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The map label for this gene is yrbE [C]

Identifier: 41408215

GI number: 41408215

Start: 2344540

End: 2345307

Strand: Reverse

Name: yrbE [C]

Synonym: MAP2117c

Alternate gene names: 41408215

Gene position: 2345307-2344540 (Counterclockwise)

Preceding gene: 41408218

Following gene: 41408214

Centisome position: 48.56

GC content: 64.32

Gene sequence:

>768_bases
GTGAACGCGACCGCCATCGCCAAGCCCATGACGGCGCTCGGCCAATTCTTCTTGCTCAGCGCCGAGGCGCTGGCCGCCGC
GGTTCGCGGGCCGTGGGCGTGGCGGGAAATTCTCGAACAGATCTGGTTCGTGGCACGGGTTTCCATTTTTCCGACCATCA
TGTTGTCGATTCCGTACACCGTGCTGATTGTTTTCGTGCTCAACATTCTGCTGGTGGAGATCGGCGCCGGCGACCTGTCC
GGCGCGGGGGCCGGGCTGGCGTCGGTCACCCAAGTGGGGCCGGTCGTCACGGCGATGGTCGTTTCGGGCGCCGGATCGAC
CGCCATGTGCGCCGACCTGGGCGCGCGCACCATCCGCGAGGAAATCGACGCGATGAAGGTGATCGGCGTCAATCCCGTTC
AGGCACTTGTGGTTCCGCGCATCATCGCGGCCACCTTCGTGGCGGTCATGCTCTACGCGGTGGTCGCCGTCATCGGATTG
ACGGGCAGCTACATCTTCGTGGTCTTCGTCCAGCACGTCACGCCGGGCGCCTTTGTCGCGGGAATGACGTTGGTCACCGG
GCTGCCGCAGGTGGTGATCTCGCTGATCAAGGCGACCCTGTTCGGTCTGTCCGCGGGACTGATCGCCTGCTACAAGGGTC
TCTCGGTGGGCGGCGGCCCCACCGGCGTCGGCAACGCGGTGAACGAGACGGTGGTGTTCTCCTTCATGGCGCTGTTCTTC
ATCAATATTTTGACCACCGCGCTCGGGGTGAAGGTGACGGCCAAATGA

Upstream 100 bases:

>100_bases
AACAGCGCTGTTTGCTTGGGAGCCAGGTGATTACGAACGGATAAACCGTGTTACGAAATATGGGGGTCGGGTTGAGTCAG
CGAATGAGCGGGCGAGCACC

Downstream 100 bases:

>100_bases
CCGAGATCGCCCGCGAGCCGTCGCGGTTCGCTGCGCTGGGGCCCAGGCTCGTCGAGTCGACCCGCAAGCTGGGGGAGCAG
ACCGTGTTCTACGGCCAATC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 255; Mature: 255

Protein sequence:

>255_residues
MNATAIAKPMTALGQFFLLSAEALAAAVRGPWAWREILEQIWFVARVSIFPTIMLSIPYTVLIVFVLNILLVEIGAGDLS
GAGAGLASVTQVGPVVTAMVVSGAGSTAMCADLGARTIREEIDAMKVIGVNPVQALVVPRIIAATFVAVMLYAVVAVIGL
TGSYIFVVFVQHVTPGAFVAGMTLVTGLPQVVISLIKATLFGLSAGLIACYKGLSVGGGPTGVGNAVNETVVFSFMALFF
INILTTALGVKVTAK

Sequences:

>Translated_255_residues
MNATAIAKPMTALGQFFLLSAEALAAAVRGPWAWREILEQIWFVARVSIFPTIMLSIPYTVLIVFVLNILLVEIGAGDLS
GAGAGLASVTQVGPVVTAMVVSGAGSTAMCADLGARTIREEIDAMKVIGVNPVQALVVPRIIAATFVAVMLYAVVAVIGL
TGSYIFVVFVQHVTPGAFVAGMTLVTGLPQVVISLIKATLFGLSAGLIACYKGLSVGGGPTGVGNAVNETVVFSFMALFF
INILTTALGVKVTAK
>Mature_255_residues
MNATAIAKPMTALGQFFLLSAEALAAAVRGPWAWREILEQIWFVARVSIFPTIMLSIPYTVLIVFVLNILLVEIGAGDLS
GAGAGLASVTQVGPVVTAMVVSGAGSTAMCADLGARTIREEIDAMKVIGVNPVQALVVPRIIAATFVAVMLYAVVAVIGL
TGSYIFVVFVQHVTPGAFVAGMTLVTGLPQVVISLIKATLFGLSAGLIACYKGLSVGGGPTGVGNAVNETVVFSFMALFF
INILTTALGVKVTAK

Specific function: Could be part of an ABC transporter complex [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mlaE permease family [H]

Homologues:

Organism=Escherichia coli, GI1789585, Length=164, Percent_Identity=25.609756097561, Blast_Score=63, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003453 [H]

Pfam domain/function: PF02405 DUF140 [H]

EC number: NA

Molecular weight: Translated: 26288; Mature: 26288

Theoretical pI: Translated: 8.71; Mature: 8.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNATAIAKPMTALGQFFLLSAEALAAAVRGPWAWREILEQIWFVARVSIFPTIMLSIPYT
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLIVFVLNILLVEIGAGDLSGAGAGLASVTQVGPVVTAMVVSGAGSTAMCADLGARTIRE
HHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
EIDAMKVIGVNPVQALVVPRIIAATFVAVMLYAVVAVIGLTGSYIFVVFVQHVTPGAFVA
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHH
GMTLVTGLPQVVISLIKATLFGLSAGLIACYKGLSVGGGPTGVGNAVNETVVFSFMALFF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHH
INILTTALGVKVTAK
HHHHHHHHCCEEECC
>Mature Secondary Structure
MNATAIAKPMTALGQFFLLSAEALAAAVRGPWAWREILEQIWFVARVSIFPTIMLSIPYT
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLIVFVLNILLVEIGAGDLSGAGAGLASVTQVGPVVTAMVVSGAGSTAMCADLGARTIRE
HHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
EIDAMKVIGVNPVQALVVPRIIAATFVAVMLYAVVAVIGLTGSYIFVVFVQHVTPGAFVA
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHH
GMTLVTGLPQVVISLIKATLFGLSAGLIACYKGLSVGGGPTGVGNAVNETVVFSFMALFF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHH
INILTTALGVKVTAK
HHHHHHHHCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA