| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is CYP107B1 [H]
Identifier: 41408747
GI number: 41408747
Start: 2982485
End: 2983699
Strand: Reverse
Name: CYP107B1 [H]
Synonym: MAP2649c
Alternate gene names: 41408747
Gene position: 2983699-2982485 (Counterclockwise)
Preceding gene: 41408748
Following gene: 41408746
Centisome position: 61.78
GC content: 68.56
Gene sequence:
>1215_bases ATGGAGCAACTTTTCGACGACCTGGAAGACTTCGGCGCCTTCGACGACGCGGTCTCCGGGGACGTGCGCGACCCGTACAC CGAATTGGCCCGGCTGCGCCGCGAGGAGCCGATTCAGCGATTGGACACCTCGGGCATGCCGCACGAGGAATCCAAGCCGG TGTTCATCGTCTACCGCCACGAGGACGCCCAGCAGATGCTGCGCGACAACGAGACGTTCTCGTCGGCCGCCGTCATCGCG GCGTTCGGGCCGGTGCTGGGCGAGCGCGTGATGCTGGGTATAGACGAGCCGGTGCACGGACGGCTGCGGTCGCTGGTGTC AAAGGCGTTCTCGCAGAAGGCATTGGCGCGCTGGGAGGACGAGCTGGTCGGGCGGGTGGGCAACAGCCTGATCGACAGGT TCGCCGGCAACGGCAAGGCCGATCTGGTCAAGGAGTTCACCTTCGACTATCCCAGCCGGATCATCGCGGGCCTGCTGGGC CTGCCCGAGCAGGACTACCCGCAGTTTCAGCGGTGGTCCATCTCGTTGCTGAGCTGGATCCTGAATCCGGAACGCGGGCT TGCCGCCTCGGCCGCGCTGTGCGACTACTTCGCGCCGATCCTGGCGGCGCGGCGCGCAGAGCCCAAGGACGATCTGATCA GCGGGCTGGCCCAGGCCGAGATCGACGGCGAGAAGCTGGAAGACGAGGAGATCTACTCCTTCCTGCGGCTGCTGCTGCCG GCCGGGGTGGAGACGACGTACCGGGCGCTGGGCAGCCTGCTGCTTGCGCTGCTGTCCGATCCGGAGCAGTTGGATGCCAT CCGCGGGGACCGCTCGCTGCTGCCGCAGGCCATCGAGGAGGGCGTGCGCTGGGAGCCCCCGCTGCTGACCATCACCCGGG TGGCCACCCGCGACACCGAACTCGGCGGGGTGCCGATCCCGGCCGGCTCCACGGTGATGCCGATGCTGGGCGCCGCCAAC CGGCAGGAGGACCGCTACCCCGACCCGGACAGGTTCGACATCTTCCGCGCGCCCAAGAGTCATCTGGGCTGGGGGCACGG CGTGCACGTCTGCCTGGGCATGCATCTGGCCCGCCTGGAGATGCGCACCGCCGTCAACCTGCTGCTGGACCGGCTGCCGA ACCTTCGGCTGGACCCCGACGCCGACGATCCCCACATCCGGGGCCAGGTGTTCCGGTCGCCGACGTCGGTCCCGGTGCTG TTCGACCCGCAATAA
Upstream 100 bases:
>100_bases GGGTGCTTCCGCAGCCGGTGTTGCAGCGCCTGGCCGCGCTGGCCGGGCGGTTCTCGTCACCGAAAAGCGCGGCACGTCAA GGGGATCAAGAGGGGTAATC
Downstream 100 bases:
>100_bases CCAGCCCGGCGGCGGCCGCAGCTTGCCAATCGGCTAGTTTCCGGTAAGGCTCTCCGTAGCCCCTCCGCGACCCAGAAGAG AGTGACAGATATGACTGAGG
Product: hypothetical protein
Products: NA
Alternate protein names: Cytochrome P450CVIIB1 [H]
Number of amino acids: Translated: 404; Mature: 404
Protein sequence:
>404_residues MEQLFDDLEDFGAFDDAVSGDVRDPYTELARLRREEPIQRLDTSGMPHEESKPVFIVYRHEDAQQMLRDNETFSSAAVIA AFGPVLGERVMLGIDEPVHGRLRSLVSKAFSQKALARWEDELVGRVGNSLIDRFAGNGKADLVKEFTFDYPSRIIAGLLG LPEQDYPQFQRWSISLLSWILNPERGLAASAALCDYFAPILAARRAEPKDDLISGLAQAEIDGEKLEDEEIYSFLRLLLP AGVETTYRALGSLLLALLSDPEQLDAIRGDRSLLPQAIEEGVRWEPPLLTITRVATRDTELGGVPIPAGSTVMPMLGAAN RQEDRYPDPDRFDIFRAPKSHLGWGHGVHVCLGMHLARLEMRTAVNLLLDRLPNLRLDPDADDPHIRGQVFRSPTSVPVL FDPQ
Sequences:
>Translated_404_residues MEQLFDDLEDFGAFDDAVSGDVRDPYTELARLRREEPIQRLDTSGMPHEESKPVFIVYRHEDAQQMLRDNETFSSAAVIA AFGPVLGERVMLGIDEPVHGRLRSLVSKAFSQKALARWEDELVGRVGNSLIDRFAGNGKADLVKEFTFDYPSRIIAGLLG LPEQDYPQFQRWSISLLSWILNPERGLAASAALCDYFAPILAARRAEPKDDLISGLAQAEIDGEKLEDEEIYSFLRLLLP AGVETTYRALGSLLLALLSDPEQLDAIRGDRSLLPQAIEEGVRWEPPLLTITRVATRDTELGGVPIPAGSTVMPMLGAAN RQEDRYPDPDRFDIFRAPKSHLGWGHGVHVCLGMHLARLEMRTAVNLLLDRLPNLRLDPDADDPHIRGQVFRSPTSVPVL FDPQ >Mature_404_residues MEQLFDDLEDFGAFDDAVSGDVRDPYTELARLRREEPIQRLDTSGMPHEESKPVFIVYRHEDAQQMLRDNETFSSAAVIA AFGPVLGERVMLGIDEPVHGRLRSLVSKAFSQKALARWEDELVGRVGNSLIDRFAGNGKADLVKEFTFDYPSRIIAGLLG LPEQDYPQFQRWSISLLSWILNPERGLAASAALCDYFAPILAARRAEPKDDLISGLAQAEIDGEKLEDEEIYSFLRLLLP AGVETTYRALGSLLLALLSDPEQLDAIRGDRSLLPQAIEEGVRWEPPLLTITRVATRDTELGGVPIPAGSTVMPMLGAAN RQEDRYPDPDRFDIFRAPKSHLGWGHGVHVCLGMHLARLEMRTAVNLLLDRLPNLRLDPDADDPHIRGQVFRSPTSVPVL FDPQ
