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The map label for this gene is 41408524

Identifier: 41408524

GI number: 41408524

Start: 2722281

End: 2722499

Strand: Reverse

Name: 41408524

Synonym: MAP2426c

Alternate gene names: NA

Gene position: 2722499-2722281 (Counterclockwise)

Preceding gene: 41408525

Following gene: 41408523

Centisome position: 56.37

GC content: 70.32

Gene sequence:

>219_bases
ATGGGTAAGACCACCGGACGGGCACCTGCCGCCCAGACCAAGAAGCGGTCCACGGCGGCGGCGGGCGCCACCACCATCGT
CACCTTCGTCGCGCTGCTCTACCTCGTCGAGCTGATCGACCAGCTGACCCGCCACGCCCTGGACGTCCACGGCATCCGGC
CGCAGCGGGTCGACGGCCTGTGGGGCATCGTCTTCGCCCCGGTGCTGCACGAGAGCTGA

Upstream 100 bases:

>100_bases
CCGGCATCCCGAGCTACCGGGACGTGCTGCCCGGCGCGCTGGGCCGGTGAACGCCGACCGGTAGCCTTGACGATGCTGGC
AGCGCGCTGGAAGGGCAGCC

Downstream 100 bases:

>100_bases
CAGCACCTGATGGCCAACACCGTGCCGCTGCTGGTGCTCGGATTCCTGATGACGCTGGCCGGGCTGGCCCGGTTCGTCTG
GGCGACCGTGATCATCTGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 72; Mature: 71

Protein sequence:

>72_residues
MGKTTGRAPAAQTKKRSTAAAGATTIVTFVALLYLVELIDQLTRHALDVHGIRPQRVDGLWGIVFAPVLHES

Sequences:

>Translated_72_residues
MGKTTGRAPAAQTKKRSTAAAGATTIVTFVALLYLVELIDQLTRHALDVHGIRPQRVDGLWGIVFAPVLHES
>Mature_71_residues
GKTTGRAPAAQTKKRSTAAAGATTIVTFVALLYLVELIDQLTRHALDVHGIRPQRVDGLWGIVFAPVLHES

Specific function: Unknown

COG id: COG0705

COG function: function code R; Uncharacterized membrane protein (homolog of Drosophila rhomboid)

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.tuberculosis Rv1337 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002610
- InterPro:   IPR022764 [H]

Pfam domain/function: PF01694 Rhomboid [H]

EC number: NA

Molecular weight: Translated: 7737; Mature: 7606

Theoretical pI: Translated: 10.61; Mature: 10.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGKTTGRAPAAQTKKRSTAAAGATTIVTFVALLYLVELIDQLTRHALDVHGIRPQRVDGL
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH
WGIVFAPVLHES
HHHHHHHHHCCC
>Mature Secondary Structure 
GKTTGRAPAAQTKKRSTAAAGATTIVTFVALLYLVELIDQLTRHALDVHGIRPQRVDGL
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH
WGIVFAPVLHES
HHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11234002 [H]