| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41408216
Identifier: 41408216
GI number: 41408216
Start: 2345703
End: 2346506
Strand: Direct
Name: 41408216
Synonym: MAP2118
Alternate gene names: NA
Gene position: 2345703-2346506 (Clockwise)
Preceding gene: 41408206
Following gene: 41408217
Centisome position: 48.57
GC content: 70.02
Gene sequence:
>804_bases GTGACAAACAGCCCGTCGTCATACCTGGTGTTGGCGTCGCAGCGCAGCGGCAGCACGCTGCTGGTCGAATCGCTGCGGGC CACCGGCGTGGCCGGCGAGCCTCAGGAGTTCTTCCAGTACCTGCCGTCCACCAGCCAGGCGCCGCAGCCGCGGGAATGGT TCGCCGGGGTCGACGACGAGTCGATCCTGAGCCTGCTCGATCCCCTGGACGCGGGCACGCCGGACCTGGCTCCGCCCGAG ATCTGGCGCAGCTACATCCGCACGGTCGGCCGGACCCCCAACGGGGTGTGGGGCGGCAAGCTGATGTGGAACCAGACCCC GCTGCTGTTGGACCGTGCGAAGAACCTGCCGGATCGCAGCGGCGACGGGCTGCGGGCGGCCATCCGCGATGTGATCGGCG AGGAGCCGCTGCTGATTCACGTCTACCGGCCGGATGTGGTCTCGCAGGCGGTGTCGTTCTGGCGGGCGGTGCAGACGCGG GTCTGGCGCGGCCGGCCCGACCCGGCGCGCGACGCGCGCGCCACCTATCACGCCGGGGCGATCGCCCACGTCGTGACGAT GCTGCGCGCCCAGGAAGAGGGCTGGCGCAATTGGTTCGCCGAAGAGGACCTCAAACCCATGGAGATCCCGTATCCGGTGT TGTGGCGCAACCTGACTCAGGTGGTCGCCGCCATCCTCGAGCAGTTGGGGCTCGACCCGCAACTGGCGCCCGAACCGGTG CTGGAGCGCCAGGCGGACCACCGCTCCGACGAGTGGGTGGACCGCTACCGCGCCGACGCGGAGAAATACGGTCTGCCGAC CTGA
Upstream 100 bases:
>100_bases GCAAGGTTTTGCGTCGGCGTGACCACAACTTCGGCTGTCCAGGAACAGGTGGGCATCAAGTCGAGGAATAAGAAGTGCCG GTTGTGGATACACTTCGCCG
Downstream 100 bases:
>100_bases AATACGGCGGAGCTAAATTCAGGCCGAGCCAATCGCTTGGATGCGGCGGGAGCGACCGCCACGATTCCGTCAGCAGGCGT CCCGCGTGGGCCGCCACCGG
Product: hypothetical protein
Products: NA
Alternate protein names: Stf0 Sulphotransferase
Number of amino acids: Translated: 267; Mature: 266
Protein sequence:
>267_residues MTNSPSSYLVLASQRSGSTLLVESLRATGVAGEPQEFFQYLPSTSQAPQPREWFAGVDDESILSLLDPLDAGTPDLAPPE IWRSYIRTVGRTPNGVWGGKLMWNQTPLLLDRAKNLPDRSGDGLRAAIRDVIGEEPLLIHVYRPDVVSQAVSFWRAVQTR VWRGRPDPARDARATYHAGAIAHVVTMLRAQEEGWRNWFAEEDLKPMEIPYPVLWRNLTQVVAAILEQLGLDPQLAPEPV LERQADHRSDEWVDRYRADAEKYGLPT
Sequences:
>Translated_267_residues MTNSPSSYLVLASQRSGSTLLVESLRATGVAGEPQEFFQYLPSTSQAPQPREWFAGVDDESILSLLDPLDAGTPDLAPPE IWRSYIRTVGRTPNGVWGGKLMWNQTPLLLDRAKNLPDRSGDGLRAAIRDVIGEEPLLIHVYRPDVVSQAVSFWRAVQTR VWRGRPDPARDARATYHAGAIAHVVTMLRAQEEGWRNWFAEEDLKPMEIPYPVLWRNLTQVVAAILEQLGLDPQLAPEPV LERQADHRSDEWVDRYRADAEKYGLPT >Mature_266_residues TNSPSSYLVLASQRSGSTLLVESLRATGVAGEPQEFFQYLPSTSQAPQPREWFAGVDDESILSLLDPLDAGTPDLAPPEI WRSYIRTVGRTPNGVWGGKLMWNQTPLLLDRAKNLPDRSGDGLRAAIRDVIGEEPLLIHVYRPDVVSQAVSFWRAVQTRV WRGRPDPARDARATYHAGAIAHVVTMLRAQEEGWRNWFAEEDLKPMEIPYPVLWRNLTQVVAAILEQLGLDPQLAPEPVL ERQADHRSDEWVDRYRADAEKYGLPT
Specific function: Unknown
COG id: COG4424
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30044; Mature: 29913
Theoretical pI: Translated: 4.91; Mature: 4.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNSPSSYLVLASQRSGSTLLVESLRATGVAGEPQEFFQYLPSTSQAPQPREWFAGVDDE CCCCCCCEEEEEECCCCCHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCHHHHCCCCHH SILSLLDPLDAGTPDLAPPEIWRSYIRTVGRTPNGVWGGKLMWNQTPLLLDRAKNLPDRS HHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCEEEECCCHHHHHHHHCCCCCC GDGLRAAIRDVIGEEPLLIHVYRPDVVSQAVSFWRAVQTRVWRGRPDPARDARATYHAGA CCHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH IAHVVTMLRAQEEGWRNWFAEEDLKPMEIPYPVLWRNLTQVVAAILEQLGLDPQLAPEPV HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHH LERQADHRSDEWVDRYRADAEKYGLPT HHHHHCCCCHHHHHHHHHHHHHCCCCC >Mature Secondary Structure TNSPSSYLVLASQRSGSTLLVESLRATGVAGEPQEFFQYLPSTSQAPQPREWFAGVDDE CCCCCCEEEEEECCCCCHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCHHHHCCCCHH SILSLLDPLDAGTPDLAPPEIWRSYIRTVGRTPNGVWGGKLMWNQTPLLLDRAKNLPDRS HHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCEEEECCCHHHHHHHHCCCCCC GDGLRAAIRDVIGEEPLLIHVYRPDVVSQAVSFWRAVQTRVWRGRPDPARDARATYHAGA CCHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH IAHVVTMLRAQEEGWRNWFAEEDLKPMEIPYPVLWRNLTQVVAAILEQLGLDPQLAPEPV HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHH LERQADHRSDEWVDRYRADAEKYGLPT HHHHHCCCCHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA