| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is cyp108 [H]
Identifier: 41408469
GI number: 41408469
Start: 2664734
End: 2665969
Strand: Reverse
Name: cyp108 [H]
Synonym: MAP2371c
Alternate gene names: 41408469
Gene position: 2665969-2664734 (Counterclockwise)
Preceding gene: 41408471
Following gene: 41408468
Centisome position: 55.2
GC content: 66.26
Gene sequence:
>1236_bases GTGAGCACAACCACGATGGACGAGGCCGCCAAGTTGCTGGCCGATCCGATGGCCTACACCGACGAGCAGCGACTGCATGC GGCACTGACCCACCTGCGCGCCAACGCCCCGGTGTCCTGGGTGGAGGTGCCGAACTACAAGCCGTTCTGGGCGATCACCA AACACGCCGACGTCATGGACATCGAGCGGGAGAACATGCTGTTCACCAACTGGCCGCGCCCGGTGCTGACCACCGCCGAG GGCGACGAGATGCAGGCCGCCGCGGGGGTGCGCACCCTGATCCACATGGACGACCCCCAGCACCGGGTGGTGCGCGCCAT CGGCTCGGACTGGTTCCGGCCAAAGGCGATGCGGGCGTTGAAGGTTCGCGTCGACGAGCTGGCCAAGATCTACGTCGACA AGATGCTGGCGGCCGGACCGGAATGCGACTTCGTCCAGGAGGTCGCGGTCAATTACCCCCTCTACGTGATCATGTCGCTG CTGGGCCTGCCGGAGGCCGACTTCCCCCGGATGCTCAAACTGACCCAGGAGCTGTTCGGCAGCGACGACTCGGAATTCAA GCGCGGCAGCTCCAACGAGGATCAGCTGCCGGCGCTGCTGGACATGTTCGGCTACTTCAACGGCGTCACCGCCGCGCGCC GCGAGCATCCGACCGAGGATCTCGCGTCGGCGATCGCCAACGCCCGGGTTGACGGCGAACCGCTCTCGGACATCGACACC GTCTCCTACTACCTGATCGTCGCCACCGCCGGCCACGACACCACCAGCGCCACCATCTCCGGTGGCCTGCAGGCACTCAT CGAGAACCCCGACCAGCTGCAGCGGCTGCGCGACAACCTCGACCTGATGCCGCTGGCCACCGAGGAGATGATCCGCTGGG TCACCCCGGTCAAGGAGTTCATGCGCACCGCTGCCAAAGACACCGTGGTGCGTGGAGTGCCCATCGCCGCGGGCGAATCC GTGCTGCTGTCCTACGTCTCGGCGAACCGCGACGAGGACGTGTTCGACGAGCCGTTCCGCTTCGACGTCGGGCGCGACCC CAACAAGCATCTGGCCTTCGGCTACGGCGTGCACTTCTGCATGGGTGCGGCGCTGGCCCGCATGGAGGTCAACAGTTTCT TCACCGAGCTGCTGCCCCGGCTGAAATCCATTGAGCTGACCGGTGATCCGGAGCTGGTGGCCACCACCTTCGTCGGCGGC CTCAAGCACCTGCCGGTGCGGTATTCGCTGGCGTGA
Upstream 100 bases:
>100_bases GTCACATACTGGATTGCTTACTGTAAAGTTACCCGCATGCCTGACCCCGGCCGTCTCGAGGTCGGCGGCACCGAGCATCC CGGATCGAGGAGTTGCACCA
Downstream 100 bases:
>100_bases GTCGGGGTCAGGCCGCCACCTCTGCGTGATCGCTACACTCCCGGTGGAGGTCTGGCAATGACGCGCAGGACGATTGTCAT CACGGGCGCCAGCGACGGCA
Product: hypothetical protein
Products: NA
Alternate protein names: Cytochrome P450terp; Cytochrome P450 108 [H]
Number of amino acids: Translated: 411; Mature: 410
Protein sequence:
>411_residues MSTTTMDEAAKLLADPMAYTDEQRLHAALTHLRANAPVSWVEVPNYKPFWAITKHADVMDIERENMLFTNWPRPVLTTAE GDEMQAAAGVRTLIHMDDPQHRVVRAIGSDWFRPKAMRALKVRVDELAKIYVDKMLAAGPECDFVQEVAVNYPLYVIMSL LGLPEADFPRMLKLTQELFGSDDSEFKRGSSNEDQLPALLDMFGYFNGVTAARREHPTEDLASAIANARVDGEPLSDIDT VSYYLIVATAGHDTTSATISGGLQALIENPDQLQRLRDNLDLMPLATEEMIRWVTPVKEFMRTAAKDTVVRGVPIAAGES VLLSYVSANRDEDVFDEPFRFDVGRDPNKHLAFGYGVHFCMGAALARMEVNSFFTELLPRLKSIELTGDPELVATTFVGG LKHLPVRYSLA
Sequences:
>Translated_411_residues MSTTTMDEAAKLLADPMAYTDEQRLHAALTHLRANAPVSWVEVPNYKPFWAITKHADVMDIERENMLFTNWPRPVLTTAE GDEMQAAAGVRTLIHMDDPQHRVVRAIGSDWFRPKAMRALKVRVDELAKIYVDKMLAAGPECDFVQEVAVNYPLYVIMSL LGLPEADFPRMLKLTQELFGSDDSEFKRGSSNEDQLPALLDMFGYFNGVTAARREHPTEDLASAIANARVDGEPLSDIDT VSYYLIVATAGHDTTSATISGGLQALIENPDQLQRLRDNLDLMPLATEEMIRWVTPVKEFMRTAAKDTVVRGVPIAAGES VLLSYVSANRDEDVFDEPFRFDVGRDPNKHLAFGYGVHFCMGAALARMEVNSFFTELLPRLKSIELTGDPELVATTFVGG LKHLPVRYSLA >Mature_410_residues STTTMDEAAKLLADPMAYTDEQRLHAALTHLRANAPVSWVEVPNYKPFWAITKHADVMDIERENMLFTNWPRPVLTTAEG DEMQAAAGVRTLIHMDDPQHRVVRAIGSDWFRPKAMRALKVRVDELAKIYVDKMLAAGPECDFVQEVAVNYPLYVIMSLL GLPEADFPRMLKLTQELFGSDDSEFKRGSSNEDQLPALLDMFGYFNGVTAARREHPTEDLASAIANARVDGEPLSDIDTV SYYLIVATAGHDTTSATISGGLQALIENPDQLQRLRDNLDLMPLATEEMIRWVTPVKEFMRTAAKDTVVRGVPIAAGESV LLSYVSANRDEDVFDEPFRFDVGRDPNKHLAFGYGVHFCMGAALARMEVNSFFTELLPRLKSIELTGDPELVATTFVGGL KHLPVRYSLA
