| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41408591
Identifier: 41408591
GI number: 41408591
Start: 2798271
End: 2800901
Strand: Reverse
Name: 41408591
Synonym: MAP2493c
Alternate gene names: NA
Gene position: 2800901-2798271 (Counterclockwise)
Preceding gene: 41408592
Following gene: 41408590
Centisome position: 57.99
GC content: 72.67
Gene sequence:
>2631_bases GTGAAGCTGCACCGGCTGACCCTGACGAACTACCGCGGCATCGCGCACCGGGAAATCGAATTCCCCGACCACGGTGTGGT GGTGGTGTGCGGCGCCAACGAGATCGGCAAGTCGTCGATGATCGAGGCCCTGGATCTACTGCTGGAGGCCAAGGACCGCT CCACCAAGAAGGAAGTCAAACAGGTCAAGCCCACCCACAGCGACGTGGGTTCCGAGGTTTCGGCCGAAATCAGTTGCGGC CCATACCGATTCGTCTACCGCAAACGGTTCCACAAAAAGTGTGAGACGGAGCTGACGGTGATCACGCCGTACCGCGAACA GCTGACCGGCGACGAAGCCCACGAACGGGTCCGGGCGATGCTGGCCGAGACGGTGGACAGCGACCTGTGGCATGCCCAGC GCGTGCTGCAGGCGGCGTCGACCGCCGCGGTGGATCTGTCGGGGTGCGACGCGCTGTCCCGCGCGCTCGACGTCGCCGCC GGCGACAGCGGCGGGCTGTGCGGCACCGAGCCGTTGCTCATCGAACGCATCGACGCCGAATACGGGCGCTATTTCACCCC GACCGGACGCCCGACGGGGGAGTGGGCAGCCGCGATCGCCCGGCTGGCCGACGCCGAGGTCGCCGTCGCCGAGTGCGCGG CCGCCGTCGCCGAGGTCGACGAGCGGGTGTCCCGCCACGCCGCGTTGACCGAACAGGTGGCCGACCTGTCCCAGCGCCGC ATCGCCGCCGGCCCGCGAGTGACGGCCGCGCGGCAGGCCGCCGACCGGATCGCCGAGCTCACCGCCCAGCGCCGGGAAGC CCAGCTGGTCGCCGAGGCCGCGGCGGCCACCAAAGCCGCGGCGGCCCAGGCCCACTCCGGCCGGCTACAACTGCTCGCCG ACATCGACACCCGGGCCGCCGTCGTCACGCAGACACATGCTCAGGTCCAGCAGGCCGCGGCCGACCACGCGGCGGCCCAG GCCGACGCGCAGGCCTGCGACACCGCGCTGCAGCACGCCACCGAGGCCCTGGCCGAGCTGGAGCGCCGGGTGCAGGAGGC GCAGCGCACCGTCGAGCGGTTGGCCGGCCGCGAGGAGGCCGACCGGTTGGCCGCCCGGCTGGACAAAATTGATGCCATCC AGCGCGATCGCGAGCGCATCAGCGCCGAGCTGAGCACCATCGCGGTCACCGAGGAGTTGCTGCGCCGCATCGAGGACGCC GCCGCCGCGGTTGACCGCATCGGCGACCAGTTGGCGTCGACGTCGGCGGCCGTCGAATTCACCGCGGTCGCCGACATTCA CCTGGTGATCGGTGACCAGCAGGTGTCCCTGCCGGCGGGGCAGAGCTGGTCGATCACCGCCGCCGGGCCCACCGCGGTCG AGGTTCCCGGTGTGCTGACCGCCCGCGTCATCGCGGGCGCGACCACCCTGGATGTGCAAGCGAAACACGCTGCGGCGCAA CAAGAACTGGCCGCAGCGCTGACGGCGGGTGCCGTTGCCGACCTTGCCGCCGCCCGATCCGCCGACCAGCGTCGCCGCGA GCTGCAGGGCACTCGCGACCAGCTCGGCGCCACCCTGGCCGGATTGTGCGGCGACGAGCCGCTCGACGAGCTGCGGTCGC GGCTGGCCCGGCTGCGCGCCGAGCATCCGGAGCAGCCGGCCGAGCCGACGGGTGGGGCCGCCGACCTCGCCGCCGCCCGC ACCGAACTCGAAGCGCTCGCGCAGGCCCGCGCCTGCGCGTCGGCCGAATGCGACACGCGCCGTCAGGCCGCCACCGCCGC GGCCGCCAGGCTTGCCGAAACCGCAACGGCGGCAACGGTTCTGCAGAACAGGCTGGACACCCTGCGGGCCGAGCTGGACG CGGCCACCGGTCGGCTGGCCGCCGAGCGCGCGTCGGTCGGCGACGAGGAGCTGGCGGCGTCAGCCGATGCGGCGCTGCGC GCCGAGCAGGCCGCCGAACGCCGGGTCGCCGAACTCGCCGACGCCCTGGCCGCGGCGTCTCCGGACGCCGTCGCCGCCGA ATTAGCCGATGCCACACAGGAATCCGAGTCGCTGCGGGAGCGCTACGAAGAAGCGGCCGGCGCGCTGCGCGAGGTCACGA