| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41408729
Identifier: 41408729
GI number: 41408729
Start: 2965482
End: 2966042
Strand: Direct
Name: 41408729
Synonym: MAP2631
Alternate gene names: NA
Gene position: 2965482-2966042 (Clockwise)
Preceding gene: 41408724
Following gene: 41408731
Centisome position: 61.4
GC content: 68.45
Gene sequence:
>561_bases ATGGTCGTCACCGGGCCGGGCTGGTGGAATCGGGGCATGACCGAATACGCGGCGTTTTTGCGGGGCGTCAACGTCGGCGG CGTCAATCTCAAGATGGCCGACGTGAAAAAGGCCCTGACCGACGCCGGCTTCACCGCGGTGCGGACGGTCCTGGCCAGCG GCAACGTCCTGCTGCAGTCGAAGGCCGGCGCGGCGGCGGTGCGCGCGAAGGCCGAAGCCGCGTTGCGCGAACGGTTCGGC TACGACGCCTGGGTGTTGGTCTATGACCTCGACACCGTGCGCCGGGTGGTCGACGGCTATCCGTTCGAGCGCGAGGTCGA CGGCTACCAGTCCTATGTCACGTTCGTGGCCGACGCCGCCGTGCTGGACGAACTCGCCGCCCTGCCGGCCGGGCCCGACG AGAGGATCCGCCGCGGCCCCGATCCGCTGGGCGTGCTCTACTGGCAGGTGCCCAAGGGCAGCACCCTGGACAGCACCATC GGCAAGACGATGGGCAAGCCGCGGTACAAGTCGTCGACCACCACCCGCAATCTGCGCACCCTGGTCAAGGTGTTGAGCTA G
Upstream 100 bases:
>100_bases ACCCCGAGAGAATTTCCACTGATGACGGCCAACAGTTTGTCGTCGAAGACTTGGCGTCCCATGCCGAAAGCCTACGTCGC ACGCCGACCGGCGGCCCCCG
Downstream 100 bases:
>100_bases CCGTCGCAAAACCCCACGGCGGCAAGGTTTTTCAGCCCCCGGCCGGGCTTCTCACTCGTCGGGCACCGATTCGATGTAGC GCACGGCGTCCGCCTTGTCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 186; Mature: 186
Protein sequence:
>186_residues MVVTGPGWWNRGMTEYAAFLRGVNVGGVNLKMADVKKALTDAGFTAVRTVLASGNVLLQSKAGAAAVRAKAEAALRERFG YDAWVLVYDLDTVRRVVDGYPFEREVDGYQSYVTFVADAAVLDELAALPAGPDERIRRGPDPLGVLYWQVPKGSTLDSTI GKTMGKPRYKSSTTTRNLRTLVKVLS
Sequences:
>Translated_186_residues MVVTGPGWWNRGMTEYAAFLRGVNVGGVNLKMADVKKALTDAGFTAVRTVLASGNVLLQSKAGAAAVRAKAEAALRERFG YDAWVLVYDLDTVRRVVDGYPFEREVDGYQSYVTFVADAAVLDELAALPAGPDERIRRGPDPLGVLYWQVPKGSTLDSTI GKTMGKPRYKSSTTTRNLRTLVKVLS >Mature_186_residues MVVTGPGWWNRGMTEYAAFLRGVNVGGVNLKMADVKKALTDAGFTAVRTVLASGNVLLQSKAGAAAVRAKAEAALRERFG YDAWVLVYDLDTVRRVVDGYPFEREVDGYQSYVTFVADAAVLDELAALPAGPDERIRRGPDPLGVLYWQVPKGSTLDSTI GKTMGKPRYKSSTTTRNLRTLVKVLS
Specific function: Unknown
COG id: COG3797
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20216; Mature: 20216
Theoretical pI: Translated: 10.01; Mature: 10.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVVTGPGWWNRGMTEYAAFLRGVNVGGVNLKMADVKKALTDAGFTAVRTVLASGNVLLQS CEECCCCCCCCCHHHHHHHHHCCCCCCCEEEHHHHHHHHHHCCHHHHHHHHHCCCEEEEC KAGAAAVRAKAEAALRERFGYDAWVLVYDLDTVRRVVDGYPFEREVDGYQSYVTFVADAA CCCHHHHHHHHHHHHHHHCCCCEEEEEEEHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH VLDELAALPAGPDERIRRGPDPLGVLYWQVPKGSTLDSTIGKTMGKPRYKSSTTTRNLRT HHHHHHHCCCCCHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHCCCCCCCCCCHHHHHHH LVKVLS HHHHHC >Mature Secondary Structure MVVTGPGWWNRGMTEYAAFLRGVNVGGVNLKMADVKKALTDAGFTAVRTVLASGNVLLQS CEECCCCCCCCCHHHHHHHHHCCCCCCCEEEHHHHHHHHHHCCHHHHHHHHHCCCEEEEC KAGAAAVRAKAEAALRERFGYDAWVLVYDLDTVRRVVDGYPFEREVDGYQSYVTFVADAA CCCHHHHHHHHHHHHHHHCCCCEEEEEEEHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH VLDELAALPAGPDERIRRGPDPLGVLYWQVPKGSTLDSTIGKTMGKPRYKSSTTTRNLRT HHHHHHHCCCCCHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHCCCCCCCCCCHHHHHHH LVKVLS HHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA