| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is cysC [H]
Identifier: 41408697
GI number: 41408697
Start: 2924956
End: 2925648
Strand: Reverse
Name: cysC [H]
Synonym: MAP2599c
Alternate gene names: 41408697
Gene position: 2925648-2924956 (Counterclockwise)
Preceding gene: 41408701
Following gene: 41408696
Centisome position: 60.58
GC content: 66.67
Gene sequence:
>693_bases ATGTCGAACAACATCACCTGGCACGAACACAAGATCAGCCGCGGCGAACGCGAGCAACTCAACGGCCACAAGGGCTGCGT CATCTGGTTCACCGGGCTCAGCGGCAGCGGCAAGAGCACGGTCGCCAACGTGGTCGAGCAGAAGCTCTACGAGCGGGGCA TCCGCAGCTACCTGCTGGACGGCGACAACGTCCGCTACGGGCTCAACGCCGGCCCGGATCTGCTCGAGGAGCGGCACGGA CCCGAGTTCGCCCAGCGGTTCGGACTGGGATTCTCCGCCCAGGACCGCGAGGAGAACATCCGCCGGATCGGCGCGGTGGC GAAGTTGTTCTGCGAGGCCGGCATCATCGCGCTGACGGCCTTCATCAGCCCCTACGTCCGCGACCGGGACGCGATTCGGG CCACCCTCGACGACGGCGATTTCCAGGAGATCTTCATCGACACCCCGATCGAGATCTGCGAAAAGCGGGATCCCAAAGGG CTTTACAAGAAGGCGCGGGCCGGTGAGATCAAGGGATTCACCGGGATCGACGACCCCTACGAGGCCCCGCCGCGGCCCGA ATTGCGGCTCGACGGCGCCGCCAAGGACGCCGAGACGCTGGCCGAGGAGGTGATCGCCCACCTGGAGCGGGTCGGCGTGA TCGCCACCGACGGTCTTGCGCACACCCGGGGACGCGACGAGGTGACCGCATGA
Upstream 100 bases:
>100_bases CGAGCCAGGCTCCACCCGGAGCGGGCGCGGCATCCGGTGACGCACAGGTGGTAAGCGGCCGTTGGGGTTTCGCTGCCGTC CGGGAATACAGGAGTCGGAA
Downstream 100 bases:
>100_bases ACTACACCGGCCACAACGGCAAGCCGCTGGTGGAGCGGGTGTCCACCGAGAACGCGGCGGCCCGCATCGAGGGCCTGCCG CGGGTGCCGATCTCGAAAGC
Product: hypothetical protein
Products: NA
Alternate protein names: APS kinase; ATP adenosine-5'-phosphosulfate 3'-phosphotransferase; Adenosine-5'-phosphosulfate kinase [H]
Number of amino acids: Translated: 230; Mature: 229
Protein sequence:
>230_residues MSNNITWHEHKISRGEREQLNGHKGCVIWFTGLSGSGKSTVANVVEQKLYERGIRSYLLDGDNVRYGLNAGPDLLEERHG PEFAQRFGLGFSAQDREENIRRIGAVAKLFCEAGIIALTAFISPYVRDRDAIRATLDDGDFQEIFIDTPIEICEKRDPKG LYKKARAGEIKGFTGIDDPYEAPPRPELRLDGAAKDAETLAEEVIAHLERVGVIATDGLAHTRGRDEVTA
Sequences:
>Translated_230_residues MSNNITWHEHKISRGEREQLNGHKGCVIWFTGLSGSGKSTVANVVEQKLYERGIRSYLLDGDNVRYGLNAGPDLLEERHG PEFAQRFGLGFSAQDREENIRRIGAVAKLFCEAGIIALTAFISPYVRDRDAIRATLDDGDFQEIFIDTPIEICEKRDPKG LYKKARAGEIKGFTGIDDPYEAPPRPELRLDGAAKDAETLAEEVIAHLERVGVIATDGLAHTRGRDEVTA >Mature_229_residues SNNITWHEHKISRGEREQLNGHKGCVIWFTGLSGSGKSTVANVVEQKLYERGIRSYLLDGDNVRYGLNAGPDLLEERHGP EFAQRFGLGFSAQDREENIRRIGAVAKLFCEAGIIALTAFISPYVRDRDAIRATLDDGDFQEIFIDTPIEICEKRDPKGL YKKARAGEIKGFTGIDDPYEAPPRPELRLDGAAKDAETLAEEVIAHLERVGVIATDGLAHTRGRDEVTA
Specific function: Catalyzes the synthesis of activated sulfate [H]
COG id: COG0529
COG function: function code P; Adenylylsulfate kinase and related kinases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the APS kinase family [H]
Homologues:
