| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41408438
Identifier: 41408438
GI number: 41408438
Start: 2630853
End: 2631383
Strand: Reverse
Name: 41408438
Synonym: MAP2340c
Alternate gene names: NA
Gene position: 2631383-2630853 (Counterclockwise)
Preceding gene: 41408439
Following gene: 41408437
Centisome position: 54.48
GC content: 69.68
Gene sequence:
>531_bases GTGGATCAGGACTTCAGTCGGCGGCTGGCCTTCGGAACCTATGAAGACGCACTGCGCATGGTCGGCGCGAAGGGCGAACC CCGCACCGCGGGCACGGCGGTCAGCGCCGCGCGCATCCAGCTGTTCGCCGCGATGGTCCGCGACGGCAACCGCTCGTACT GGGATTCCGCGTTCGCCCAACACCATTGGGGAGGGCTGCTGGCGCCGCCGGCGCTGTTGATGGGCTGGCTGATAGCACCG CCCTGGCAGCCCGACGGCCGGCCATCCGCCTCCTTGATCGCCCTGCGGGTGCCGCTGCCGGGCACCACGTTCATCAACGC GGCCAACGAGGTCGAATTCCCCCACCCCATCGTCGAGGGCGACGTGCTGACCGTGGTCGACGAGCTGGTGTCGGTGTCAC CGGAGAAGCGGACCCGGCTGGGCGTCGGCCACTTCGTCGAGACGCTGGAGACCTATCGGCGCCAGGACGGCACGGTGGTC GCCACCTCGCGGAACACGTTGTTCCGCTTCACCCCGGGGCCGTCGTCGTGA
Upstream 100 bases:
>100_bases CTGATCTACGAGCGGGGCGGCTGGTATTTCACTTCCCGTGCCTTGCAGTGGGATTCGGTACCCAGTCGGCACCCGCTCGT CATGTGAGCGGCGTCGGCAC
Downstream 100 bases:
>100_bases CCGGTGCGGGCGTGGACTGGAGCCGGCTCAGCGTCCCCGCCGAGCTGCCGGAAGTGGTCGACCACATCAGCTACCAGCGG GTGGTGGAAAACGCCGGAGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 176; Mature: 176
Protein sequence:
>176_residues MDQDFSRRLAFGTYEDALRMVGAKGEPRTAGTAVSAARIQLFAAMVRDGNRSYWDSAFAQHHWGGLLAPPALLMGWLIAP PWQPDGRPSASLIALRVPLPGTTFINAANEVEFPHPIVEGDVLTVVDELVSVSPEKRTRLGVGHFVETLETYRRQDGTVV ATSRNTLFRFTPGPSS
Sequences:
>Translated_176_residues MDQDFSRRLAFGTYEDALRMVGAKGEPRTAGTAVSAARIQLFAAMVRDGNRSYWDSAFAQHHWGGLLAPPALLMGWLIAP PWQPDGRPSASLIALRVPLPGTTFINAANEVEFPHPIVEGDVLTVVDELVSVSPEKRTRLGVGHFVETLETYRRQDGTVV ATSRNTLFRFTPGPSS >Mature_176_residues MDQDFSRRLAFGTYEDALRMVGAKGEPRTAGTAVSAARIQLFAAMVRDGNRSYWDSAFAQHHWGGLLAPPALLMGWLIAP PWQPDGRPSASLIALRVPLPGTTFINAANEVEFPHPIVEGDVLTVVDELVSVSPEKRTRLGVGHFVETLETYRRQDGTVV ATSRNTLFRFTPGPSS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19246; Mature: 19246
Theoretical pI: Translated: 6.97; Mature: 6.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDQDFSRRLAFGTYEDALRMVGAKGEPRTAGTAVSAARIQLFAAMVRDGNRSYWDSAFAQ CCCCHHHHHCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHH HHWGGLLAPPALLMGWLIAPPWQPDGRPSASLIALRVPLPGTTFINAANEVEFPHPIVEG HHCCCCCCCHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCEECCCCCCCCCCCCCCC DVLTVVDELVSVSPEKRTRLGVGHFVETLETYRRQDGTVVATSRNTLFRFTPGPSS HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCEEEEECCCCCC >Mature Secondary Structure MDQDFSRRLAFGTYEDALRMVGAKGEPRTAGTAVSAARIQLFAAMVRDGNRSYWDSAFAQ CCCCHHHHHCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHH HHWGGLLAPPALLMGWLIAPPWQPDGRPSASLIALRVPLPGTTFINAANEVEFPHPIVEG HHCCCCCCCHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCEECCCCCCCCCCCCCCC DVLTVVDELVSVSPEKRTRLGVGHFVETLETYRRQDGTVVATSRNTLFRFTPGPSS HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA