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The map label for this gene is 41408395

Identifier: 41408395

GI number: 41408395

Start: 2572486

End: 2574555

Strand: Reverse

Name: 41408395

Synonym: MAP2297c

Alternate gene names: NA

Gene position: 2574555-2572486 (Counterclockwise)

Preceding gene: 41408396

Following gene: 41408394

Centisome position: 53.31

GC content: 73.29

Gene sequence:

>2070_bases
ATGACCGTCGCCCCGCCGGCCGGCACCGCCTCGACCGAGGCGGTCCCGCAGCACCGCACGCTGGTGTGGCCGGTGCTGGC
CGGCGTCGCCGTGCTGGCCGGCTGCACGGCCGCAGGGATCGGCACGCTGTCGCTGGCGAGCGCGTTGACCGCGACCGGGC
TGCCCGACCCGGGCCCGGTGACCACCGTGGGATTGCCCTTCCTGCGCGCGGCCGGCGAGATCGCCGCGGTGCTCGCGGTC
GGCTCCTTCCTGTTCGCCGCCTTCCTGGTGCCGCCGCAACCCAGCGGTGTGCTCGACGCCGACGGCTACCGGGCGCTGCG
ACTGGGCACCGTCGCGTCCGGGGTGTGGGCGGTGTGCGCCGCCCTGCTGGTCCCGCTCACCCTGTCGGACGTGTCCGGTC
ACCCCGTCGCCGACCTGCGCCCCGCCCAGATGTGGTCGCTGGCCGGTCTCATCACCACCGCCTCGGCCTGGCGCTGGACG
GCCATCCTGGCCGCGGCCATCACGCTGGCCAGCCTGCCGGTGCTGCGCTGGTCGTGGGCCCCGGTGCTGCTGGCCGCGTC
GCTGACGACGCTGATCCCGCTCGGCCTGACCGGGCATTCGTCCGCCGGCGGCTCCCACGACCTGGCCACCAACGGCCTGC
TGATCCACCTGGTCGCCGCCGCCCTGTGGGCCGGCGGCTTGCTGGCCCTGCTGGCCTATGCGCTGCGCGGCGGTCAGGGC
GGCGATCACCTGGGCCTGGCGACGCGGCGCTTCTCGGCCATCGCGCTGTGGTGTTGGGTCGCGATGGCGCTGAGCGGACT
GGTCAACGCCGCGGTGCGGGTCCAGCCGAGCGACCTGCTGGCCACCGGCTACGGCCGGCTGGTGCTGGCCAAAGCCGCGG
CGCTGTGCCTGCTGGGCGGCGTGGGTTGGCGTCAGCGGCGGGTGAATGTGGCGGCGCTGCAAGCGGTTTCGACTCTCGCG
CGGGCGCGCCGCGCGCTGCTGCGGCTGACCCTGATCGAGGCCGCGCTGTTCGGCCTGACCTTCGGCATCGCCGTCGGGCT
GGGCCGCACCGCGCCCCCATCGCCGCCGGCCCGGTTGCCCTCGATCGCCGAGGCCGAGATCGGCTACGACTTCGACGGAC
CGCCGACGCTGACGCGCATCCTGTTCGACTGGCGCTTCGACCTGATCTTCGGCACCGCCGCCATCGTCCTGGCCGGGCTG
TATGTCGCCGGTGTGGTGCGGCTGCGCCGCCGCGGCGACCGCTGGCCACCGGGCCGCACGTCGTCCTGGCTGCTCGGCTG
CCTGGTGTTGCTGTTCGTCACGTCGTCGGGGGTCGGCCGCTACATGCCGGCCATGTTCAGCATGCACATGGTGGTGCACA
TGTGCCTGTCCATGCTGGTGCCGATCCTGCTGGCGCTGGGCGCCCCGGTCACCCTGGCGTTACGCGCGCTGCCCGCCGCC
GGCCGCGGCGATCCGCCGGGACCGCGCGAATGGCTGTTGGCCGCGCTGCACAGCCGGTTCTCCCGGTTGCTCACCAACCC
CGTGGTGGCCACCGTGCTGTTCGTGGCCGGTTTCTACGGGCTGTATCTGTCCAACCTGTTCGACACCACCGCGAGCAGTC
ATGCCGGGCACCTGCTGATGAACCTGCACTTCCTGCTCAGCGGCTACCTCTTCTACTGGGTGGTGATCGGGGTGGACCCG
ACGCCGCGGCCGATCCCGCCGCTGGCCAAGCTGGCCGTCGTGTTCGCCTCGCTGCCGCTGCACGCCTTCTTCGGGGTGGT
GCTGATGGGCACCCGGAAGGTGCTGGGCGCCGACTACTACCGCTCGCTGGGCTTCAGCTGGCACACCGATCTGCTCGGCG
ATCAACGGCTGGGCGGCGGCATCGCCTGGTCGGCGGGCGAATTCCCGCTGGTGATCGTCATGCTGGCGCTGCTGGTGCAG
TGGGCGCGCAGCGACCGGCGCACCGCCAAGCGGCTGGACCGGGCCGCCGACCGCGACGACGACGCCGAACTGGCGGCCTA
CAACGCGATGCTCGCCCAGCTCGCCGGGCGGGACAAGCCGGGCGAAGGGTCCGCGACCGGTCAGGCGTAG

Upstream 100 bases:

>100_bases
GTCGCGCGCGAGCAGTTCGTGGCCCGGGAGGCCAAGGCGCGCCGGGAGAGCCTGGACAGTCGACCGGGATAGCCGACCGC
CCCGCCAATACCCTGGGGGG

Downstream 100 bases:

>100_bases
TGATACCGGACCTGCAGGATCTGCAGGTCGTGAACTCGCCGATCCATCCACAGTCGCCGTTCCTTCCACAGGTTCGCGGC
CCGGGACGCGTCGGGCCCTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 689; Mature: 688

Protein sequence:

>689_residues
MTVAPPAGTASTEAVPQHRTLVWPVLAGVAVLAGCTAAGIGTLSLASALTATGLPDPGPVTTVGLPFLRAAGEIAAVLAV
GSFLFAAFLVPPQPSGVLDADGYRALRLGTVASGVWAVCAALLVPLTLSDVSGHPVADLRPAQMWSLAGLITTASAWRWT
AILAAAITLASLPVLRWSWAPVLLAASLTTLIPLGLTGHSSAGGSHDLATNGLLIHLVAAALWAGGLLALLAYALRGGQG
GDHLGLATRRFSAIALWCWVAMALSGLVNAAVRVQPSDLLATGYGRLVLAKAAALCLLGGVGWRQRRVNVAALQAVSTLA
RARRALLRLTLIEAALFGLTFGIAVGLGRTAPPSPPARLPSIAEAEIGYDFDGPPTLTRILFDWRFDLIFGTAAIVLAGL
YVAGVVRLRRRGDRWPPGRTSSWLLGCLVLLFVTSSGVGRYMPAMFSMHMVVHMCLSMLVPILLALGAPVTLALRALPAA
GRGDPPGPREWLLAALHSRFSRLLTNPVVATVLFVAGFYGLYLSNLFDTTASSHAGHLLMNLHFLLSGYLFYWVVIGVDP
TPRPIPPLAKLAVVFASLPLHAFFGVVLMGTRKVLGADYYRSLGFSWHTDLLGDQRLGGGIAWSAGEFPLVIVMLALLVQ
WARSDRRTAKRLDRAADRDDDAELAAYNAMLAQLAGRDKPGEGSATGQA

Sequences:

>Translated_689_residues
MTVAPPAGTASTEAVPQHRTLVWPVLAGVAVLAGCTAAGIGTLSLASALTATGLPDPGPVTTVGLPFLRAAGEIAAVLAV
GSFLFAAFLVPPQPSGVLDADGYRALRLGTVASGVWAVCAALLVPLTLSDVSGHPVADLRPAQMWSLAGLITTASAWRWT
AILAAAITLASLPVLRWSWAPVLLAASLTTLIPLGLTGHSSAGGSHDLATNGLLIHLVAAALWAGGLLALLAYALRGGQG
GDHLGLATRRFSAIALWCWVAMALSGLVNAAVRVQPSDLLATGYGRLVLAKAAALCLLGGVGWRQRRVNVAALQAVSTLA
RARRALLRLTLIEAALFGLTFGIAVGLGRTAPPSPPARLPSIAEAEIGYDFDGPPTLTRILFDWRFDLIFGTAAIVLAGL
YVAGVVRLRRRGDRWPPGRTSSWLLGCLVLLFVTSSGVGRYMPAMFSMHMVVHMCLSMLVPILLALGAPVTLALRALPAA
GRGDPPGPREWLLAALHSRFSRLLTNPVVATVLFVAGFYGLYLSNLFDTTASSHAGHLLMNLHFLLSGYLFYWVVIGVDP
TPRPIPPLAKLAVVFASLPLHAFFGVVLMGTRKVLGADYYRSLGFSWHTDLLGDQRLGGGIAWSAGEFPLVIVMLALLVQ
WARSDRRTAKRLDRAADRDDDAELAAYNAMLAQLAGRDKPGEGSATGQA
>Mature_688_residues
TVAPPAGTASTEAVPQHRTLVWPVLAGVAVLAGCTAAGIGTLSLASALTATGLPDPGPVTTVGLPFLRAAGEIAAVLAVG
SFLFAAFLVPPQPSGVLDADGYRALRLGTVASGVWAVCAALLVPLTLSDVSGHPVADLRPAQMWSLAGLITTASAWRWTA
ILAAAITLASLPVLRWSWAPVLLAASLTTLIPLGLTGHSSAGGSHDLATNGLLIHLVAAALWAGGLLALLAYALRGGQGG
DHLGLATRRFSAIALWCWVAMALSGLVNAAVRVQPSDLLATGYGRLVLAKAAALCLLGGVGWRQRRVNVAALQAVSTLAR
ARRALLRLTLIEAALFGLTFGIAVGLGRTAPPSPPARLPSIAEAEIGYDFDGPPTLTRILFDWRFDLIFGTAAIVLAGLY
VAGVVRLRRRGDRWPPGRTSSWLLGCLVLLFVTSSGVGRYMPAMFSMHMVVHMCLSMLVPILLALGAPVTLALRALPAAG
RGDPPGPREWLLAALHSRFSRLLTNPVVATVLFVAGFYGLYLSNLFDTTASSHAGHLLMNLHFLLSGYLFYWVVIGVDPT
PRPIPPLAKLAVVFASLPLHAFFGVVLMGTRKVLGADYYRSLGFSWHTDLLGDQRLGGGIAWSAGEFPLVIVMLALLVQW
ARSDRRTAKRLDRAADRDDDAELAAYNAMLAQLAGRDKPGEGSATGQA