TCGAGCTGTCCGTCTTCGGCAGCGAGGGGCGCCAGGGCAAGCTCGACGCCGCGGAAACGGAGCGCGAGCACGCCGCCAGC GAGCACAGCCAAGTCGGCCGCCGGGCCCGCGCCGCCCAGCTGCTGCGCTCGGTCATGACGCGGCACCGCGACACCACCCG GCAGCGCTACGTCGAGCCCTACCGCGCGGAACTGCAGCGGCTCGGCCGTCCGGTGTTCGGCCCCACCTTCGAGGTCGACA TCGACAGCGACCTGTGCATCCGCAGCCGCACCCTCAACGGCATCACCGTGCCCTACGAGTCCCTGTCCGGCGGCGCCAAG GAGCAGCTGGGCATCCTGGCACGGCTGGCCGGCGCCGCGCTGGTCGCCAAGGAAGACGCCGTCCCGGTGGTGGTCGACGA CGCGCTCGGTTTCACCGACCCGGACCGGCTGGCCAAGATGGGGCAGCTGTTCGACAGCGTGGGAAGCCACGGGCAGGTGA TCGTGCTCACCTGCAGCCCGGACCGGTACGACGGCGTCAAGGGCGCGCACCGCATCGACCTCAGCGCTTAG
Upstream 100 bases:
>100_bases AGGAGCTGGTGGCGACCGCGCGCCAACAGGATTCCGACACCGCCGCCGACGCGCAGGGGGCGCTGGCGCTGCTGTTACGG CTCGCCGATCGGGGCGCGGC
Downstream 100 bases:
>100_bases CCCGCGCGGCCGAGCCGCCGGCCGGCCCCGCCTGCAGAATGGGACCATGGCGGTCCGACCCGAATGACGATGAACGCAAA GCGGCGGCGCATGCAGCAGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 876; Mature: 876
Protein sequence:
>876_residues MKLHRLTLTNYRGIAHREIEFPDHGVVVVCGANEIGKSSMIEALDLLLEAKDRSTKKEVKQVKPTHSDVGSEVSAEISCG PYRFVYRKRFHKKCETELTVITPYREQLTGDEAHERVRAMLAETVDSDLWHAQRVLQAASTAAVDLSGCDALSRALDVAA GDSGGLCGTEPLLIERIDAEYGRYFTPTGRPTGEWAAAIARLADAEVAVAECAAAVAEVDERVSRHAALTEQVADLSQRR IAAGPRVTAARQAADRIAELTAQRREAQLVAEAAAATKAAAAQAHSGRLQLLADIDTRAAVVTQTHAQVQQAAADHAAAQ ADAQACDTALQHATEALAELERRVQEAQRTVERLAGREEADRLAARLDKIDAIQRDRERISAELSTIAVTEELLRRIEDA AAAVDRIGDQLASTSAAVEFTAVADIHLVIGDQQVSLPAGQSWSITAAGPTAVEVPGVLTARVIAGATTLDVQAKHAAAQ QELAAALTAGAVADLAAARSADQRRRELQGTRDQLGATLAGLCGDEPLDELRSRLARLRAEHPEQPAEPTGGAADLAAAR TELEALAQARACASAECDTRRQAATAAAARLAETATAATVLQNRLDTLRAELDAATGRLAAERASVGDEELAASADAALR AEQAAERRVAELADALAAASPDAVAAELADATQESESLRERYEEAAGALREVTIELSVFGSEGRQGKLDAAETEREHAAS EHSQVGRRARAAQLLRSVMTRHRDTTRQRYVEPYRAELQRLGRPVFGPTFEVDIDSDLCIRSRTLNGITVPYESLSGGAK EQLGILARLAGAALVAKEDAVPVVVDDALGFTDPDRLAKMGQLFDSVGSHGQVIVLTCSPDRYDGVKGAHRIDLSA
Sequences:
>Translated_876_residues MKLHRLTLTNYRGIAHREIEFPDHGVVVVCGANEIGKSSMIEALDLLLEAKDRSTKKEVKQVKPTHSDVGSEVSAEISCG PYRFVYRKRFHKKCETELTVITPYREQLTGDEAHERVRAMLAETVDSDLWHAQRVLQAASTAAVDLSGCDALSRALDVAA GDSGGLCGTEPLLIERIDAEYGRYFTPTGRPTGEWAAAIARLADAEVAVAECAAAVAEVDERVSRHAALTEQVADLSQRR IAAGPRVTAARQAADRIAELTAQRREAQLVAEAAAATKAAAAQAHSGRLQLLADIDTRAAVVTQTHAQVQQAAADHAAAQ ADAQACDTALQHATEALAELERRVQEAQRTVERLAGREEADRLAARLDKIDAIQRDRERISAELSTIAVTEELLRRIEDA AAAVDRIGDQLASTSAAVEFTAVADIHLVIGDQQVSLPAGQSWSITAAGPTAVEVPGVLTARVIAGATTLDVQAKHAAAQ QELAAALTAGAVADLAAARSADQRRRELQGTRDQLGATLAGLCGDEPLDELRSRLARLRAEHPEQPAEPTGGAADLAAAR TELEALAQARACASAECDTRRQAATAAAARLAETATAATVLQNRLDTLRAELDAATGRLAAERASVGDEELAASADAALR