| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41408297
Identifier: 41408297
GI number: 41408297
Start: 2443962
End: 2444882
Strand: Direct
Name: 41408297
Synonym: MAP2199
Alternate gene names: NA
Gene position: 2443962-2444882 (Clockwise)
Preceding gene: 41408296
Following gene: 41408298
Centisome position: 50.6
GC content: 63.19
Gene sequence:
>921_bases GTGGCCATCGACATGGAAGCCATGCTCGCCAAGATCAAGGATCGACAGTGGGCGCTCGCCGACATCGATTGGACCGCGCC CGGCGCCGACATGATCAGTGACGAACAGCGGCCACAGCTCAAGGCGTTCATGGCCGACCTGTGCTGGATCGAGAACATCG GCGCCAGGGGATTCGCGGCACTGGCGAAGAAGGCGCCCACCCCGACCATCGCCGAGATCTACCGCTACTTTCACGCCGAG GAGCAGCGGCACGCCAACGCCGAACTGGCGCTGATGAAACGCTGGGGCATGCTCACCGACGGTGAGATTCCCGAGCCGAA CGTGAATATCCGGCTGGCGATCGACTGGTTGGACCGTTGGGCCGACGACATGCCGCTGTCGCTGCTGGGCACCGTCATCC CGATGCTCGAGGTGGCACTGGACGGCGCCCTGTTGAAATTTCTCCTCGACGAGGTGCACGACCCCATCTGCCATCAGGTC TTCGAGAAGATCAACAATGACGAATCCCGCCATCTCGTCGTCGATTTCGAAGTCCTCGACATGATCGGGCACGCCAAGGT CCGGCGGTTGCTGATCGACTTCGTCGGTCACCATGCCACTCCGGGCCTCATCATCGGTGCGATCACCGGCGCACCGCTGA TCAACCGGATCCGCAACGAGATCACCGCCATGGGCATGGAGCCGGAGCGGCTCTACCGGGCGGTCAAACGATTCAAAGAG CTTGGCGATCGCGGCGAACGCACCACTCGGGTGCCGACCTATCGTTTCCTGAGGCGCTACGCCGGAGTTGTCACCAACCC ACGCCACCCCTACCACCTGCTGGCGAATTCGATGGTGTGGCTTTCCGACCGGTATCCGCGGCTGCTGCTTCCGCGGGTGC CATCCTGGGTGGAAGAACTCACCCACGAGCCGGCGGCGTGA
Upstream 100 bases:
>100_bases CTGGCACATCAAACGCCTTGCCCCGCAGGCCTATACGCGAGCAGCCGGCCTGGTGTCCCGAATCAACCTGCCCTGATCAC CCGACGGAAAGGAGCCTCCG
Downstream 100 bases:
>100_bases GCATGGCACGCGATCACGCCCACGCGGCGCTCATCATCGGAGCCGGCTTCACCGGTCTGGGTGCGGCGATCCGACTGGCC GAGGCCGGAGTCGACGACAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 306; Mature: 305
Protein sequence:
>306_residues MAIDMEAMLAKIKDRQWALADIDWTAPGADMISDEQRPQLKAFMADLCWIENIGARGFAALAKKAPTPTIAEIYRYFHAE EQRHANAELALMKRWGMLTDGEIPEPNVNIRLAIDWLDRWADDMPLSLLGTVIPMLEVALDGALLKFLLDEVHDPICHQV FEKINNDESRHLVVDFEVLDMIGHAKVRRLLIDFVGHHATPGLIIGAITGAPLINRIRNEITAMGMEPERLYRAVKRFKE LGDRGERTTRVPTYRFLRRYAGVVTNPRHPYHLLANSMVWLSDRYPRLLLPRVPSWVEELTHEPAA
Sequences:
>Translated_306_residues MAIDMEAMLAKIKDRQWALADIDWTAPGADMISDEQRPQLKAFMADLCWIENIGARGFAALAKKAPTPTIAEIYRYFHAE EQRHANAELALMKRWGMLTDGEIPEPNVNIRLAIDWLDRWADDMPLSLLGTVIPMLEVALDGALLKFLLDEVHDPICHQV FEKINNDESRHLVVDFEVLDMIGHAKVRRLLIDFVGHHATPGLIIGAITGAPLINRIRNEITAMGMEPERLYRAVKRFKE LGDRGERTTRVPTYRFLRRYAGVVTNPRHPYHLLANSMVWLSDRYPRLLLPRVPSWVEELTHEPAA >Mature_305_residues AIDMEAMLAKIKDRQWALADIDWTAPGADMISDEQRPQLKAFMADLCWIENIGARGFAALAKKAPTPTIAEIYRYFHAEE QRHANAELALMKRWGMLTDGEIPEPNVNIRLAIDWLDRWADDMPLSLLGTVIPMLEVALDGALLKFLLDEVHDPICHQVF EKINNDESRHLVVDFEVLDMIGHAKVRRLLIDFVGHHATPGLIIGAITGAPLINRIRNEITAMGMEPERLYRAVKRFKEL GDRGERTTRVPTYRFLRRYAGVVTNPRHPYHLLANSMVWLSDRYPRLLLPRVPSWVEELTHEPAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34981; Mature: 34850
Theoretical pI: Translated: 6.44; Mature: 6.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIDMEAMLAKIKDRQWALADIDWTAPGADMISDEQRPQLKAFMADLCWIENIGARGFAA CCCCHHHHHHHHHCCCEEEEECCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHH LAKKAPTPTIAEIYRYFHAEEQRHANAELALMKRWGMLTDGEIPEPNVNIRLAIDWLDRW HHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCEEEEEEHHHHHC ADDMPLSLLGTVIPMLEVALDGALLKFLLDEVHDPICHQVFEKINNDESRHLVVDFEVLD CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCEEEEHHHHHH MIGHAKVRRLLIDFVGHHATPGLIIGAITGAPLINRIRNEITAMGMEPERLYRAVKRFKE HHHHHHHHHHHHHHHHCCCCCCEEEEHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHH LGDRGERTTRVPTYRFLRRYAGVVTNPRHPYHLLANSMVWLSDRYPRLLLPRVPSWVEEL HHCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHCCHHEECCCCCCHHCCCCHHHHHHH THEPAA CCCCCC >Mature Secondary Structure AIDMEAMLAKIKDRQWALADIDWTAPGADMISDEQRPQLKAFMADLCWIENIGARGFAA CCCHHHHHHHHHCCCEEEEECCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHH LAKKAPTPTIAEIYRYFHAEEQRHANAELALMKRWGMLTDGEIPEPNVNIRLAIDWLDRW HHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCEEEEEEHHHHHC ADDMPLSLLGTVIPMLEVALDGALLKFLLDEVHDPICHQVFEKINNDESRHLVVDFEVLD CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCEEEEHHHHHH MIGHAKVRRLLIDFVGHHATPGLIIGAITGAPLINRIRNEITAMGMEPERLYRAVKRFKE HHHHHHHHHHHHHHHHCCCCCCEEEEHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHH LGDRGERTTRVPTYRFLRRYAGVVTNPRHPYHLLANSMVWLSDRYPRLLLPRVPSWVEEL HHCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHCCHHEECCCCCCHHCCCCHHHHHHH THEPAA CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA