| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is yeiH [C]
Identifier: 41408217
GI number: 41408217
Start: 2346674
End: 2347912
Strand: Direct
Name: yeiH [C]
Synonym: MAP2119
Alternate gene names: 41408217
Gene position: 2346674-2347912 (Clockwise)
Preceding gene: 41408216
Following gene: 41408220
Centisome position: 48.59
GC content: 66.83
Gene sequence:
>1239_bases CTGGGCGGCGCGGCTGGCGTCGGTTTCGGTGGATTGGTGGGCCACCGCGGTGGCGGGCGTGATCGTCGCGCTGGCGGTGG CCGACGTGCTCCCGAAGGTTCCGTGGTGACCGGCGTGAGCACCGTTCGCGTCGCACCCGACGAAACAGACGAAACAGCGG ACGCCACCTTCACCAGCACCCGCCCGCTCGACTACCTGCCGGGCATCCTGCTGCTGATCGGCGTGGGGGTGTTGGGCAAG TACGCCCAGATCTGGTGGAACGCGCTGGCCAAACACGAGCACTGGACGGTGCCCGACATCGAATATGTGTTGTGGGCCAT CGTGATCGGGCTGGTGATCACCAACACCGTCGGGCTGCACCCGATCTTTCGGCCCGGCGTGCTGACCTACGAATTCTGGC TGAAGGCCGGGATCGTGGCGCTCGGTTCGCGATTCGTGTTGGGCGACATCGCCAAGCTGGGCGGGATCAGCCTGGTGCAG ATCCTGGTGGACATGACCATCGCCGGGACGATCATCATCGCCGTGGCCCGCTGGTTCGGGTTGTCGGGCAAGCTCGGTTC GCTGTTGGCGATCGGCACGTCCATCTGCGGGGTGTCGGCCATCGTGGCGGCCAAGGGCGCGATCCGCGCGCGTAACTCCG ACGTCAGCTACGCGATCGCCGCGATTCTGGCGTTGGGCGCGGTGTCGCTGTTCGTGTTGCCGCCGCTAGGGCATGCGATC GGGCTGACCGATCACGAATTCGGTTTGTGGGCAGGGCTTTCGGTGGACAACACCGCCGAGACCACCGCCACCGGATACCT GTACTCCGAGCACGCCGGCAAGATCGCGGTGCTGGTCAAGTCGACCCGCAACGCGCTGATCGGTTTCGTGGTGCTGGGTT TCGCGCTGTTCTGGGCGGGCCGCGGGCAGGCCGACGAGATCGCCCCGGGGGTTCGGGCCAAGGCCGCCTTCATCTGGGCC AAATTCCCGAAGTTCGTGCTGGGCTTCCTGGTGGTCTCGGCGATCGCCACCGCGGGCTGGCTGACCAAGGGCCAGACGGC CAACCTCGCCAACGTGTCGAAATGGGCGTTCCTGCTGACCTTTGCCGGGGTGGGGCTCAACACCGACATCCGCCAGATCG CCCGCACCGGGTGGCGCCCGCTGGTGGTCGCGGTCATCGGGTTGACCGTGGTCGCCACCGTCTCGCTGGGCATCGTGCTG CTGACCTCGCGCGTATTCGGTTGGGGCGTAACCACTTAG
Upstream 100 bases:
>100_bases CGTCAGCAGGCGTCCCGCGTGGGCCGCCACCGGTTGCTCGAGGAGCGGACATGGTGAGTGACAATCGCGGCGATCACGAG GCGCCCGATCGTGGGCAGGA
Downstream 100 bases:
>100_bases GATTTAACCGCCCGGCCGGCGGTTCAGCCGACGTTGGCGCCGCCCTCGGCTATCCGGCGCACCGCGCGCAGGAACACGTC GATCTCCTCGAACGTGTTGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 412; Mature: 411
Protein sequence:
>412_residues MGGAAGVGFGGLVGHRGGGRDRRAGGGRRAPEGSVVTGVSTVRVAPDETDETADATFTSTRPLDYLPGILLLIGVGVLGK YAQIWWNALAKHEHWTVPDIEYVLWAIVIGLVITNTVGLHPIFRPGVLTYEFWLKAGIVALGSRFVLGDIAKLGGISLVQ ILVDMTIAGTIIIAVARWFGLSGKLGSLLAIGTSICGVSAIVAAKGAIRARNSDVSYAIAAILALGAVSLFVLPPLGHAI GLTDHEFGLWAGLSVDNTAETTATGYLYSEHAGKIAVLVKSTRNALIGFVVLGFALFWAGRGQADEIAPGVRAKAAFIWA KFPKFVLGFLVVSAIATAGWLTKGQTANLANVSKWAFLLTFAGVGLNTDIRQIARTGWRPLVVAVIGLTVVATVSLGIVL LTSRVFGWGVTT
Sequences:
>Translated_412_residues MGGAAGVGFGGLVGHRGGGRDRRAGGGRRAPEGSVVTGVSTVRVAPDETDETADATFTSTRPLDYLPGILLLIGVGVLGK YAQIWWNALAKHEHWTVPDIEYVLWAIVIGLVITNTVGLHPIFRPGVLTYEFWLKAGIVALGSRFVLGDIAKLGGISLVQ ILVDMTIAGTIIIAVARWFGLSGKLGSLLAIGTSICGVSAIVAAKGAIRARNSDVSYAIAAILALGAVSLFVLPPLGHAI GLTDHEFGLWAGLSVDNTAETTATGYLYSEHAGKIAVLVKSTRNALIGFVVLGFALFWAGRGQADEIAPGVRAKAAFIWA KFPKFVLGFLVVSAIATAGWLTKGQTANLANVSKWAFLLTFAGVGLNTDIRQIARTGWRPLVVAVIGLTVVATVSLGIVL LTSRVFGWGVTT >Mature_411_residues GGAAGVGFGGLVGHRGGGRDRRAGGGRRAPEGSVVTGVSTVRVAPDETDETADATFTSTRPLDYLPGILLLIGVGVLGKY AQIWWNALAKHEHWTVPDIEYVLWAIVIGLVITNTVGLHPIFRPGVLTYEFWLKAGIVALGSRFVLGDIAKLGGISLVQI LVDMTIAGTIIIAVARWFGLSGKLGSLLAIGTSICGVSAIVAAKGAIRARNSDVSYAIAAILALGAVSLFVLPPLGHAIG LTDHEFGLWAGLSVDNTAETTATGYLYSEHAGKIAVLVKSTRNALIGFVVLGFALFWAGRGQADEIAPGVRAKAAFIWAK FPKFVLGFLVVSAIATAGWLTKGQTANLANVSKWAFLLTFAGVGLNTDIRQIARTGWRPLVVAVIGLTVVATVSLGIVLL TSRVFGWGVTT
