.2727272727273, Blast_Score=71, Evalue=1e-12,
Organism=Homo sapiens, GI32483357, Length=198, Percent_Identity=27.2727272727273, Blast_Score=69, Evalue=5e-12,
Organism=Homo sapiens, GI22507405, Length=197, Percent_Identity=29.4416243654822, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI40254992, Length=196, Percent_Identity=27.5510204081633, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI146231950, Length=150, Percent_Identity=35.3333333333333, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI5031737, Length=203, Percent_Identity=29.5566502463054, Blast_Score=66, Evalue=6e-11,
Organism=Escherichia coli, GI1786701, Length=276, Percent_Identity=29.7101449275362, Blast_Score=100, Evalue=2e-22,
Organism=Escherichia coli, GI1787335, Length=205, Percent_Identity=30.7317073170732, Blast_Score=81, Evalue=1e-16,
Organism=Escherichia coli, GI1790717, Length=202, Percent_Identity=22.2772277227723, Blast_Score=62, Evalue=6e-11,
Organism=Escherichia coli, GI1786812, Length=202, Percent_Identity=26.7326732673267, Blast_Score=62, Evalue=6e-11,
Organism=Escherichia coli, GI87082100, Length=188, Percent_Identity=29.7872340425532, Blast_Score=62, Evalue=7e-11,
Organism=Caenorhabditis elegans, GI17507613, Length=289, Percent_Identity=26.9896193771626, Blast_Score=92, Evalue=3e-19,
Organism=Caenorhabditis elegans, GI32563809, Length=289, Percent_Identity=26.9896193771626, Blast_Score=92, Evalue=4e-19,
Organism=Caenorhabditis elegans, GI17557780, Length=206, Percent_Identity=31.5533980582524, Blast_Score=76, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI115534660, Length=307, Percent_Identity=23.7785016286645, Blast_Score=75, Evalue=7e-14,
Organism=Caenorhabditis elegans, GI17508895, Length=179, Percent_Identity=29.0502793296089, Blast_Score=71, Evalue=8e-13,
Organism=Caenorhabditis elegans, GI17570069, Length=207, Percent_Identity=29.4685990338164, Blast_Score=70, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI17568967, Length=200, Percent_Identity=33.5, Blast_Score=69, Evalue=5e-12,
Organism=Saccharomyces cerevisiae, GI6322227, Length=207, Percent_Identity=27.0531400966184, Blast_Score=70, Evalue=7e-13,
Organism=Saccharomyces cerevisiae, GI6322067, Length=200, Percent_Identity=27.5, Blast_Score=65, Evalue=1e-11,
Organism=Saccharomyces cerevisiae, GI6323882, Length=199, Percent_Identity=28.643216080402, Blast_Score=65, Evalue=2e-11,
Organism=Drosophila melanogaster, GI21358495, Length=200, Percent_Identity=33, Blast_Score=88, Evalue=9e-18,
Organism=Drosophila melanogaster, GI21356301, Length=184, Percent_Identity=31.5217391304348, Blast_Score=81, Evalue=9e-16,
Organism=Drosophila melanogaster, GI24651139, Length=196, Percent_Identity=28.5714285714286, Blast_Score=79, Evalue=3e-15,
Organism=Drosophila melanogaster, GI28571526, Length=193, Percent_Identity=29.0155440414508, Blast_Score=75, Evalue=9e-14,
Organism=Drosophila melanogaster, GI281364892, Length=177, Percent_Identity=29.9435028248588, Blast_Score=73, Evalue=3e-13,
Organism=Drosophila melanogaster, GI24641232, Length=211, Percent_Identity=30.8056872037915, Blast_Score=70, Evalue=2e-12,
Organism=Drosophila melanogaster, GI116007236, Length=201, Percent_Identity=30.8457711442786, Blast_Score=69, Evalue=3e-12,
Organism=Drosophila melanogaster, GI23397609, Length=215, Percent_Identity=29.3023255813954, Blast_Score=68, Evalue=1e-11,
Organism=Drosophila melanogaster, GI21357041, Length=193, Percent_Identity=26.9430051813472, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI116007238, Length=193, Percent_Identity=31.0880829015544, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI20128793, Length=223, Percent_Identity=26.457399103139, Blast_Score=65, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040
- InterPro:   IPR020904 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 35995; Mature: 35863

Theoretical pI: Translated: 11.00; Mature: 11.00

Prosite motif: PS00061 ADH_SHORT

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEPRSVVITGASRGLGFASALRMYREGWRVVAAMRTPDQGMPLLRRAIRDGTGQDPDDD
CCCCCEEEEECCCCCCHHHHHHHHHHHCCEEEEEECCCCCCCHHHHHHHHCCCCCCCCCC
RLIGVQLDLTDSASVAAAAKAIEEAVGAPSAIVHNAGISAAGMVEETDTALWQRMFATSV
CEEEEEEECCCCHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHH
LGPVALTQALLPSMRAAGRGRIVLVSSAAGVRGQPGTAPYSAAKGALERWGESLAGEIAP
HHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCC
FGLGVTVLVAGTYDTEIITDAGTTDDRNFSGPYARLHTTMNTRGRLAVSFARRPERFTDG
CCCCEEEEEECCCCCEEEECCCCCCCCCCCCCHHHEEECCCCCCCEEEHHHHCCHHHHHH
LYKALDDRAPFRRRGVGPDASVLLAANRILPASGMHHLSRVVLGIPRQGSMRDGAWPLTH
HHHHHHCCCCHHHCCCCCCCCEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCC
GQRAMVLVARVLPQPVLQRLAALAGRFSSPKSAARQGDQEG
CCHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHCCCCCC
>Mature Secondary Structure 
AEPRSVVITGASRGLGFASALRMYREGWRVVAAMRTPDQGMPLLRRAIRDGTGQDPDDD
CCCCEEEEECCCCCCHHHHHHHHHHHCCEEEEEECCCCCCCHHHHHHHHCCCCCCCCCC
RLIGVQLDLTDSASVAAAAKAIEEAVGAPSAIVHNAGISAAGMVEETDTALWQRMFATSV
CEEEEEEECCCCHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHH
LGPVALTQALLPSMRAAGRGRIVLVSSAAGVRGQPGTAPYSAAKGALERWGESLAGEIAP
HHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCC
FGLGVTVLVAGTYDTEIITDAGTTDDRNFSGPYARLHTTMNTRGRLAVSFARRPERFTDG
CCCCEEEEEECCCCCEEEECCCCCCCCCCCCCHHHEEECCCCCCCEEEHHHHCCHHHHHH
LYKALDDRAPFRRRGVGPDASVLLAANRILPASGMHHLSRVVLGIPRQGSMRDGAWPLTH
HHHHHHCCCCHHHCCCCCCCCEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCC
GQRAMVLVARVLPQPVLQRLAALAGRFSSPKSAARQGDQEG
CCHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9353931; 9384377; 8396117 [H]