Specific function: Catalyzes the hydroxylation of alpha-terpineol [H]
COG id: COG2124
COG function: function code Q; Cytochrome P450
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cytochrome P450 family [H]
Homologues:
Organism=Homo sapiens, GI68509921, Length=209, Percent_Identity=28.7081339712919, Blast_Score=67, Evalue=3e-11, Organism=Homo sapiens, GI40805836, Length=209, Percent_Identity=28.7081339712919, Blast_Score=67, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001128 - InterPro: IPR002397 - InterPro: IPR017972 [H]
Pfam domain/function: PF00067 p450 [H]
EC number: NA
Molecular weight: Translated: 45781; Mature: 45650
Theoretical pI: Translated: 4.70; Mature: 4.70
Prosite motif: PS00086 CYTOCHROME_P450
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTTTMDEAAKLLADPMAYTDEQRLHAALTHLRANAPVSWVEVPNYKPFWAITKHADVMD CCCCCHHHHHHHHHCHHHCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCEEEECCCCCEE IERENMLFTNWPRPVLTTAEGDEMQAAAGVRTLIHMDDPQHRVVRAIGSDWFRPKAMRAL CCCCCEEEECCCCCEEECCCCCHHHHHHHHHHEEECCCHHHHHHHHHCCCCCCHHHHHHH KVRVDELAKIYVDKMLAAGPECDFVQEVAVNYPLYVIMSLLGLPEADFPRMLKLTQELFG HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHHHC SDDSEFKRGSSNEDQLPALLDMFGYFNGVTAARREHPTEDLASAIANARVDGEPLSDIDT CCCHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHCCCCCCCCCCHHH VSYYLIVATAGHDTTSATISGGLQALIENPDQLQRLRDNLDLMPLATEEMIRWVTPVKEF EEEEEEEEECCCCCCHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH MRTAAKDTVVRGVPIAAGESVLLSYVSANRDEDVFDEPFRFDVGRDPNKHLAFGYGVHFC HHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCCEECCCCCCCCCEEEHHHHHHH MGAALARMEVNSFFTELLPRLKSIELTGDPELVATTFVGGLKHLPVRYSLA HHHHHHHHHHHHHHHHHHHHHHCEEECCCCHHHHHHHHHHHHHCCEEEECC >Mature Secondary Structure STTTMDEAAKLLADPMAYTDEQRLHAALTHLRANAPVSWVEVPNYKPFWAITKHADVMD CCCCHHHHHHHHHCHHHCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCEEEECCCCCEE IERENMLFTNWPRPVLTTAEGDEMQAAAGVRTLIHMDDPQHRVVRAIGSDWFRPKAMRAL CCCCCEEEECCCCCEEECCCCCHHHHHHHHHHEEECCCHHHHHHHHHCCCCCCHHHHHHH KVRVDELAKIYVDKMLAAGPECDFVQEVAVNYPLYVIMSLLGLPEADFPRMLKLTQELFG HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHHHC SDDSEFKRGSSNEDQLPALLDMFGYFNGVTAARREHPTEDLASAIANARVDGEPLSDIDT CCCHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHCCCCCCCCCCHHH VSYYLIVATAGHDTTSATISGGLQALIENPDQLQRLRDNLDLMPLATEEMIRWVTPVKEF EEEEEEEEECCCCCCHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH MRTAAKDTVVRGVPIAAGESVLLSYVSANRDEDVFDEPFRFDVGRDPNKHLAFGYGVHFC HHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCCEECCCCCCCCCEEEHHHHHHH MGAALARMEVNSFFTELLPRLKSIELTGDPELVATTFVGGLKHLPVRYSLA HHHHHHHHHHHHHHHHHHHHHHCEEECCCCHHHHHHHHHHHHHCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1629218; 8120894 [H]