Organism=Homo sapiens, GI46094058, Length=223, Percent_Identity=45.2914798206278, Blast_Score=200, Evalue=1e-51, Organism=Homo sapiens, GI62912492, Length=219, Percent_Identity=44.7488584474886, Blast_Score=188, Evalue=3e-48, Organism=Homo sapiens, GI34447231, Length=219, Percent_Identity=44.7488584474886, Blast_Score=188, Evalue=3e-48, Organism=Escherichia coli, GI1789107, Length=189, Percent_Identity=53.4391534391534, Blast_Score=214, Evalue=3e-57, Organism=Caenorhabditis elegans, GI17542422, Length=219, Percent_Identity=46.1187214611872, Blast_Score=189, Evalue=9e-49, Organism=Saccharomyces cerevisiae, GI6322852, Length=210, Percent_Identity=48.5714285714286, Blast_Score=194, Evalue=1e-50, Organism=Drosophila melanogaster, GI24667032, Length=220, Percent_Identity=43.1818181818182, Blast_Score=185, Evalue=2e-47, Organism=Drosophila melanogaster, GI24667028, Length=220, Percent_Identity=43.1818181818182, Blast_Score=185, Evalue=2e-47, Organism=Drosophila melanogaster, GI24667036, Length=220, Percent_Identity=43.1818181818182, Blast_Score=185, Evalue=2e-47, Organism=Drosophila melanogaster, GI24667040, Length=220, Percent_Identity=43.1818181818182, Blast_Score=184, Evalue=3e-47, Organism=Drosophila melanogaster, GI116007838, Length=220, Percent_Identity=43.1818181818182, Blast_Score=184, Evalue=3e-47, Organism=Drosophila melanogaster, GI24667044, Length=220, Percent_Identity=43.1818181818182, Blast_Score=184, Evalue=3e-47,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002891 [H]
Pfam domain/function: PF01583 APS_kinase [H]
EC number: =2.7.1.25 [H]
Molecular weight: Translated: 25508; Mature: 25377
Theoretical pI: Translated: 5.23; Mature: 5.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNNITWHEHKISRGEREQLNGHKGCVIWFTGLSGSGKSTVANVVEQKLYERGIRSYLLD CCCCCCCHHHHHCCCCHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCC GDNVRYGLNAGPDLLEERHGPEFAQRFGLGFSAQDREENIRRIGAVAKLFCEAGIIALTA CCCEEECCCCCHHHHHHCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH FISPYVRDRDAIRATLDDGDFQEIFIDTPIEICEKRDPKGLYKKARAGEIKGFTGIDDPY HHHHHHCCCHHHEEECCCCCCEEEEECCCHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCC EAPPRPELRLDGAAKDAETLAEEVIAHLERVGVIATDGLAHTRGRDEVTA CCCCCCCEEECCCCCHHHHHHHHHHHHHHHHCCEEECCCHHCCCCCCCCC >Mature Secondary Structure SNNITWHEHKISRGEREQLNGHKGCVIWFTGLSGSGKSTVANVVEQKLYERGIRSYLLD CCCCCCHHHHHCCCCHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCC GDNVRYGLNAGPDLLEERHGPEFAQRFGLGFSAQDREENIRRIGAVAKLFCEAGIIALTA CCCEEECCCCCHHHHHHCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH FISPYVRDRDAIRATLDDGDFQEIFIDTPIEICEKRDPKGLYKKARAGEIKGFTGIDDPY HHHHHHCCCHHHEEECCCCCCEEEEECCCHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCC EAPPRPELRLDGAAKDAETLAEEVIAHLERVGVIATDGLAHTRGRDEVTA CCCCCCCEEECCCCCHHHHHHHHHHHHHHHHCCEEECCCHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12835416 [H]