Definition Mycobacterium avium subsp. paratuberculosis K-10, complete genome.
Accession NC_002944
Length 4,829,781

Click here to switch to the map view.

The map label for this gene is 41408585

Identifier: 41408585

GI number: 41408585

Start: 2790921

End: 2791412

Strand: Reverse

Name: 41408585

Synonym: MAP2487c

Alternate gene names: NA

Gene position: 2791412-2790921 (Counterclockwise)

Preceding gene: 41408590

Following gene: 41408583

Centisome position: 57.8

GC content: 65.85

Gene sequence:

>492_bases
ATGGCGGTTACCGATGACTACCTGGCCCACAATGCCGGGTACGCGAGCAGCTTCGAGGGACCACTGCCGATGCCACCCAG
CAAACATGTCGCGGTCGTCGCGTGCATGGACGCGCGGCTGGACGTGTATCGCATCCTCGGCCTGCGCGAGGGGGAGGCCC
ACGTCATCCGAAACGCCGGCGGCGTCATCACCGACGACGTGGTCCGCTCACTGGCCATCAGCCAACGGCTGCTGGGAACC
CGGGAGATCATCCTGATCCACCACACCGACTGCGGGATGCTCACCTTCACCGACGACGACTTCAAGCGCGGCATCCAGGA
GGAGACCGGGATCAAACCGCCCTGGGCGGCGGAGGCCTTTGCGGATCTGGCCGAGGATGTCCGGCAGTCGCTGCGCCGTA
TCGAGGCCAATCCGTTCGTCACCAAGCACGTCTCGGCCCGCGGATTCGTGTTCGACGTCGCCACGGGCAAGCTCGACGAG
GTCAAGCCCTAG

Upstream 100 bases:

>100_bases
ACCTTCCGATCGTGCTGATTGCCAACGGTGAAAATCAGGTACCCGATTGTTAAGATCCGTCGCGGCGGCAGTCCGCGTAG
CAAATTTCGAGGAGACTGGC

Downstream 100 bases:

>100_bases
ACCCGTGTAGTCAGCGCGAAAAAACGGCCCGAACGTCACCGTGGGTGCACGCTCGGCCGACAACTTGAGCGCCGGCCGAC
ACAACTCGAGCGCCGGCCGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 163; Mature: 162

Protein sequence:

>163_residues
MAVTDDYLAHNAGYASSFEGPLPMPPSKHVAVVACMDARLDVYRILGLREGEAHVIRNAGGVITDDVVRSLAISQRLLGT
REIILIHHTDCGMLTFTDDDFKRGIQEETGIKPPWAAEAFADLAEDVRQSLRRIEANPFVTKHVSARGFVFDVATGKLDE
VKP

Sequences:

>Translated_163_residues
MAVTDDYLAHNAGYASSFEGPLPMPPSKHVAVVACMDARLDVYRILGLREGEAHVIRNAGGVITDDVVRSLAISQRLLGT
REIILIHHTDCGMLTFTDDDFKRGIQEETGIKPPWAAEAFADLAEDVRQSLRRIEANPFVTKHVSARGFVFDVATGKLDE
VKP
>Mature_162_residues
AVTDDYLAHNAGYASSFEGPLPMPPSKHVAVVACMDARLDVYRILGLREGEAHVIRNAGGVITDDVVRSLAISQRLLGTR
EIILIHHTDCGMLTFTDDDFKRGIQEETGIKPPWAAEAFADLAEDVRQSLRRIEANPFVTKHVSARGFVFDVATGKLDEV
KP

Specific function: Unknown

COG id: COG0288

COG function: function code P; Carbonic anhydrase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the beta-class carbonic anhydrase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001765 [H]

Pfam domain/function: PF00484 Pro_CA [H]

EC number: NA

Molecular weight: Translated: 17901; Mature: 17769

Theoretical pI: Translated: 5.57; Mature: 5.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVTDDYLAHNAGYASSFEGPLPMPPSKHVAVVACMDARLDVYRILGLREGEAHVIRNAG
CCCCCCHHHCCCCCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHCCCCCCCEEEECCC
GVITDDVVRSLAISQRLLGTREIILIHHTDCGMLTFTDDDFKRGIQEETGIKPPWAAEAF
CEEHHHHHHHHHHHHHHCCCEEEEEEEECCCCEEEEECHHHHHCCHHHCCCCCCHHHHHH
ADLAEDVRQSLRRIEANPFVTKHVSARGFVFDVATGKLDEVKP
HHHHHHHHHHHHHHCCCCCEEEECCCCCEEEEECCCCCCCCCC
>Mature Secondary Structure 
AVTDDYLAHNAGYASSFEGPLPMPPSKHVAVVACMDARLDVYRILGLREGEAHVIRNAG
CCCCCHHHCCCCCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHCCCCCCCEEEECCC
GVITDDVVRSLAISQRLLGTREIILIHHTDCGMLTFTDDDFKRGIQEETGIKPPWAAEAF
CEEHHHHHHHHHHHHHHCCCEEEEEEEECCCCEEEEECHHHHHCCHHHCCCCCCHHHHHH
ADLAEDVRQSLRRIEANPFVTKHVSARGFVFDVATGKLDEVKP
HHHHHHHHHHHHHHCCCCCEEEECCCCCEEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]