| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is rfe
Identifier: 41408557
GI number: 41408557
Start: 2763778
End: 2765001
Strand: Reverse
Name: rfe
Synonym: MAP2459c
Alternate gene names: 41408557
Gene position: 2765001-2763778 (Counterclockwise)
Preceding gene: 41408558
Following gene: 41408556
Centisome position: 57.25
GC content: 69.12
Gene sequence:
>1224_bases TTGTCCAGTACGGTCTCGTTGGTGTCCAGCGACGTAACCGACCTTGCCGGTGGTTTGCTCGCCCTTTCCGACCGCGGCGC CGGTGTTCCGCTGCGCGAGCTGGCACTGGTGGGGCTGACCGCGGCCATCATCACCTACTTCGCGACCGGGCCGGTGCGGG TGCTGGCCACCCGGCTGGGCGCGGTCGCCTATCCGCGCGAGCGCGACGTGCACGTGACGCCCACCCCGCGGATGGGCGGC CTGGCCATGTTTCTCGGTGTCGTCTGCGCCGTCTTCCTGGCCTCGCAGCTGCCGGCGCTCACCCGCGGGTTCGTCTACTC CAGCGGCATGCCCGCCGTCCTGGTGGCCGGCGCTGTCATCATGGGCATCGGCCTGATCGACGACCGCTGGGGCCTGGACG CGCTGACCAAATTCGCCGGTCAGATCACCGCGGCCAGCGTGCTGGTCACCATGGGCGTGGCGTGGAGCGTGCTGTACATC CCGATCGGCGGCGTCGGCACCATCGTGCTGGACCAGGCCTCGTCGATCCTGCTGACCCTGGCGCTGACCGTGTCGGTGGT CAACGCGATGAACTTCGTCGACGGGCTCGACGGTCTGGCCGCCGGGCTGGGTCTCATCACCGCCCTGGCGATCTGCATGT TCTCCGTCGGGCTGCTGCGCGACCACGGCGGCGACGTGCTGTTCTATCCGCCCGCCGTGATCTCGGTGGTGCTGGCCGGG GCGTGCCTGGGCTTCCTGCCGCACAACTTCCATCGCGCCAAGATCTTCATGGGCGACTCCGGCTCCATGCTGATCGGGTT GATGCTGGCCGCGGCGTCGACGACGGCGGCCGGCCCGGTCTCGCAGAACGCCTACGGCGCGCGCGACGTCTTCGCGCTGC TCTCGCCGTTCCTGCTGGTCGCGGCGGTCATCTTCGTGCCGATGCTGGATTTGCTGCTGGCCATCGTGCGGCGCACCCGG GCGGGCCGCAGCGCGTTCAGCCCCGACAAGATGCACCTGCATCACCGGTTGCTGCAGATCGGCCATTCGCACCGCCGGGT GGTGTTGCTGATCTACCTGTGGGTCGGCATCGTGGCGTTCGGCGCGGCGAGCACCATTTTCTTCCGCCCCCGCGACACCG CGGCGGTGATGCTGGGCGCCATCGTGGTCGCCGGGATCGCGACGGCCATACCGCTGTTACGCCGCGGCGACGACTACGAA GACGAAGAGTACGACAGGCAGTAG
Upstream 100 bases:
>100_bases CGGGCCCGGTGAGCGCGCAGCGGATCGCGGCAGTGCTCGGCATCGACCCGGAAAGCCTGGCCGTCCCGGGCTGACCGAAG CGGTTGTCGAGGTCCCAGCT
Downstream 100 bases:
>100_bases TAGTGGGCTTCGGCCTGTGGTACGGTGCAGGTAGAACCCCAAAAAGCCGCGCAGGCGACCGGTCCGTCGGAGGCTGCTCC GATCGGGCCGGTGCAAGACC
Product: hypothetical protein
Products: UMP; Undecaprenyl N-Acetyl-Alpha-D-Glucosaminyl Pyrophosphate. [C]
Alternate protein names: UDP-GlcNAc:undecaprenyl-phosphate GlcNAc-1-phosphate transferase; Undecaprenyl-Phosphate GlcNAc-1-phosphate transferase [H]
Number of amino acids: Translated: 407; Mature: 406
Protein sequence:
>407_residues MSSTVSLVSSDVTDLAGGLLALSDRGAGVPLRELALVGLTAAIITYFATGPVRVLATRLGAVAYPRERDVHVTPTPRMGG LAMFLGVVCAVFLASQLPALTRGFVYSSGMPAVLVAGAVIMGIGLIDDRWGLDALTKFAGQITAASVLVTMGVAWSVLYI PIGGVGTIVLDQASSILLTLALTVSVVNAMNFVDGLDGLAAGLGLITALAICMFSVGLLRDHGGDVLFYPPAVISVVLAG ACLGFLPHNFHRAKIFMGDSGSMLIGLMLAAASTTAAGPVSQNAYGARDVFALLSPFLLVAAVIFVPMLDLLLAIVRRTR AGRSAFSPDKMHLHHRLLQIGHSHRRVVLLIYLWVGIVAFGAASTIFFRPRDTAAVMLGAIVVAGIATAIPLLRRGDDYE DEEYDRQ
Sequences:
>Translated_407_residues MSSTVSLVSSDVTDLAGGLLALSDRGAGVPLRELALVGLTAAIITYFATGPVRVLATRLGAVAYPRERDVHVTPTPRMGG LAMFLGVVCAVFLASQLPALTRGFVYSSGMPAVLVAGAVIMGIGLIDDRWGLDALTKFAGQITAASVLVTMGVAWSVLYI PIGGVGTIVLDQASSILLTLALTVSVVNAMNFVDGLDGLAAGLGLITALAICMFSVGLLRDHGGDVLFYPPAVISVVLAG ACLGFLPHNFHRAKIFMGDSGSMLIGLMLAAASTTAAGPVSQNAYGARDVFALLSPFLLVAAVIFVPMLDLLLAIVRRTR AGRSAFSPDKMHLHHRLLQIGHSHRRVVLLIYLWVGIVAFGAASTIFFRPRDTAAVMLGAIVVAGIATAIPLLRRGDDYE DEEYDRQ >Mature_406_residues SSTVSLVSSDVTDLAGGLLALSDRGAGVPLRELALVGLTAAIITYFATGPVRVLATRLGAVAYPRERDVHVTPTPRMGGL AMFLGVVCAVFLASQLPALTRGFVYSSGMPAVLVAGAVIMGIGLIDDRWGLDALTKFAGQITAASVLVTMGVAWSVLYIP IGGVGTIVLDQASSILLTLALTVSVVNAMNFVDGLDGLAAGLGLITALAICMFSVGLLRDHGGDVLFYPPAVISVVLAGA CLGFLPHNFHRAKIFMGDSGSMLIGLMLAAASTTAAGPVSQNAYGARDVFALLSPFLLVAAVIFVPMLDLLLAIVRRTRA GRSAFSPDKMHLHHRLLQIGHSHRRVVLLIYLWVGIVAFGAASTIFFRPRDTAAVMLGAIVVAGIATAIPLLRRGDDYED EEYDRQ
