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The map label for this gene is yggB [C]

Identifier: 41408346

GI number: 41408346

Start: 2511621

End: 2512616

Strand: Reverse

Name: yggB [C]

Synonym: MAP2248c

Alternate gene names: 41408346

Gene position: 2512616-2511621 (Counterclockwise)

Preceding gene: 41408347

Following gene: 41408345

Centisome position: 52.02

GC content: 71.39

Gene sequence:

>996_bases
GTGCGGATCGGCGGGCTGTTCACCGCGCTGGGCATCACCTCGGTCGTCATCGGCCTGATGCTGCAGAACTCCGTCGGCCA
GATCGTCTCGGGCTTGTTCATGTTGTTCGAGCAGCCGTTCCGGATCGACGACTGGCTGGACACCGGGACCACCAGCGGGC
GCGTCGTCGAGGTGAACTGGCGTTCGGTGCACATCGACACCGGCGCCGGGATCCGCATCATGCCGAACTCGATGCTGGCG
ACCACGTCGTTCATCAACCTCAGCCGGCCGCCCGGACCGCACAAGGTGGCGATCGACACCACGTTCTCCACCGCCGACGC
GCCCGACCGGGTGTGCGCGACGCTGTCCCGGGTCGCCCGCGCGTTGCCGCAAGTCAAACCCGGCACCGTCGCCCGCACGG
TGCCCGTCGGCGCCGCCGGGTACCGCACCGTCATCTGGCTGGACTCACCCGCCGACGCCGGCGCCGCGAAGGCCACCTTC
CTGCGCTGGGCCTGGTACGCCGCCCGGCGCGAGGAGCTGCACCTCGACGGCGCCGACGACGATTTCTCCACGGTGCAACG
CGTGGAGCACGCGTTGGACACGGTCGTCGCGGCGGCCTTGCGGCTCAGCGCCGAGGAGCAGCGGTCGCTGCGGTCGGCGG
CCAGGATCGTGCGGTACGGCGCCGACGAGATCGTGGAGGACGCCGGTCAGGTGCCGTCGGCGATGACGTTTCTGGTGTCG
GGCCGGGTGCAGCTGACCGCGACGGCCGAGGACGGGACCGTCGTTCCCGTCAGCACCCTGGCCGAAGGCGAGTTCCTGGG
GCTGACCGCGCTGACCCGGCAACCCAACCTGGCCAGCGCCTACGCGCTGGAGGAGGTCACCGCCCTGGAGATCGACCGGG
AACACATCGAGCATCTGGGGACGCGGGCCCCGGCGCTGCTGCAGAACTTCGGCCGCATCCTCGAGGAGCGCCGCAGCAAG
GTGCGCGGCGCCCGGCGCGGCGAGCGGGTCGGCTAG

Upstream 100 bases:

>100_bases
AAAAGAGTTGGCGCAAAAGGCTTCCCACCATCTTCATCGACGTCGCACGGCTGGCCCTGATCTGCGTCGGGCTGGCGGTG
ATGTCGTCCTACATCTGGGA

Downstream 100 bases:

>100_bases
GGGCCGGCCGGGCCCGGCAGCGGGCCGCCTCACCCGGGCGTTTGCGGCCCGATACCCTGGTTCAATGGGTCTGCAAGCAC
CATTCCGCAGCGGTGGCGGC

Product: hypothetical protein

Products: NA

Alternate protein names: Mechanosensitive Ion Channel Protein; Integral Membrane Protein; Transporter MscS Family; Transmembrane Protein; Transmembrane Transporter; Mechanosensitive Ion Channel; Transcriptional Regulator Crp/Fnr Family; Mechanosensitive Channel Protein; Conserved Membrane Protein; Small-Conductance Mechanosensitive Channel; Potassium Efflux System KEFA

Number of amino acids: Translated: 331; Mature: 331

Protein sequence:

>331_residues
MRIGGLFTALGITSVVIGLMLQNSVGQIVSGLFMLFEQPFRIDDWLDTGTTSGRVVEVNWRSVHIDTGAGIRIMPNSMLA
TTSFINLSRPPGPHKVAIDTTFSTADAPDRVCATLSRVARALPQVKPGTVARTVPVGAAGYRTVIWLDSPADAGAAKATF
LRWAWYAARREELHLDGADDDFSTVQRVEHALDTVVAAALRLSAEEQRSLRSAARIVRYGADEIVEDAGQVPSAMTFLVS
GRVQLTATAEDGTVVPVSTLAEGEFLGLTALTRQPNLASAYALEEVTALEIDREHIEHLGTRAPALLQNFGRILEERRSK
VRGARRGERVG

