Definition Mycobacterium avium subsp. paratuberculosis K-10, complete genome.
Accession NC_002944
Length 4,829,781

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The map label for this gene is yxiO [H]

Identifier: 41408415

GI number: 41408415

Start: 2598251

End: 2599600

Strand: Reverse

Name: yxiO [H]

Synonym: MAP2317c

Alternate gene names: 41408415

Gene position: 2599600-2598251 (Counterclockwise)

Preceding gene: 41408417

Following gene: 41408412

Centisome position: 53.82

GC content: 71.11

Gene sequence:

>1350_bases
TTGCCGGGCATGAGCCAGCCGGAGTCGCGTGCCGCCGCCCCCGTGCGATCGCGGGTGGTGGCGTGGGCGCTCTGGGATTG
CGGCTCGACCGGGCTGAACGCGATCGTGGCCACCTTCGTCTTCGCCGTCTATTTGACCAGCAGTGTTGGCGTGGGCATCG
GCGGCAGCACCACGCCGGCGAGTTGGCTGGGCCGGGCGGCGGCCATCGCCGGGTTGACGGTCGCGCTGCTGGCGCCCGCC
GTCGGCGTGTGGGTGGAGTCGCCGCATCGGCGGCGGGTGGCGCTGAGCGTGTTGACCGCGTTGGCGGTGACGTTGACCGG
CTCGATGTTCTTCATCCGCGATCGGCCCGGCTATCTGTGGGCGGGCCTGGTGCTGCTGGGGGCGACGGCGGCTTGCGGCG
ATCTGGCCAGCGTCCCGTACAACGCCATGCTGCGCCAGCTCTCGACGCCGCGCACCGCCGGTCGGATCTCCGGGTTCGGC
TGGGCGGCGGGCTATGTCGGCAGCGTCCTGCTGTTGCTGGTGATCTACACCGGCTTCATCGCCGGATCGGGTTCGGGCCC
GGATGCCACGCGCGGGCTGCTGCGAGTTCCGTTGCGCGACGGGCTTTATGTCCGAGAGGCGATGCTGGTGGCCGCGGCCT
GGTTGGCGCTGTTCGCGCTGCCGCTGCTGTTCGTCGCGCACCGGCTCACCGAGTCCGCCGAGGGGTATCGGCCGACGAGC
ATGCTGGGCGGATATCGCAAGCTGTGGACCGAGGTCCGCGAGGAATGGCGGCGCGATCGCAACCTGGTGTACTTCCTGTT
CGCCAGCGCGCTGTTCCGGGACGGACTGGCGGCGATCTTCGCCTTCGGCGCGGTGCTCGGCGTCAACGTCTACGGCATCT
CCCAGGCCGACGTGCTGGTGTTCGGGGTGGCGGCCAGCGTGGTGGCCGCCGTGGGTGCGGTGCTGGGCGGTTTCGTCGAC
CACCGGGTCGGATCCAAGCCCGTCATCGTCGCGTCCCTGCTGGCCATCGTCGTGCTGGGGCTGACCCTGATGGCGTTGTC
CGGGCCGGTGGCGTTCTGGGCCTGTGGCCTGCTGCTGTGCATGTTCATCGGGCCGTCGCAATCGTCGTCGCGCGCCCTGC
TGCTGCAGATGGCCAAGCACGGCAGAGAAGGCGTCGCGTTCGGCCTCTACACCATGACCGGGCGGGCGGTGTCGTTCGTG
GCGCCGTGGCTGTTCTCGGTGTTCGTCGACGCGTTCGGGGCGGTGCGCGCCGGCCTCGGCGGGATCTCGCTGGTGCTGAC
CGCCGGGCTGCTGGCCATGCTCGCGGTGCGGGTCCCGCGCCGCGCCCCCGTCGCCGTCGAAGCGGCATGA

Upstream 100 bases:

>100_bases
CAACCGCGCGCGCCTCGGGGCTGGGAGCGGGGATCGGCATGCGCCAATCGTAGACAGCGCGCGAACGGCGATCGGCAGGC
GATCGCCGGCGCCGATAGAG

Downstream 100 bases:

>100_bases
CGCCGCCACGGCGACCTGCCGCCGCCGCGCCGAGTGTGGGGGATACGTCCGCCCGCGCGCGGGCAACCGTGCATAGGCCC
CACGGTCGGCGGGCCGCGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 449; Mature: 448

Protein sequence:

>449_residues
MPGMSQPESRAAAPVRSRVVAWALWDCGSTGLNAIVATFVFAVYLTSSVGVGIGGSTTPASWLGRAAAIAGLTVALLAPA
VGVWVESPHRRRVALSVLTALAVTLTGSMFFIRDRPGYLWAGLVLLGATAACGDLASVPYNAMLRQLSTPRTAGRISGFG
WAAGYVGSVLLLLVIYTGFIAGSGSGPDATRGLLRVPLRDGLYVREAMLVAAAWLALFALPLLFVAHRLTESAEGYRPTS
MLGGYRKLWTEVREEWRRDRNLVYFLFASALFRDGLAAIFAFGAVLGVNVYGISQADVLVFGVAASVVAAVGAVLGGFVD
HRVGSKPVIVASLLAIVVLGLTLMALSGPVAFWACGLLLCMFIGPSQSSSRALLLQMAKHGREGVAFGLYTMTGRAVSFV
APWLFSVFVDAFGAVRAGLGGISLVLTAGLLAMLAVRVPRRAPVAVEAA