AEQAAERRVAELADALAAASPDAVAAELADATQESESLRERYEEAAGALREVTIELSVFGSEGRQGKLDAAETEREHAAS EHSQVGRRARAAQLLRSVMTRHRDTTRQRYVEPYRAELQRLGRPVFGPTFEVDIDSDLCIRSRTLNGITVPYESLSGGAK EQLGILARLAGAALVAKEDAVPVVVDDALGFTDPDRLAKMGQLFDSVGSHGQVIVLTCSPDRYDGVKGAHRIDLSA >Mature_876_residues MKLHRLTLTNYRGIAHREIEFPDHGVVVVCGANEIGKSSMIEALDLLLEAKDRSTKKEVKQVKPTHSDVGSEVSAEISCG PYRFVYRKRFHKKCETELTVITPYREQLTGDEAHERVRAMLAETVDSDLWHAQRVLQAASTAAVDLSGCDALSRALDVAA GDSGGLCGTEPLLIERIDAEYGRYFTPTGRPTGEWAAAIARLADAEVAVAECAAAVAEVDERVSRHAALTEQVADLSQRR IAAGPRVTAARQAADRIAELTAQRREAQLVAEAAAATKAAAAQAHSGRLQLLADIDTRAAVVTQTHAQVQQAAADHAAAQ ADAQACDTALQHATEALAELERRVQEAQRTVERLAGREEADRLAARLDKIDAIQRDRERISAELSTIAVTEELLRRIEDA AAAVDRIGDQLASTSAAVEFTAVADIHLVIGDQQVSLPAGQSWSITAAGPTAVEVPGVLTARVIAGATTLDVQAKHAAAQ QELAAALTAGAVADLAAARSADQRRRELQGTRDQLGATLAGLCGDEPLDELRSRLARLRAEHPEQPAEPTGGAADLAAAR TELEALAQARACASAECDTRRQAATAAAARLAETATAATVLQNRLDTLRAELDAATGRLAAERASVGDEELAASADAALR AEQAAERRVAELADALAAASPDAVAAELADATQESESLRERYEEAAGALREVTIELSVFGSEGRQGKLDAAETEREHAAS EHSQVGRRARAAQLLRSVMTRHRDTTRQRYVEPYRAELQRLGRPVFGPTFEVDIDSDLCIRSRTLNGITVPYESLSGGAK EQLGILARLAGAALVAKEDAVPVVVDDALGFTDPDRLAKMGQLFDSVGSHGQVIVLTCSPDRYDGVKGAHRIDLSA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 93153; Mature: 93153
Theoretical pI: Translated: 4.95; Mature: 4.95
Prosite motif: PS00359 RIBOSOMAL_L11
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLHRLTLTNYRGIAHREIEFPDHGVVVVCGANEIGKSSMIEALDLLLEAKDRSTKKEVK CCCEEEEECCCCCCCEEECCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCHHHHHHH QVKPTHSDVGSEVSAEISCGPYRFVYRKRFHKKCETELTVITPYREQLTGDEAHERVRAM HCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEECCHHHHHCCHHHHHHHHHH LAETVDSDLWHAQRVLQAASTAAVDLSGCDALSRALDVAAGDSGGLCGTEPLLIERIDAE HHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHH YGRYFTPTGRPTGEWAAAIARLADAEVAVAECAAAVAEVDERVSRHAALTEQVADLSQRR HCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IAAGPRVTAARQAADRIAELTAQRREAQLVAEAAAATKAAAAQAHSGRLQLLADIDTRAA HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHH VVTQTHAQVQQAAADHAAAQADAQACDTALQHATEALAELERRVQEAQRTVERLAGREEA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH DRLAARLDKIDAIQRDRERISAELSTIAVTEELLRRIEDAAAAVDRIGDQLASTSAAVEF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEE TAVADIHLVIGDQQVSLPAGQSWSITAAGPTAVEVPGVLTARVIAGATTLDVQAKHAAAQ EEEEEEEEEECCCEEECCCCCCEEEEECCCCCEECCCHHHHHHHHCCCEEEHHHHHHHHH QELAAALTAGAVADLAAARSADQRRRELQGTRDQLGATLAGLCGDEPLDELRSRLARLRA HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHH EHPEQPAEPTGGAADLAAARTELEALAQARACASAECDTRRQAATAAAARLAETATAATV CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH