| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41408590
Identifier: 41408590
GI number: 41408590
Start: 2796963
End: 2797943
Strand: Reverse
Name: 41408590
Synonym: MAP2492c
Alternate gene names: NA
Gene position: 2797943-2796963 (Counterclockwise)
Preceding gene: 41408591
Following gene: 41408585
Centisome position: 57.93
GC content: 70.64
Gene sequence:
>981_bases ATGTCGCGTCACGACGACGCCGGCGCCGACCTGCCGCCGGAGGCGATGACGGTCAATCAGGTGGTCGACGACGTGGCGGC GGTGCTCGACGACGCCCGCGTGGATTCGGCGGTCGTCTACGGCGCGTCGTACGGCACCTACATCGCGTCCGGCGTGGGCG TGCGTCATCCCGCCCGGGTGCACGGGATGGTGCTCGATTCGCCGCTGCTGTCCCGGCACGACATTGTGATCGTGCGCCGG GCGATTCGCCGGCTGCTGCTGCGCGGCGACAGCCCCGAAACCGCTTCGCTGGCACCGAAAATGCGCAAACTTGTCGACGC CGGGGTGATGACCGCGACGGCGACACAGGTGGTGGCGACGATCTACGGCTACGGCGGGGCGCGGCTGCTCGAGCGGCAAC TCGACCTGCTGCTGGATGGCCGAAAACTGTTGTGGTGGACGCTTTCCCGCTTCACCACCCTGGGCAACCTGCCGTTTCGG TATGAAGAGGACCTGGTGAGCCGCATCGCGCTTCGCGAGCTGGACTATGCCGCCGAACCGGACGGTCTGCCGCTTGACCC CGCCGTGGCGGAACGCGAAGTACGCACGCAGACAGCGGCTTTCGAGGACGAGCCCTATGACCTTCCGGCCGAGATGCCGA ACTTCGACTGGCCCACCGCGGTGGTGTCCGGCGGTCGCGACCTCATCACCCCACCGGCGGTCGCCGAGCGCGTCGCGTCG CTACTGCCCCATGCGGTGCTGCTGAGCCTGCCGGACATGGCGCACAGCGCGCTCGATTTCCACGAGGCCGTCGCGCTGGC CAGCGCCGACGCGGTGCTGCGCGGCGACCTGGCCGGACTCGCCGCCCGGGCCTGCACCCTGAACGCGCTTCCGCCACGCC CCGAGGTGCGGCTGCTGTGGGCCCTGATCGCGGCGGCCGCCATTATCGAGGGCGCGCTGCCGATCCCGGCGCCGCTGCGG CGCCGGCTCAGCTGCGGGTGA
Upstream 100 bases:
>100_bases CGGGCCGGGCGTGGCGTCGGTGCAGATGTACAAGGGGCTGCGCCGGCGCGCCGCTGCGGCCGGTCTCGACGTCATCATGA TCGAACACCGCGGGGTGGGG
Downstream 100 bases:
>100_bases ACCCGATCGCGGTGTAGTTCAGATCGCCCAGACCCGCGGCGCCGAAGTTCGCCAGCGTGCTGCGTACCGCGACGTCACCG GGCGACTGCGTCAGCGGCAG
Product: hypothetical protein
Products: NA
Alternate protein names: Hydrolase Alpha/Beta Fold Family Protein; Hydrolase; Lysophospholipase
Number of amino acids: Translated: 326; Mature: 325
Protein sequence:
>326_residues MSRHDDAGADLPPEAMTVNQVVDDVAAVLDDARVDSAVVYGASYGTYIASGVGVRHPARVHGMVLDSPLLSRHDIVIVRR AIRRLLLRGDSPETASLAPKMRKLVDAGVMTATATQVVATIYGYGGARLLERQLDLLLDGRKLLWWTLSRFTTLGNLPFR YEEDLVSRIALRELDYAAEPDGLPLDPAVAEREVRTQTAAFEDEPYDLPAEMPNFDWPTAVVSGGRDLITPPAVAERVAS LLPHAVLLSLPDMAHSALDFHEAVALASADAVLRGDLAGLAARACTLNALPPRPEVRLLWALIAAAAIIEGALPIPAPLR RRLSCG
Sequences:
>Translated_326_residues MSRHDDAGADLPPEAMTVNQVVDDVAAVLDDARVDSAVVYGASYGTYIASGVGVRHPARVHGMVLDSPLLSRHDIVIVRR AIRRLLLRGDSPETASLAPKMRKLVDAGVMTATATQVVATIYGYGGARLLERQLDLLLDGRKLLWWTLSRFTTLGNLPFR YEEDLVSRIALRELDYAAEPDGLPLDPAVAEREVRTQTAAFEDEPYDLPAEMPNFDWPTAVVSGGRDLITPPAVAERVAS LLPHAVLLSLPDMAHSALDFHEAVALASADAVLRGDLAGLAARACTLNALPPRPEVRLLWALIAAAAIIEGALPIPAPLR RRLSCG >Mature_325_residues SRHDDAGADLPPEAMTVNQVVDDVAAVLDDARVDSAVVYGASYGTYIASGVGVRHPARVHGMVLDSPLLSRHDIVIVRRA IRRLLLRGDSPETASLAPKMRKLVDAGVMTATATQVVATIYGYGGARLLERQLDLLLDGRKLLWWTLSRFTTLGNLPFRY EEDLVSRIALRELDYAAEPDGLPLDPAVAEREVRTQTAAFEDEPYDLPAEMPNFDWPTAVVSGGRDLITPPAVAERVASL LPHAVLLSLPDMAHSALDFHEAVALASADAVLRGDLAGLAARACTLNALPPRPEVRLLWALIAAAAIIEGALPIPAPLRR RLSCG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35091; Mature: 34960
Theoretical pI: Translated: 5.07; Mature: 5.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRHDDAGADLPPEAMTVNQVVDDVAAVLDDARVDSAVVYGASYGTYIASGVGVRHPARV CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHCCCCCCCCHHH HGMVLDSPLLSRHDIVIVRRAIRRLLLRGDSPETASLAPKMRKLVDAGVMTATATQVVAT HCEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH IYGYGGARLLERQLDLLLDGRKLLWWTLSRFTTLGNLPFRYEEDLVSRIALRELDYAAEP HHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCC DGLPLDPAVAEREVRTQTAAFEDEPYDLPAEMPNFDWPTAVVSGGRDLITPPAVAERVAS CCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHH LLPHAVLLSLPDMAHSALDFHEAVALASADAVLRGDLAGLAARACTLNALPPRPEVRLLW HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH ALIAAAAIIEGALPIPAPLRRRLSCG HHHHHHHHHHCCCCCCHHHHHHCCCC >Mature Secondary Structure SRHDDAGADLPPEAMTVNQVVDDVAAVLDDARVDSAVVYGASYGTYIASGVGVRHPARV CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHCCCCCCCCHHH HGMVLDSPLLSRHDIVIVRRAIRRLLLRGDSPETASLAPKMRKLVDAGVMTATATQVVAT HCEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH IYGYGGARLLERQLDLLLDGRKLLWWTLSRFTTLGNLPFRYEEDLVSRIALRELDYAAEP HHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCC DGLPLDPAVAEREVRTQTAAFEDEPYDLPAEMPNFDWPTAVVSGGRDLITPPAVAERVAS CCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHH LLPHAVLLSLPDMAHSALDFHEAVALASADAVLRGDLAGLAARACTLNALPPRPEVRLLW HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH ALIAAAAIIEGALPIPAPLRRRLSCG HHHHHHHHHHCCCCCCHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA