Definition Mycobacterium avium subsp. paratuberculosis K-10, complete genome.
Accession NC_002944
Length 4,829,781

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The map label for this gene is 41408526

Identifier: 41408526

GI number: 41408526

Start: 2723604

End: 2724191

Strand: Reverse

Name: 41408526

Synonym: MAP2428c

Alternate gene names: NA

Gene position: 2724191-2723604 (Counterclockwise)

Preceding gene: 41408527

Following gene: 41408525

Centisome position: 56.4

GC content: 67.86

Gene sequence:

>588_bases
GTGCGCAAGTGGAAGCGGGTCGAGACTGCGGAAGGTCCCCGTTTTCGGTCCGCCCTGGCCTCCCATGAGGCCGCGCTGCT
CAAAAACCTGGCCACCGCGATGATCGGGCTGCTCGATGAGCGTGAATCCTCTTCGCCGGCAGACGAACTCGAGGAAATCA
CCGGCATCAAGACCGGGAACGCGCAACCACCGAAGGATCCGACGCTGCGCCGGCTGCTGCCCGACTTCTACCGGCCCGAC
GACAACGGCGACGAGTCGCCCGATGCCGCCGAGAGCCTGAACGCCGCGCTGCGCAGCCTGCACGAGCCCGGCATCGTCAA
CGCCAAACGCGTTGCCGCACAGCGCTTGTTGGGCACCGTCCCCGACGACGGCGGCCGGTTCGAGTTGACCGAGGACGACG
CGAACGCCTGGATCGCGGCGGTCAACGACATCCGGCTGACGCTGGGCGTCATGCTCGAAATCGGGCCGGACGGCCCGGAG
CGGCTGCCGGCCGACCATCCGCTGGCCGTGCACTTCGACGTCTACCAGTGGCTGACCGTGCTGCAGGAGTACCTGGTCCT
GGTGCTCATGGGGCCCCGGTCATCGTGA

Upstream 100 bases:

>100_bases
CCGCGAGGCCATGGAAGTGGACGTGTCCAAACTGCATGCCGCCGGTTTGTGGGCGACCATGCAGCAGGACCGCTGAGATT
CGGGGCACCGGCGATTTCCT

Downstream 100 bases:

>100_bases
CGGCTCGGCGATGAACGCCATCACCGACGTCGGCGGCATCCGCGTCGGCCACCACCAGCGATTGGATCCCGACGCGTCGC
TGGGCGCCGGCTGGGCCTGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 195; Mature: 195

Protein sequence:

>195_residues
MRKWKRVETAEGPRFRSALASHEAALLKNLATAMIGLLDERESSSPADELEEITGIKTGNAQPPKDPTLRRLLPDFYRPD
DNGDESPDAAESLNAALRSLHEPGIVNAKRVAAQRLLGTVPDDGGRFELTEDDANAWIAAVNDIRLTLGVMLEIGPDGPE
RLPADHPLAVHFDVYQWLTVLQEYLVLVLMGPRSS

Sequences:

>Translated_195_residues
MRKWKRVETAEGPRFRSALASHEAALLKNLATAMIGLLDERESSSPADELEEITGIKTGNAQPPKDPTLRRLLPDFYRPD
DNGDESPDAAESLNAALRSLHEPGIVNAKRVAAQRLLGTVPDDGGRFELTEDDANAWIAAVNDIRLTLGVMLEIGPDGPE
RLPADHPLAVHFDVYQWLTVLQEYLVLVLMGPRSS
>Mature_195_residues
MRKWKRVETAEGPRFRSALASHEAALLKNLATAMIGLLDERESSSPADELEEITGIKTGNAQPPKDPTLRRLLPDFYRPD
DNGDESPDAAESLNAALRSLHEPGIVNAKRVAAQRLLGTVPDDGGRFELTEDDANAWIAAVNDIRLTLGVMLEIGPDGPE
RLPADHPLAVHFDVYQWLTVLQEYLVLVLMGPRSS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.leprae ML1166 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018561 [H]

Pfam domain/function: PF09438 DUF2017 [H]

EC number: NA

Molecular weight: Translated: 21426; Mature: 21426

Theoretical pI: Translated: 4.56; Mature: 4.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKWKRVETAEGPRFRSALASHEAALLKNLATAMIGLLDERESSSPADELEEITGIKTGN
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCC
AQPPKDPTLRRLLPDFYRPDDNGDESPDAAESLNAALRSLHEPGIVNAKRVAAQRLLGTV
CCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCC
PDDGGRFELTEDDANAWIAAVNDIRLTLGVMLEIGPDGPERLPADHPLAVHFDVYQWLTV
CCCCCEEEEECCCCCEEEHHHHHHHEEEEEEEEECCCCHHHCCCCCCEEEEHHHHHHHHH
LQEYLVLVLMGPRSS
HHHHHHHHHCCCCCC
>Mature Secondary Structure
MRKWKRVETAEGPRFRSALASHEAALLKNLATAMIGLLDERESSSPADELEEITGIKTGN
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCC
AQPPKDPTLRRLLPDFYRPDDNGDESPDAAESLNAALRSLHEPGIVNAKRVAAQRLLGTV
CCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCC
PDDGGRFELTEDDANAWIAAVNDIRLTLGVMLEIGPDGPERLPADHPLAVHFDVYQWLTV
CCCCCEEEEECCCCCEEEHHHHHHHEEEEEEEEECCCCHHHCCCCCCEEEEHHHHHHHHH
LQEYLVLVLMGPRSS
HHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]