Specific function: Not known, probably involved in the catabolism of octane and guaiacol. It displays a weak activity in the O-dealkylation of 7-ethoxycoumarin [H]
COG id: COG2124
COG function: function code Q; Cytochrome P450
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cytochrome P450 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001128 - InterPro: IPR002397 - InterPro: IPR017972 [H]
Pfam domain/function: PF00067 p450 [H]
EC number: NA
Molecular weight: Translated: 45055; Mature: 45055
Theoretical pI: Translated: 4.56; Mature: 4.56
Prosite motif: PS00086 CYTOCHROME_P450
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEQLFDDLEDFGAFDDAVSGDVRDPYTELARLRREEPIQRLDTSGMPHEESKPVFIVYRH CHHHHHHHHHHCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEC EDAQQMLRDNETFSSAAVIAAFGPVLGERVMLGIDEPVHGRLRSLVSKAFSQKALARWED CHHHHHHHCCCCHHHHHHHHHHHHHHHCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHH ELVGRVGNSLIDRFAGNGKADLVKEFTFDYPSRIIAGLLGLPEQDYPQFQRWSISLLSWI HHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH LNPERGLAASAALCDYFAPILAARRAEPKDDLISGLAQAEIDGEKLEDEEIYSFLRLLLP HCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHC AGVETTYRALGSLLLALLSDPEQLDAIRGDRSLLPQAIEEGVRWEPPLLTITRVATRDTE CCCHHHHHHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCEEEEHHHHCCCC LGGVPIPAGSTVMPMLGAANRQEDRYPDPDRFDIFRAPKSHLGWGHGVHVCLGMHLARLE CCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCHHHCCCCHHHCCCCCHHHHHHHHHHHHHH MRTAVNLLLDRLPNLRLDPDADDPHIRGQVFRSPTSVPVLFDPQ HHHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCCCCCCEEECCC >Mature Secondary Structure MEQLFDDLEDFGAFDDAVSGDVRDPYTELARLRREEPIQRLDTSGMPHEESKPVFIVYRH CHHHHHHHHHHCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEC EDAQQMLRDNETFSSAAVIAAFGPVLGERVMLGIDEPVHGRLRSLVSKAFSQKALARWED CHHHHHHHCCCCHHHHHHHHHHHHHHHCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHH ELVGRVGNSLIDRFAGNGKADLVKEFTFDYPSRIIAGLLGLPEQDYPQFQRWSISLLSWI HHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH LNPERGLAASAALCDYFAPILAARRAEPKDDLISGLAQAEIDGEKLEDEEIYSFLRLLLP HCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHC AGVETTYRALGSLLLALLSDPEQLDAIRGDRSLLPQAIEEGVRWEPPLLTITRVATRDTE CCCHHHHHHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCEEEEHHHHCCCC LGGVPIPAGSTVMPMLGAANRQEDRYPDPDRFDIFRAPKSHLGWGHGVHVCLGMHLARLE CCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCHHHCCCCHHHCCCCCHHHHHHHHHHHHHH MRTAVNLLLDRLPNLRLDPDADDPHIRGQVFRSPTSVPVLFDPQ HHHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCCCCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1732208 [H]