| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41408724
Identifier: 41408724
GI number: 41408724
Start: 2962650
End: 2963741
Strand: Direct
Name: 41408724
Synonym: MAP2626
Alternate gene names: NA
Gene position: 2962650-2963741 (Clockwise)
Preceding gene: 41408723
Following gene: 41408729
Centisome position: 61.34
GC content: 75.46
Gene sequence:
>1092_bases GTGGCAACCACTTGGATTCTGTCCAAAGGTTTGGCCGCTGTCGTCACGGCATCGGTTGCCGCGCTCGGGCTGTGCCCGGG CGCGGCAGCCGACCCGGCGGCGGCGCCCCAGCCGGCACCACCACCCAACGCCGCCCCGCAATTGCCGGGCCTGCCCGCCC TGTCGCAGCTCAGCCCGCTGATCCAGCAAGCGGCCACCGACCCGCAGCAAGCCACCCAGCTGCTGATGGCCGCCGCGCAA GCCTTCAGTCACAACCCGACCGCGCCCACCGAGTCGAAGAACGTGGCCGCGGCGGTGAACCAGTTCGTCGCCGAGCCCGG CTCGCCGGTGCCCAACGGCGTGACCCCGCCGGACGGCGCGCCGGTCCAGCACGTGCCGGCCACCGGCATCGAACCGGGTC TGCAGGCGCACCTGCCGACCGGCATCGACCCGGCGCACGCGGCCGGCCCGGCACCCGCCGCCGCTGCGCCGTCGGCTCCG GCACCCGTCGCGGCACCCGCCGCCACCCCGCCGTCCGCTCCGGCACCCGCCGCGGCTCCCGCGCCCGGGCCGGTTCAGCC GGCCACCGTCCCGGCCGCCGCACCGGTTCCGCCGCCACCGGCGCCGGCCGCCGCGGCCCCGGCAACCCCGGGCGCACCCG ACGCCGCGCCGGCCCCCGCGGCGGCGCCCGGGTTCGGCGCCGACGCGCCGCCCACGCAGGACTTCATGTATCCCTCGATC GGCACCAACTGCCTGGCCGACGGCAGCAGCGCCATCGCCACCGCGCTCTCGGTGGCGGGGCCGGCCAAGATCCCCGCCCC CGGCCCGGGCCCCGGCCAGACCGCCTACGTGTTCACGGCGGTCGGCACGCCCGGTCCCGCCGAGGAGCAGAAGCTGCCGT TGAACGTTACCTGGGTGAACCTGACCACCGGCAAATCCGGAACCGTCGCGCTGAAACCGCGGCCGGACATCAACCCGGAC GGGCCCACGACGTTGAGCGCGATCGCCGACACCGGCTCGGGCAGCATCATGTCGACGATCTTCGGGCAGGTCACCACCAA GGAACGGCAGTGCCAGTTCATGCCCACCATCGGCTCCACGGTGGTGCCGTAA
Upstream 100 bases:
>100_bases CGGCGGCCAGCCCGGCCGGTCCGGTGGCGCCGCTGCTCGCTGCCCTGCCTTGAGCAGCACCGTCAATCGGCTAACCCACT ACTGAGAACCGGAGGACACC
Downstream 100 bases:
>100_bases CGGCGTCACCGCTGCACCGCCCGCGAACGCGCGCGTCCCGGCCCGGGGCGCGCGCCTTCGCGCTCAGTAGGCCATGAACA AGATGGCGTCGCGGTCGTAT
Product: hypothetical protein
Products: NA
Alternate protein names: Conserved Alanine And Proline Rich Protein
Number of amino acids: Translated: 363; Mature: 362
Protein sequence:
>363_residues MATTWILSKGLAAVVTASVAALGLCPGAAADPAAAPQPAPPPNAAPQLPGLPALSQLSPLIQQAATDPQQATQLLMAAAQ AFSHNPTAPTESKNVAAAVNQFVAEPGSPVPNGVTPPDGAPVQHVPATGIEPGLQAHLPTGIDPAHAAGPAPAAAAPSAP APVAAPAATPPSAPAPAAAPAPGPVQPATVPAAAPVPPPPAPAAAAPATPGAPDAAPAPAAAPGFGADAPPTQDFMYPSI GTNCLADGSSAIATALSVAGPAKIPAPGPGPGQTAYVFTAVGTPGPAEEQKLPLNVTWVNLTTGKSGTVALKPRPDINPD GPTTLSAIADTGSGSIMSTIFGQVTTKERQCQFMPTIGSTVVP
Sequences:
