| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41408585
Identifier: 41408585
GI number: 41408585
Start: 2790921
End: 2791412
Strand: Reverse
Name: 41408585
Synonym: MAP2487c
Alternate gene names: NA
Gene position: 2791412-2790921 (Counterclockwise)
Preceding gene: 41408590
Following gene: 41408583
Centisome position: 57.8
GC content: 65.85
Gene sequence:
>492_bases ATGGCGGTTACCGATGACTACCTGGCCCACAATGCCGGGTACGCGAGCAGCTTCGAGGGACCACTGCCGATGCCACCCAG CAAACATGTCGCGGTCGTCGCGTGCATGGACGCGCGGCTGGACGTGTATCGCATCCTCGGCCTGCGCGAGGGGGAGGCCC ACGTCATCCGAAACGCCGGCGGCGTCATCACCGACGACGTGGTCCGCTCACTGGCCATCAGCCAACGGCTGCTGGGAACC CGGGAGATCATCCTGATCCACCACACCGACTGCGGGATGCTCACCTTCACCGACGACGACTTCAAGCGCGGCATCCAGGA GGAGACCGGGATCAAACCGCCCTGGGCGGCGGAGGCCTTTGCGGATCTGGCCGAGGATGTCCGGCAGTCGCTGCGCCGTA TCGAGGCCAATCCGTTCGTCACCAAGCACGTCTCGGCCCGCGGATTCGTGTTCGACGTCGCCACGGGCAAGCTCGACGAG GTCAAGCCCTAG
Upstream 100 bases:
>100_bases ACCTTCCGATCGTGCTGATTGCCAACGGTGAAAATCAGGTACCCGATTGTTAAGATCCGTCGCGGCGGCAGTCCGCGTAG CAAATTTCGAGGAGACTGGC
Downstream 100 bases:
>100_bases ACCCGTGTAGTCAGCGCGAAAAAACGGCCCGAACGTCACCGTGGGTGCACGCTCGGCCGACAACTTGAGCGCCGGCCGAC ACAACTCGAGCGCCGGCCGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 163; Mature: 162
Protein sequence:
>163_residues MAVTDDYLAHNAGYASSFEGPLPMPPSKHVAVVACMDARLDVYRILGLREGEAHVIRNAGGVITDDVVRSLAISQRLLGT REIILIHHTDCGMLTFTDDDFKRGIQEETGIKPPWAAEAFADLAEDVRQSLRRIEANPFVTKHVSARGFVFDVATGKLDE VKP
Sequences:
>Translated_163_residues MAVTDDYLAHNAGYASSFEGPLPMPPSKHVAVVACMDARLDVYRILGLREGEAHVIRNAGGVITDDVVRSLAISQRLLGT REIILIHHTDCGMLTFTDDDFKRGIQEETGIKPPWAAEAFADLAEDVRQSLRRIEANPFVTKHVSARGFVFDVATGKLDE VKP >Mature_162_residues AVTDDYLAHNAGYASSFEGPLPMPPSKHVAVVACMDARLDVYRILGLREGEAHVIRNAGGVITDDVVRSLAISQRLLGTR EIILIHHTDCGMLTFTDDDFKRGIQEETGIKPPWAAEAFADLAEDVRQSLRRIEANPFVTKHVSARGFVFDVATGKLDEV KP
Specific function: Unknown
COG id: COG0288
COG function: function code P; Carbonic anhydrase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the beta-class carbonic anhydrase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001765 [H]
Pfam domain/function: PF00484 Pro_CA [H]
EC number: NA
Molecular weight: Translated: 17901; Mature: 17769
Theoretical pI: Translated: 5.57; Mature: 5.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVTDDYLAHNAGYASSFEGPLPMPPSKHVAVVACMDARLDVYRILGLREGEAHVIRNAG CCCCCCHHHCCCCCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHCCCCCCCEEEECCC GVITDDVVRSLAISQRLLGTREIILIHHTDCGMLTFTDDDFKRGIQEETGIKPPWAAEAF CEEHHHHHHHHHHHHHHCCCEEEEEEEECCCCEEEEECHHHHHCCHHHCCCCCCHHHHHH ADLAEDVRQSLRRIEANPFVTKHVSARGFVFDVATGKLDEVKP HHHHHHHHHHHHHHCCCCCEEEECCCCCEEEEECCCCCCCCCC >Mature Secondary Structure AVTDDYLAHNAGYASSFEGPLPMPPSKHVAVVACMDARLDVYRILGLREGEAHVIRNAG CCCCCHHHCCCCCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHCCCCCCCEEEECCC GVITDDVVRSLAISQRLLGTREIILIHHTDCGMLTFTDDDFKRGIQEETGIKPPWAAEAF CEEHHHHHHHHHHHHHHCCCEEEEEEEECCCCEEEEECHHHHHCCHHHCCCCCCHHHHHH ADLAEDVRQSLRRIEANPFVTKHVSARGFVFDVATGKLDEVKP HHHHHHHHHHHHHHCCCCCEEEECCCCCEEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]