Specific function: Unknown
COG id: COG2855
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential)
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0324 family
Homologues:
Organism=Escherichia coli, GI1788482, Length=292, Percent_Identity=26.7123287671233, Blast_Score=82, Evalue=6e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y2119_MYCPA (Q73Y38)
Other databases:
- EMBL: AF232751 - EMBL: AE016958 - RefSeq: NP_961053.1 - EnsemblBacteria: EBMYCT00000039823 - GeneID: 2719241 - GenomeReviews: AE016958_GR - KEGG: mpa:MAP2119 - NMPDR: fig|262316.1.peg.2119 - GeneTree: EBGT00050000016449 - HOGENOM: HBG499375 - OMA: FTTRFRE - ProtClustDB: CLSK763549 - InterPro: IPR018383
Pfam domain/function: PF03601 Cons_hypoth698
EC number: NA
Molecular weight: Translated: 43004; Mature: 42873
Theoretical pI: Translated: 10.35; Mature: 10.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0xf8a3b34)-; HASH(0x10672df0)-; HASH(0x10794f50)-; HASH(0xf31d76c)-; HASH(0xf13faa4)-; HASH(0x10467978)-; HASH(0x103d5f34)-; HASH(0x106b1f2c)-; HASH(0x10751ef8)-; HASH(0xf27f974)-;
Cys/Met content:
0.2 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 0.7 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 0.2 %Met (Mature Protein) 0.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGGAAGVGFGGLVGHRGGGRDRRAGGGRRAPEGSVVTGVSTVRVAPDETDETADATFTST CCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCEEECCEEEEECCCCCCCCCCCCCCCC RPLDYLPGILLLIGVGVLGKYAQIWWNALAKHEHWTVPDIEYVLWAIVIGLVITNTVGLH CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCC PIFRPGVLTYEFWLKAGIVALGSRFVLGDIAKLGGISLVQILVDMTIAGTIIIAVARWFG CCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHC LSGKLGSLLAIGTSICGVSAIVAAKGAIRARNSDVSYAIAAILALGAVSLFVLPPLGHAI CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHC GLTDHEFGLWAGLSVDNTAETTATGYLYSEHAGKIAVLVKSTRNALIGFVVLGFALFWAG CCCCCCCCEEECCCCCCCCCHHHCCEEEECCCCEEEEEEECHHHHHHHHHHHHHHHHHCC RGQADEIAPGVRAKAAFIWAKFPKFVLGFLVVSAIATAGWLTKGQTANLANVSKWAFLLT CCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH FAGVGLNTDIRQIARTGWRPLVVAVIGLTVVATVSLGIVLLTSRVFGWGVTT HHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH >Mature Secondary Structure GGAAGVGFGGLVGHRGGGRDRRAGGGRRAPEGSVVTGVSTVRVAPDETDETADATFTST CCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCEEECCEEEEECCCCCCCCCCCCCCCC RPLDYLPGILLLIGVGVLGKYAQIWWNALAKHEHWTVPDIEYVLWAIVIGLVITNTVGLH CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCC PIFRPGVLTYEFWLKAGIVALGSRFVLGDIAKLGGISLVQILVDMTIAGTIIIAVARWFG CCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHC LSGKLGSLLAIGTSICGVSAIVAAKGAIRARNSDVSYAIAAILALGAVSLFVLPPLGHAI CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHC GLTDHEFGLWAGLSVDNTAETTATGYLYSEHAGKIAVLVKSTRNALIGFVVLGFALFWAG CCCCCCCCEEECCCCCCCCCHHHCCEEEECCCCEEEEEEECHHHHHHHHHHHHHHHHHCC RGQADEIAPGVRAKAAFIWAKFPKFVLGFLVVSAIATAGWLTKGQTANLANVSKWAFLLT CCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH FAGVGLNTDIRQIARTGWRPLVVAVIGLTVVATVSLGIVLLTSRVFGWGVTT HHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11549181