Specific function: Unknown

COG id: COG3336

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.tuberculosis Rv0102 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008457
- InterPro:   IPR019108 [H]

Pfam domain/function: PF09678 Caa3_CtaG; PF05425 CopD [H]

EC number: NA

Molecular weight: Translated: 72229; Mature: 72097

Theoretical pI: Translated: 10.27; Mature: 10.27

Prosite motif: PS01155 ENDONUCLEASE_III_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVAPPAGTASTEAVPQHRTLVWPVLAGVAVLAGCTAAGIGTLSLASALTATGLPDPGPV
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCC
TTVGLPFLRAAGEIAAVLAVGSFLFAAFLVPPQPSGVLDADGYRALRLGTVASGVWAVCA
CHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHH
ALLVPLTLSDVSGHPVADLRPAQMWSLAGLITTASAWRWTAILAAAITLASLPVLRWSWA
HHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHH
PVLLAASLTTLIPLGLTGHSSAGGSHDLATNGLLIHLVAAALWAGGLLALLAYALRGGQG
HHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
GDHLGLATRRFSAIALWCWVAMALSGLVNAAVRVQPSDLLATGYGRLVLAKAAALCLLGG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCHHHHHHCCHHHHHHHHHHHHHHCC
VGWRQRRVNVAALQAVSTLARARRALLRLTLIEAALFGLTFGIAVGLGRTAPPSPPARLP
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
SIAEAEIGYDFDGPPTLTRILFDWRFDLIFGTAAIVLAGLYVAGVVRLRRRGDRWPPGRT
CCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
SSWLLGCLVLLFVTSSGVGRYMPAMFSMHMVVHMCLSMLVPILLALGAPVTLALRALPAA
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCC
GRGDPPGPREWLLAALHSRFSRLLTNPVVATVLFVAGFYGLYLSNLFDTTASSHAGHLLM
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
NLHFLLSGYLFYWVVIGVDPTPRPIPPLAKLAVVFASLPLHAFFGVVLMGTRKVLGADYY
HHHHHHHHHHHHHHEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RSLGFSWHTDLLGDQRLGGGIAWSAGEFPLVIVMLALLVQWARSDRRTAKRLDRAADRDD
HHCCCCCCHHCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
DAELAAYNAMLAQLAGRDKPGEGSATGQA
CHHHHHHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure 
TVAPPAGTASTEAVPQHRTLVWPVLAGVAVLAGCTAAGIGTLSLASALTATGLPDPGPV
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCC
TTVGLPFLRAAGEIAAVLAVGSFLFAAFLVPPQPSGVLDADGYRALRLGTVASGVWAVCA
CHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHH
ALLVPLTLSDVSGHPVADLRPAQMWSLAGLITTASAWRWTAILAAAITLASLPVLRWSWA
HHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHH
PVLLAASLTTLIPLGLTGHSSAGGSHDLATNGLLIHLVAAALWAGGLLALLAYALRGGQG
HHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
GDHLGLATRRFSAIALWCWVAMALSGLVNAAVRVQPSDLLATGYGRLVLAKAAALCLLGG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCHHHHHHCCHHHHHHHHHHHHHHCC
VGWRQRRVNVAALQAVSTLARARRALLRLTLIEAALFGLTFGIAVGLGRTAPPSPPARLP
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
SIAEAEIGYDFDGPPTLTRILFDWRFDLIFGTAAIVLAGLYVAGVVRLRRRGDRWPPGRT
CCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
SSWLLGCLVLLFVTSSGVGRYMPAMFSMHMVVHMCLSMLVPILLALGAPVTLALRALPAA
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCC
GRGDPPGPREWLLAALHSRFSRLLTNPVVATVLFVAGFYGLYLSNLFDTTASSHAGHLLM
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
NLHFLLSGYLFYWVVIGVDPTPRPIPPLAKLAVVFASLPLHAFFGVVLMGTRKVLGADYY
HHHHHHHHHHHHHHEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RSLGFSWHTDLLGDQRLGGGIAWSAGEFPLVIVMLALLVQWARSDRRTAKRLDRAADRDD
HHCCCCCCHHCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
DAELAAYNAMLAQLAGRDKPGEGSATGQA
CHHHHHHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7476188; 11234002 [H]