LQNRLDTLRAELDAATGRLAAERASVGDEELAASADAALRAEQAAERRVAELADALAAAS HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC PDAVAAELADATQESESLRERYEEAAGALREVTIELSVFGSEGRQGKLDAAETEREHAAS CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCCCCCCCHHHHHHHHHHH EHSQVGRRARAAQLLRSVMTRHRDTTRQRYVEPYRAELQRLGRPVFGPTFEVDIDSDLCI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCEEEEECCCCHHH RSRTLNGITVPYESLSGGAKEQLGILARLAGAALVAKEDAVPVVVDDALGFTDPDRLAKM HHCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHEECCCCCCEEEECCCCCCCHHHHHHH GQLFDSVGSHGQVIVLTCSPDRYDGVKGAHRIDLSA HHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCC >Mature Secondary Structure MKLHRLTLTNYRGIAHREIEFPDHGVVVVCGANEIGKSSMIEALDLLLEAKDRSTKKEVK CCCEEEEECCCCCCCEEECCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCHHHHHHH QVKPTHSDVGSEVSAEISCGPYRFVYRKRFHKKCETELTVITPYREQLTGDEAHERVRAM HCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEECCHHHHHCCHHHHHHHHHH LAETVDSDLWHAQRVLQAASTAAVDLSGCDALSRALDVAAGDSGGLCGTEPLLIERIDAE HHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHH YGRYFTPTGRPTGEWAAAIARLADAEVAVAECAAAVAEVDERVSRHAALTEQVADLSQRR HCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IAAGPRVTAARQAADRIAELTAQRREAQLVAEAAAATKAAAAQAHSGRLQLLADIDTRAA HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHH VVTQTHAQVQQAAADHAAAQADAQACDTALQHATEALAELERRVQEAQRTVERLAGREEA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH DRLAARLDKIDAIQRDRERISAELSTIAVTEELLRRIEDAAAAVDRIGDQLASTSAAVEF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEE TAVADIHLVIGDQQVSLPAGQSWSITAAGPTAVEVPGVLTARVIAGATTLDVQAKHAAAQ EEEEEEEEEECCCEEECCCCCCEEEEECCCCCEECCCHHHHHHHHCCCEEEHHHHHHHHH QELAAALTAGAVADLAAARSADQRRRELQGTRDQLGATLAGLCGDEPLDELRSRLARLRA HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHH EHPEQPAEPTGGAADLAAARTELEALAQARACASAECDTRRQAATAAAARLAETATAATV CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH LQNRLDTLRAELDAATGRLAAERASVGDEELAASADAALRAEQAAERRVAELADALAAAS HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC PDAVAAELADATQESESLRERYEEAAGALREVTIELSVFGSEGRQGKLDAAETEREHAAS CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCCCCCCCHHHHHHHHHHH EHSQVGRRARAAQLLRSVMTRHRDTTRQRYVEPYRAELQRLGRPVFGPTFEVDIDSDLCI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCEEEEECCCCHHH RSRTLNGITVPYESLSGGAKEQLGILARLAGAALVAKEDAVPVVVDDALGFTDPDRLAKM HHCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHEECCCCCCEEEECCCCCCCHHHHHHH GQLFDSVGSHGQVIVLTCSPDRYDGVKGAHRIDLSA HHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]