Specific function: Catalyzes the transfer of the GlcNAc-1-phosphate moiety from UDP-GlcNAc onto the carrier lipid undecaprenyl phosphate (C55-P), yielding GlcNAc-pyrophosphoryl-undecaprenyl (GlcNAc-PP- C55), the lipid intermediate involved in the synthesis of various bacter
COG id: COG0472
COG function: function code M; UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 4 family. WecA subfamily [H]
Homologues:
Organism=Escherichia coli, GI1790218, Length=313, Percent_Identity=30.3514376996805, Blast_Score=94, Evalue=2e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000715 [H]
Pfam domain/function: PF00953 Glycos_transf_4 [H]
EC number: 2.7.8.- [C]
Molecular weight: Translated: 42594; Mature: 42463
Theoretical pI: Translated: 8.11; Mature: 8.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSTVSLVSSDVTDLAGGLLALSDRGAGVPLRELALVGLTAAIITYFATGPVRVLATRLG CCCHHHHHHHHHHHHHCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH AVAYPRERDVHVTPTPRMGGLAMFLGVVCAVFLASQLPALTRGFVYSSGMPAVLVAGAVI HHCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCHHHHHHHHHH MGIGLIDDRWGLDALTKFAGQITAASVLVTMGVAWSVLYIPIGGVGTIVLDQASSILLTL HHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHH ALTVSVVNAMNFVDGLDGLAAGLGLITALAICMFSVGLLRDHGGDVLFYPPAVISVVLAG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHH ACLGFLPHNFHRAKIFMGDSGSMLIGLMLAAASTTAAGPVSQNAYGARDVFALLSPFLLV HHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHH AAVIFVPMLDLLLAIVRRTRAGRSAFSPDKMHLHHRLLQIGHSHRRVVLLIYLWVGIVAF HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH GAASTIFFRPRDTAAVMLGAIVVAGIATAIPLLRRGDDYEDEEYDRQ CCHHEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCC >Mature Secondary Structure SSTVSLVSSDVTDLAGGLLALSDRGAGVPLRELALVGLTAAIITYFATGPVRVLATRLG CCHHHHHHHHHHHHHCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH AVAYPRERDVHVTPTPRMGGLAMFLGVVCAVFLASQLPALTRGFVYSSGMPAVLVAGAVI HHCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCHHHHHHHHHH MGIGLIDDRWGLDALTKFAGQITAASVLVTMGVAWSVLYIPIGGVGTIVLDQASSILLTL HHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHH ALTVSVVNAMNFVDGLDGLAAGLGLITALAICMFSVGLLRDHGGDVLFYPPAVISVVLAG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHH ACLGFLPHNFHRAKIFMGDSGSMLIGLMLAAASTTAAGPVSQNAYGARDVFALLSPFLLV HHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHH AAVIFVPMLDLLLAIVRRTRAGRSAFSPDKMHLHHRLLQIGHSHRRVVLLIYLWVGIVAF HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH GAASTIFFRPRDTAAVMLGAIVVAGIATAIPLLRRGDDYEDEEYDRQ CCHHEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: UDP-N-Acetyl-D-Glucosamine; Undecaprenyl Phosphate [C]
Specific reaction: UDP-N-Acetyl-D-Glucosamine + Undecaprenyl Phosphate = UMP + Undecaprenyl N-Acetyl-Alpha-D-Glucosaminyl Pyrophosphate. [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]