Sequences:

>Translated_331_residues
MRIGGLFTALGITSVVIGLMLQNSVGQIVSGLFMLFEQPFRIDDWLDTGTTSGRVVEVNWRSVHIDTGAGIRIMPNSMLA
TTSFINLSRPPGPHKVAIDTTFSTADAPDRVCATLSRVARALPQVKPGTVARTVPVGAAGYRTVIWLDSPADAGAAKATF
LRWAWYAARREELHLDGADDDFSTVQRVEHALDTVVAAALRLSAEEQRSLRSAARIVRYGADEIVEDAGQVPSAMTFLVS
GRVQLTATAEDGTVVPVSTLAEGEFLGLTALTRQPNLASAYALEEVTALEIDREHIEHLGTRAPALLQNFGRILEERRSK
VRGARRGERVG
>Mature_331_residues
MRIGGLFTALGITSVVIGLMLQNSVGQIVSGLFMLFEQPFRIDDWLDTGTTSGRVVEVNWRSVHIDTGAGIRIMPNSMLA
TTSFINLSRPPGPHKVAIDTTFSTADAPDRVCATLSRVARALPQVKPGTVARTVPVGAAGYRTVIWLDSPADAGAAKATF
LRWAWYAARREELHLDGADDDFSTVQRVEHALDTVVAAALRLSAEEQRSLRSAARIVRYGADEIVEDAGQVPSAMTFLVS
GRVQLTATAEDGTVVPVSTLAEGEFLGLTALTRQPNLASAYALEEVTALEIDREHIEHLGTRAPALLQNFGRILEERRSK
VRGARRGERVG

Specific function: Unknown

COG id: COG0668

COG function: function code M; Small-conductance mechanosensitive channel

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35770; Mature: 35770

Theoretical pI: Translated: 6.53; Mature: 6.53

Prosite motif: PS50042 CNMP_BINDING_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIGGLFTALGITSVVIGLMLQNSVGQIVSGLFMLFEQPFRIDDWLDTGTTSGRVVEVNW
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCEEEEEEE
RSVHIDTGAGIRIMPNSMLATTSFINLSRPPGPHKVAIDTTFSTADAPDRVCATLSRVAR
EEEEEECCCCEEECCCCHHHHHHEEECCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHH
ALPQVKPGTVARTVPVGAAGYRTVIWLDSPADAGAAKATFLRWAWYAARREELHLDGADD
HCCCCCCCCEEEECCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHEECCCCCC
DFSTVQRVEHALDTVVAAALRLSAEEQRSLRSAARIVRYGADEIVEDAGQVPSAMTFLVS
HHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCHHHHHHHHCCCCHHHHHEEC
GRVQLTATAEDGTVVPVSTLAEGEFLGLTALTRQPNLASAYALEEVTALEIDREHIEHLG
CCEEEEEECCCCEEEEEHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCHHHHHHHC
TRAPALLQNFGRILEERRSKVRGARRGERVG
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MRIGGLFTALGITSVVIGLMLQNSVGQIVSGLFMLFEQPFRIDDWLDTGTTSGRVVEVNW
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCEEEEEEE
RSVHIDTGAGIRIMPNSMLATTSFINLSRPPGPHKVAIDTTFSTADAPDRVCATLSRVAR
EEEEEECCCCEEECCCCHHHHHHEEECCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHH
ALPQVKPGTVARTVPVGAAGYRTVIWLDSPADAGAAKATFLRWAWYAARREELHLDGADD
HCCCCCCCCEEEECCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHEECCCCCC
DFSTVQRVEHALDTVVAAALRLSAEEQRSLRSAARIVRYGADEIVEDAGQVPSAMTFLVS
HHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCHHHHHHHHCCCCHHHHHEEC
GRVQLTATAEDGTVVPVSTLAEGEFLGLTALTRQPNLASAYALEEVTALEIDREHIEHLG
CCEEEEEECCCCEEEEEHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCHHHHHHHC
TRAPALLQNFGRILEERRSKVRGARRGERVG
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA