| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41408439
Identifier: 41408439
GI number: 41408439
Start: 2631397
End: 2631822
Strand: Reverse
Name: 41408439
Synonym: MAP2341c
Alternate gene names: NA
Gene position: 2631822-2631397 (Counterclockwise)
Preceding gene: 41408440
Following gene: 41408438
Centisome position: 54.49
GC content: 66.43
Gene sequence:
>426_bases ATGTCCCTGACCTATCAACAAGAACAGTTCCTTCAGGCCGCGACGAGCCGAGCCGCCATCCTGAACCTGAACGCCCGGCA CAATCGGGCCTATTCGGACGGCGACCGCGATGGCTGGATCGCCACCTTCCGCCACTCCGGCGCCAGCTACACCCGCGACG GAGAGGCGTTCACCGATCTGCGCGCCGCGTTCGACGGCGGCGACGACCAGCGCCTGGTCACCGTCGATCACGAGATCCAC GTCGACGGGGTGACCGCGACGCAGCAGTGCGTCGCCGTATTGTTCGCGGCCATGTTCGGTGACGCGGCGCTGCGGGCCAC CGGGGTGTTCCGCGACGAGCTGATCTACGAGCGGGGCGGCTGGTATTTCACTTCCCGTGCCTTGCAGTGGGATTCGGTAC CCAGTCGGCACCCGCTCGTCATGTGA
Upstream 100 bases:
>100_bases TGGGATCGGGAGAAGCATGGCTATGTCGTCCGGCGCTAAGTAGAGTTAGCGTCAACCGCGCAGTTCGCCGTCGGGTTTCC CGGAGAGGGTTCACAAGCAG
Downstream 100 bases:
>100_bases GCGGCGTCGGCACGTGGATCAGGACTTCAGTCGGCGGCTGGCCTTCGGAACCTATGAAGACGCACTGCGCATGGTCGGCG CGAAGGGCGAACCCCGCACC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 141; Mature: 140
Protein sequence:
>141_residues MSLTYQQEQFLQAATSRAAILNLNARHNRAYSDGDRDGWIATFRHSGASYTRDGEAFTDLRAAFDGGDDQRLVTVDHEIH VDGVTATQQCVAVLFAAMFGDAALRATGVFRDELIYERGGWYFTSRALQWDSVPSRHPLVM
Sequences:
>Translated_141_residues MSLTYQQEQFLQAATSRAAILNLNARHNRAYSDGDRDGWIATFRHSGASYTRDGEAFTDLRAAFDGGDDQRLVTVDHEIH VDGVTATQQCVAVLFAAMFGDAALRATGVFRDELIYERGGWYFTSRALQWDSVPSRHPLVM >Mature_140_residues SLTYQQEQFLQAATSRAAILNLNARHNRAYSDGDRDGWIATFRHSGASYTRDGEAFTDLRAAFDGGDDQRLVTVDHEIHV DGVTATQQCVAVLFAAMFGDAALRATGVFRDELIYERGGWYFTSRALQWDSVPSRHPLVM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15762; Mature: 15630
Theoretical pI: Translated: 5.53; Mature: 5.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLTYQQEQFLQAATSRAAILNLNARHNRAYSDGDRDGWIATFRHSGASYTRDGEAFTDL CCCCCHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHH RAAFDGGDDQRLVTVDHEIHVDGVTATQQCVAVLFAAMFGDAALRATGVFRDELIYERGG HHHHCCCCCCEEEEECCEEEECCCCHHHHHHHHHHHHHHCCHHHHHHCCHHHHHHHHCCC WYFTSRALQWDSVPSRHPLVM EEEECCCEECCCCCCCCCCCC >Mature Secondary Structure SLTYQQEQFLQAATSRAAILNLNARHNRAYSDGDRDGWIATFRHSGASYTRDGEAFTDL CCCCHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHH RAAFDGGDDQRLVTVDHEIHVDGVTATQQCVAVLFAAMFGDAALRATGVFRDELIYERGG HHHHCCCCCCEEEEECCEEEECCCCHHHHHHHHHHHHHHCCHHHHHHCCHHHHHHHHCCC WYFTSRALQWDSVPSRHPLVM EEEECCCEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA