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The map label for this gene is clpS

Identifier: 41408527

GI number: 41408527

Start: 2724216

End: 2724533

Strand: Reverse

Name: clpS

Synonym: MAP2429c

Alternate gene names: 41408527

Gene position: 2724533-2724216 (Counterclockwise)

Preceding gene: 41408530

Following gene: 41408526

Centisome position: 56.41

GC content: 63.52

Gene sequence:

>318_bases
ATGGTTGTTATGTCAGCGCCCACCGAGCCGAAGTCCAGGCCGGGCACTACAGGACAACGCGAGTCCGCTCCCGAGGACGT
CACGGCCAGCCCGTGGGTCACGATCGTCTGGGACGACCCGGTCAACCTGATGACCTACGTGACCTACGTGTTCCAGAAGT
TGTTCGGCTACAGCGAACCGCACGCCACCAAGCTGATGCTGCAGGTGCACAACGAGGGAAAGGCCGTGGTGTCCGCGGGC
AGCCGCGAGGCCATGGAAGTGGACGTGTCCAAACTGCATGCCGCCGGTTTGTGGGCGACCATGCAGCAGGACCGCTGA

Upstream 100 bases:

>100_bases
GGTCAGGAGCCCAGTGACGACCGGGTCGTTCATTCCATAACGGTATCGGCTGCGAATCGGGGCTCGGTAACGTCGTCCAT
CCCTCGGTATCGTGGGGGCC

Downstream 100 bases:

>100_bases
GATTCGGGGCACCGGCGATTTCCTGTGCGCAAGTGGAAGCGGGTCGAGACTGCGGAAGGTCCCCGTTTTCGGTCCGCCCT
GGCCTCCCATGAGGCCGCGC

Product: ATP-dependent Clp protease adaptor protein ClpS

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 105; Mature: 105

Protein sequence:

>105_residues
MVVMSAPTEPKSRPGTTGQRESAPEDVTASPWVTIVWDDPVNLMTYVTYVFQKLFGYSEPHATKLMLQVHNEGKAVVSAG
SREAMEVDVSKLHAAGLWATMQQDR

Sequences:

>Translated_105_residues
MVVMSAPTEPKSRPGTTGQRESAPEDVTASPWVTIVWDDPVNLMTYVTYVFQKLFGYSEPHATKLMLQVHNEGKAVVSAG
SREAMEVDVSKLHAAGLWATMQQDR
>Mature_105_residues
MVVMSAPTEPKSRPGTTGQRESAPEDVTASPWVTIVWDDPVNLMTYVTYVFQKLFGYSEPHATKLMLQVHNEGKAVVSAG
SREAMEVDVSKLHAAGLWATMQQDR

Specific function: Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation

COG id: COG2127

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ClpS family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): CLPS_MYCA1 (A0QCZ8)

Other databases:

- EMBL:   CP000479
- RefSeq:   YP_880786.1
- ProteinModelPortal:   A0QCZ8
- SMR:   A0QCZ8
- STRING:   A0QCZ8
- EnsemblBacteria:   EBMYCT00000009928
- GeneID:   4526600
- GenomeReviews:   CP000479_GR
- KEGG:   mav:MAV_1551
- TIGR:   MAV_1551
- eggNOG:   COG2127
- GeneTree:   EBGT00050000017021
- HOGENOM:   HBG545468
- OMA:   GLWATLQ
- ProtClustDB:   PRK00033
- BioCyc:   MAVI243243:MAV_1551-MONOMER
- HAMAP:   MF_00302
- InterPro:   IPR022935
- InterPro:   IPR003769
- InterPro:   IPR014719
- Gene3D:   G3DSA:3.30.1390.10

Pfam domain/function: PF02617 ClpS; SSF54736 Ribosomal_L7/12_C/ClpS-like

EC number: NA

Molecular weight: Translated: 11593; Mature: 11593

Theoretical pI: Translated: 5.59; Mature: 5.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.7 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.7 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVVMSAPTEPKSRPGTTGQRESAPEDVTASPWVTIVWDDPVNLMTYVTYVFQKLFGYSEP
CEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCC
HATKLMLQVHNEGKAVVSAGSREAMEVDVSKLHAAGLWATMQQDR
CCEEEEEEECCCCCEEEECCCCCCEEHHHHHHHHHHHEEECCCCC
>Mature Secondary Structure
MVVMSAPTEPKSRPGTTGQRESAPEDVTASPWVTIVWDDPVNLMTYVTYVFQKLFGYSEP
CEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCC
HATKLMLQVHNEGKAVVSAGSREAMEVDVSKLHAAGLWATMQQDR
CCEEEEEEECCCCCEEEECCCCCCEEHHHHHHHHHHHEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA