Definition Mycobacterium avium subsp. paratuberculosis K-10, complete genome.
Accession NC_002944
Length 4,829,781

Click here to switch to the map view.

The map label for this gene is 41408556

Identifier: 41408556

GI number: 41408556

Start: 2763080

End: 2763562

Strand: Reverse

Name: 41408556

Synonym: MAP2458c

Alternate gene names: NA

Gene position: 2763562-2763080 (Counterclockwise)

Preceding gene: 41408557

Following gene: 41408555

Centisome position: 57.22

GC content: 67.49

Gene sequence:

>483_bases
GTGACGACACCAGCGCAGGACGCGCCGTTGGTGTTCCCCTCTGTTGCTTTCCGTCCGGTTCGGCTGTTCGCGATCAGCGT
TGCCATCACCGCGGTGGCGGTGCTCGCCGCCGGACTGTCCGGTCACCTGATGGTCGGGGTCTTCTTCGGCATCGGGTTGC
TGCTGGGTTTGCTCAACGCCGTACTGGTGCGCCGCTCGGTTGACTCGATCACCGCCAAGGAGCACCCGCTGAAGAGGTCG
ATGGCGGTCAACTCGGCGTCCCGGCTGGCCATCATCACCGTCGTCGGGCTGATCATCGCCTACCTGTTCCGGCCCGCCGG
CCTGGGCGTGCTGTTCGGGCTGGCGCTGTTCCAGGTCCTCTTGGTGGCATCGACGGCGCTGCCGGTGTGGAAGAAACTGC
GTGCCGGTGACTGGGCGCCGTCCGCCGACGGCGCCGCCGCGGGGTCGGACGGAACGGAAGGAAGGAACAGCACCGATGCC
TGA

Upstream 100 bases:

>100_bases
CCCTTGGGTGATTCAACTGTGACGTGCGATACGCTCGGCGGGCCACCGATCAGTCGGTCGGGGGGTTCCCGTTCCACCAA
CCTGGGATTGAGGTGCTGCA

Downstream 100 bases:

>100_bases
GACGACGTTCCTGGCCGAATCCGCCATCGAGGTCGGCGAACACAACCACGCCACCTGGTTGGGCATGACCGTCAACACCG
ACACGATTCTGTCGACCGGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 160; Mature: 159

Protein sequence:

>160_residues
MTTPAQDAPLVFPSVAFRPVRLFAISVAITAVAVLAAGLSGHLMVGVFFGIGLLLGLLNAVLVRRSVDSITAKEHPLKRS
MAVNSASRLAIITVVGLIIAYLFRPAGLGVLFGLALFQVLLVASTALPVWKKLRAGDWAPSADGAAAGSDGTEGRNSTDA

Sequences:

>Translated_160_residues
MTTPAQDAPLVFPSVAFRPVRLFAISVAITAVAVLAAGLSGHLMVGVFFGIGLLLGLLNAVLVRRSVDSITAKEHPLKRS
MAVNSASRLAIITVVGLIIAYLFRPAGLGVLFGLALFQVLLVASTALPVWKKLRAGDWAPSADGAAAGSDGTEGRNSTDA
>Mature_159_residues
TTPAQDAPLVFPSVAFRPVRLFAISVAITAVAVLAAGLSGHLMVGVFFGIGLLLGLLNAVLVRRSVDSITAKEHPLKRSM
AVNSASRLAIITVVGLIIAYLFRPAGLGVLFGLALFQVLLVASTALPVWKKLRAGDWAPSADGAAAGSDGTEGRNSTDA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.leprae ML1138 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005598 [H]

Pfam domain/function: PF03899 ATP_synt_I [H]

EC number: NA

Molecular weight: Translated: 16492; Mature: 16360

Theoretical pI: Translated: 11.13; Mature: 11.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTPAQDAPLVFPSVAFRPVRLFAISVAITAVAVLAAGLSGHLMVGVFFGIGLLLGLLNA
CCCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
VLVRRSVDSITAKEHPLKRSMAVNSASRLAIITVVGLIIAYLFRPAGLGVLFGLALFQVL
HHHHHHHHHHHHHHCHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
LVASTALPVWKKLRAGDWAPSADGAAAGSDGTEGRNSTDA
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TTPAQDAPLVFPSVAFRPVRLFAISVAITAVAVLAAGLSGHLMVGVFFGIGLLLGLLNA
CCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
VLVRRSVDSITAKEHPLKRSMAVNSASRLAIITVVGLIIAYLFRPAGLGVLFGLALFQVL
HHHHHHHHHHHHHHCHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
LVASTALPVWKKLRAGDWAPSADGAAAGSDGTEGRNSTDA
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]