Sequences:

>Translated_449_residues
MPGMSQPESRAAAPVRSRVVAWALWDCGSTGLNAIVATFVFAVYLTSSVGVGIGGSTTPASWLGRAAAIAGLTVALLAPA
VGVWVESPHRRRVALSVLTALAVTLTGSMFFIRDRPGYLWAGLVLLGATAACGDLASVPYNAMLRQLSTPRTAGRISGFG
WAAGYVGSVLLLLVIYTGFIAGSGSGPDATRGLLRVPLRDGLYVREAMLVAAAWLALFALPLLFVAHRLTESAEGYRPTS
MLGGYRKLWTEVREEWRRDRNLVYFLFASALFRDGLAAIFAFGAVLGVNVYGISQADVLVFGVAASVVAAVGAVLGGFVD
HRVGSKPVIVASLLAIVVLGLTLMALSGPVAFWACGLLLCMFIGPSQSSSRALLLQMAKHGREGVAFGLYTMTGRAVSFV
APWLFSVFVDAFGAVRAGLGGISLVLTAGLLAMLAVRVPRRAPVAVEAA
>Mature_448_residues
PGMSQPESRAAAPVRSRVVAWALWDCGSTGLNAIVATFVFAVYLTSSVGVGIGGSTTPASWLGRAAAIAGLTVALLAPAV
GVWVESPHRRRVALSVLTALAVTLTGSMFFIRDRPGYLWAGLVLLGATAACGDLASVPYNAMLRQLSTPRTAGRISGFGW
AAGYVGSVLLLLVIYTGFIAGSGSGPDATRGLLRVPLRDGLYVREAMLVAAAWLALFALPLLFVAHRLTESAEGYRPTSM
LGGYRKLWTEVREEWRRDRNLVYFLFASALFRDGLAAIFAFGAVLGVNVYGISQADVLVFGVAASVVAAVGAVLGGFVDH
RVGSKPVIVASLLAIVVLGLTLMALSGPVAFWACGLLLCMFIGPSQSSSRALLLQMAKHGREGVAFGLYTMTGRAVSFVA
PWLFSVFVDAFGAVRAGLGGISLVLTAGLLAMLAVRVPRRAPVAVEAA

Specific function: Unknown

COG id: COG2270

COG function: function code R; Permeases of the major facilitator superfamily

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR016196 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46906; Mature: 46775

Theoretical pI: Translated: 10.62; Mature: 10.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPGMSQPESRAAAPVRSRVVAWALWDCGSTGLNAIVATFVFAVYLTSSVGVGIGGSTTPA
CCCCCCCHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHH
SWLGRAAAIAGLTVALLAPAVGVWVESPHRRRVALSVLTALAVTLTGSMFFIRDRPGYLW
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCHHH
AGLVLLGATAACGDLASVPYNAMLRQLSTPRTAGRISGFGWAAGYVGSVLLLLVIYTGFI
HHHHHHHCHHHHCHHHCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
AGSGSGPDATRGLLRVPLRDGLYVREAMLVAAAWLALFALPLLFVAHRLTESAEGYRPTS
CCCCCCCHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
MLGGYRKLWTEVREEWRRDRNLVYFLFASALFRDGLAAIFAFGAVLGVNVYGISQADVLV
HHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCEEECCCCHHHHH
FGVAASVVAAVGAVLGGFVDHRVGSKPVIVASLLAIVVLGLTLMALSGPVAFWACGLLLC
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
MFIGPSQSSSRALLLQMAKHGREGVAFGLYTMTGRAVSFVAPWLFSVFVDAFGAVRAGLG
HHCCCCCCCCHHHHHHHHHCCCCCCEEEHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCC
GISLVLTAGLLAMLAVRVPRRAPVAVEAA
HHHHHHHHHHHHHHHHHCCCCCCEEEECC
>Mature Secondary Structure 
PGMSQPESRAAAPVRSRVVAWALWDCGSTGLNAIVATFVFAVYLTSSVGVGIGGSTTPA
CCCCCCHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHH
SWLGRAAAIAGLTVALLAPAVGVWVESPHRRRVALSVLTALAVTLTGSMFFIRDRPGYLW
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCHHH
AGLVLLGATAACGDLASVPYNAMLRQLSTPRTAGRISGFGWAAGYVGSVLLLLVIYTGFI
HHHHHHHCHHHHCHHHCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
AGSGSGPDATRGLLRVPLRDGLYVREAMLVAAAWLALFALPLLFVAHRLTESAEGYRPTS
CCCCCCCHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
MLGGYRKLWTEVREEWRRDRNLVYFLFASALFRDGLAAIFAFGAVLGVNVYGISQADVLV
HHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCEEECCCCHHHHH
FGVAASVVAAVGAVLGGFVDHRVGSKPVIVASLLAIVVLGLTLMALSGPVAFWACGLLLC
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
MFIGPSQSSSRALLLQMAKHGREGVAFGLYTMTGRAVSFVAPWLFSVFVDAFGAVRAGLG
HHCCCCCCCCHHHHHHHHHCCCCCCEEEHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCC
GISLVLTAGLLAMLAVRVPRRAPVAVEAA
HHHHHHHHHHHHHHHHHCCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8969509; 9384377 [H]