>Translated_363_residues MATTWILSKGLAAVVTASVAALGLCPGAAADPAAAPQPAPPPNAAPQLPGLPALSQLSPLIQQAATDPQQATQLLMAAAQ AFSHNPTAPTESKNVAAAVNQFVAEPGSPVPNGVTPPDGAPVQHVPATGIEPGLQAHLPTGIDPAHAAGPAPAAAAPSAP APVAAPAATPPSAPAPAAAPAPGPVQPATVPAAAPVPPPPAPAAAAPATPGAPDAAPAPAAAPGFGADAPPTQDFMYPSI GTNCLADGSSAIATALSVAGPAKIPAPGPGPGQTAYVFTAVGTPGPAEEQKLPLNVTWVNLTTGKSGTVALKPRPDINPD GPTTLSAIADTGSGSIMSTIFGQVTTKERQCQFMPTIGSTVVP >Mature_362_residues ATTWILSKGLAAVVTASVAALGLCPGAAADPAAAPQPAPPPNAAPQLPGLPALSQLSPLIQQAATDPQQATQLLMAAAQA FSHNPTAPTESKNVAAAVNQFVAEPGSPVPNGVTPPDGAPVQHVPATGIEPGLQAHLPTGIDPAHAAGPAPAAAAPSAPA PVAAPAATPPSAPAPAAAPAPGPVQPATVPAAAPVPPPPAPAAAAPATPGAPDAAPAPAAAPGFGADAPPTQDFMYPSIG TNCLADGSSAIATALSVAGPAKIPAPGPGPGQTAYVFTAVGTPGPAEEQKLPLNVTWVNLTTGKSGTVALKPRPDINPDG PTTLSAIADTGSGSIMSTIFGQVTTKERQCQFMPTIGSTVVP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34878; Mature: 34746
Theoretical pI: Translated: 4.50; Mature: 4.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATTWILSKGLAAVVTASVAALGLCPGAAADPAAAPQPAPPPNAAPQLPGLPALSQLSPL CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH IQQAATDPQQATQLLMAAAQAFSHNPTAPTESKNVAAAVNQFVAEPGSPVPNGVTPPDGA HHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCC PVQHVPATGIEPGLQAHLPTGIDPAHAAGPAPAAAAPSAPAPVAAPAATPPSAPAPAAAP CCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC APGPVQPATVPAAAPVPPPPAPAAAAPATPGAPDAAPAPAAAPGFGADAPPTQDFMYPSI CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GTNCLADGSSAIATALSVAGPAKIPAPGPGPGQTAYVFTAVGTPGPAEEQKLPLNVTWVN CCHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCEEEEEEE LTTGKSGTVALKPRPDINPDGPTTLSAIADTGSGSIMSTIFGQVTTKERQCQFMPTIGST EECCCCCEEEECCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHCCCCCCEEECCCCCCC VVP CCC >Mature Secondary Structure ATTWILSKGLAAVVTASVAALGLCPGAAADPAAAPQPAPPPNAAPQLPGLPALSQLSPL CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH IQQAATDPQQATQLLMAAAQAFSHNPTAPTESKNVAAAVNQFVAEPGSPVPNGVTPPDGA HHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCC PVQHVPATGIEPGLQAHLPTGIDPAHAAGPAPAAAAPSAPAPVAAPAATPPSAPAPAAAP CCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC APGPVQPATVPAAAPVPPPPAPAAAAPATPGAPDAAPAPAAAPGFGADAPPTQDFMYPSI CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GTNCLADGSSAIATALSVAGPAKIPAPGPGPGQTAYVFTAVGTPGPAEEQKLPLNVTWVN CCHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCEEEEEEE LTTGKSGTVALKPRPDINPDGPTTLSAIADTGSGSIMSTIFGQVTTKERQCQFMPTIGST EECCCCCEEEECCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHCCCCCCEEECCCCCCC VVP CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA