| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is mce3
Identifier: 41408214
GI number: 41408214
Start: 2342422
End: 2343690
Strand: Reverse
Name: mce3
Synonym: MAP2116c
Alternate gene names: NA
Gene position: 2343690-2342422 (Counterclockwise)
Preceding gene: 41408215
Following gene: 41408213
Centisome position: 48.53
GC content: 66.27
Gene sequence:
>1269_bases ATGAGCAAACACAGCAGCAGCGGCCTCATCCGGCGCGGCGGAAACCAGCGCAACGGGATCGACCCCATCTGGTGGGCGCC CACCCTGTTCATCGTCATCGGCGGACTGGTCGCGTTGACCGCGGCCTCCTTCTCCGGGAAGTTCCAGACCTTCGTCCCGC TCACGCTGGTGTCCGACCGGGCGGGACTGGTGATGGAGGACGGCGCCAAGGTCAAGTTGCGCGGTGTGCAGATCGGGCAG GTCGCCTCCATCGGCACCGACGTGAAGACCGCCCGGCTGCAGCTGAAGATCCAGCCGGGCCCGTTCCGATATCTGCCGAG CAACCTGGAAGCCGAGATCAAATCGACCACCGCCTTCGGCTCCAAATTCGTCGACCTGATCGTTCCCGAGCGGCCCAGCG CCAGCCCGCTCAAGCCGGGCGCGGTGCTGCGTTCACGTAACGTCACCGTCGAGGTGAACACCGTCTTCGAGAACCTGCAG GCGGTCGTCCAGGCGCTCGACCCGGCCAAGCTCAACGCCATCCTGTCCGCGTTCGCCCAGTCGGTGCGCGGCAAGGGCGA GCGGATCGGCGAAGCCATCACCGACGCCAATAGCCTTCTGCGCACCGTCAATTCACGCATGGACACCATCGGTGAGGACT GGCGGCTGTTCGGGGCGACCACCGGCGTCTACTCCGACGCGGCGCAACACATCCTGTCGATTCTCGACTCGGCGAGCACC ACCAGCAACACCATCACCGACAACCAGCGCTCGCTCGACTCGCTGCTGCTGTCGGCCGTCGGCTTCAGCCAGACCGGCAT CAACGTCATCGGAGCCAACGAATCCAACATCGTGCGAGCGATGAACCTGCTCGATCCCACCATCGCGCTGATGCAGAAAT ACTCCCCGACCTACACCTGCCTGTTCCAGGGCGCCCAGTGGTACGTCGACCACGGCGGACGAGATGCCTTGGGCGGCAAC GGATATTCGGTGATCCTGGACGCGGCTCTGCTGTTCGGCGATGACCCGTACCGCTATCCCAAACACCTGCCCAAGGTCAA CGCGACCGGCGGCCCCGGCGGCAGGCCCAGCTGTGGTTCGCTGCCCGACCCCAGCGCCAACTTCCCGGTGCGGGCCCTGG TCACCGACACCGGTTGGGGAGCCGCGCCGAACGAGATCCGCACCAACGTGGCCGCGGGTAACCCGTGGTGGGCCAACTGG TTCCCGACCACCAAGAACCCGCCCGAAGCGCCGCGCTACTTCTGGCGGGGAGGGCAGCCACCGCCATGA
Upstream 100 bases:
>100_bases GTCGGTGCGGTCGTCGATGATCGTCACCGCCTTTGTGTGCCTGATGATTTCGCTGTCCGTGTACGGGCAGTCCGGCAACT TCAACCTGTCGGGATAGCCG
Downstream 100 bases:
>100_bases GAAGGAAATTGTCGAGCATCGCCTGGCGGGTGGCGATCTTCACCGCGGTCTGCCTGCTGTTCACCTTCACGCTCATCGCG GTGTTCGGTCAGCTGCGCTT
Product: Mce3
Products: NA
Alternate protein names: Mce Family Protein; Secreted Protein; MCE-Family A; Virulence Factor; MCE-Family Protein; Mce Family A; MCE Family Protein; Mce-Related Protein; Cell Invasion Protein; MCE-Family; Virulence Factor MCE-Like Protein
Number of amino acids: Translated: 422; Mature: 421
Protein sequence:
>422_residues MSKHSSSGLIRRGGNQRNGIDPIWWAPTLFIVIGGLVALTAASFSGKFQTFVPLTLVSDRAGLVMEDGAKVKLRGVQIGQ VASIGTDVKTARLQLKIQPGPFRYLPSNLEAEIKSTTAFGSKFVDLIVPERPSASPLKPGAVLRSRNVTVEVNTVFENLQ AVVQALDPAKLNAILSAFAQSVRGKGERIGEAITDANSLLRTVNSRMDTIGEDWRLFGATTGVYSDAAQHILSILDSAST TSNTITDNQRSLDSLLLSAVGFSQTGINVIGANESNIVRAMNLLDPTIALMQKYSPTYTCLFQGAQWYVDHGGRDALGGN GYSVILDAALLFGDDPYRYPKHLPKVNATGGPGGRPSCGSLPDPSANFPVRALVTDTGWGAAPNEIRTNVAAGNPWWANW FPTTKNPPEAPRYFWRGGQPPP
Sequences:
>Translated_422_residues MSKHSSSGLIRRGGNQRNGIDPIWWAPTLFIVIGGLVALTAASFSGKFQTFVPLTLVSDRAGLVMEDGAKVKLRGVQIGQ VASIGTDVKTARLQLKIQPGPFRYLPSNLEAEIKSTTAFGSKFVDLIVPERPSASPLKPGAVLRSRNVTVEVNTVFENLQ AVVQALDPAKLNAILSAFAQSVRGKGERIGEAITDANSLLRTVNSRMDTIGEDWRLFGATTGVYSDAAQHILSILDSAST TSNTITDNQRSLDSLLLSAVGFSQTGINVIGANESNIVRAMNLLDPTIALMQKYSPTYTCLFQGAQWYVDHGGRDALGGN GYSVILDAALLFGDDPYRYPKHLPKVNATGGPGGRPSCGSLPDPSANFPVRALVTDTGWGAAPNEIRTNVAAGNPWWANW FPTTKNPPEAPRYFWRGGQPPP >Mature_421_residues SKHSSSGLIRRGGNQRNGIDPIWWAPTLFIVIGGLVALTAASFSGKFQTFVPLTLVSDRAGLVMEDGAKVKLRGVQIGQV ASIGTDVKTARLQLKIQPGPFRYLPSNLEAEIKSTTAFGSKFVDLIVPERPSASPLKPGAVLRSRNVTVEVNTVFENLQA VVQALDPAKLNAILSAFAQSVRGKGERIGEAITDANSLLRTVNSRMDTIGEDWRLFGATTGVYSDAAQHILSILDSASTT SNTITDNQRSLDSLLLSAVGFSQTGINVIGANESNIVRAMNLLDPTIALMQKYSPTYTCLFQGAQWYVDHGGRDALGGNG YSVILDAALLFGDDPYRYPKHLPKVNATGGPGGRPSCGSLPDPSANFPVRALVTDTGWGAAPNEIRTNVAAGNPWWANWF PTTKNPPEAPRYFWRGGQPPP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45203; Mature: 45072
Theoretical pI: Translated: 9.62; Mature: 9.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKHSSSGLIRRGGNQRNGIDPIWWAPTLFIVIGGLVALTAASFSGKFQTFVPLTLVSDR CCCCCCCCHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEECCC AGLVMEDGAKVKLRGVQIGQVASIGTDVKTARLQLKIQPGPFRYLPSNLEAEIKSTTAFG CCEEEECCCEEEEEEEEECCHHHCCCCCEEEEEEEEECCCCCEECCCCCCHHHHHHHHHH SKFVDLIVPERPSASPLKPGAVLRSRNVTVEVNTVFENLQAVVQALDPAKLNAILSAFAQ HHEEEEEECCCCCCCCCCCCCEEECCCCEEEHHHHHHHHHHHHHHCCHHHHHHHHHHHHH SVRGKGERIGEAITDANSLLRTVNSRMDTIGEDWRLFGATTGVYSDAAQHILSILDSAST HHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHCCCC TSNTITDNQRSLDSLLLSAVGFSQTGINVIGANESNIVRAMNLLDPTIALMQKYSPTYTC CCCCCCCCHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHCCCCEEE LFQGAQWYVDHGGRDALGGNGYSVILDAALLFGDDPYRYPKHLPKVNATGGPGGRPSCGS EECCCEEEEECCCCCCCCCCCHHHEEHHHHHHCCCCCCCHHHCCCCCCCCCCCCCCCCCC LPDPSANFPVRALVTDTGWGAAPNEIRTNVAAGNPWWANWFPTTKNPPEAPRYFWRGGQP CCCCCCCCCEEEEEECCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCC PP CC >Mature Secondary Structure SKHSSSGLIRRGGNQRNGIDPIWWAPTLFIVIGGLVALTAASFSGKFQTFVPLTLVSDR CCCCCCCHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEECCC AGLVMEDGAKVKLRGVQIGQVASIGTDVKTARLQLKIQPGPFRYLPSNLEAEIKSTTAFG CCEEEECCCEEEEEEEEECCHHHCCCCCEEEEEEEEECCCCCEECCCCCCHHHHHHHHHH SKFVDLIVPERPSASPLKPGAVLRSRNVTVEVNTVFENLQAVVQALDPAKLNAILSAFAQ HHEEEEEECCCCCCCCCCCCCEEECCCCEEEHHHHHHHHHHHHHHCCHHHHHHHHHHHHH SVRGKGERIGEAITDANSLLRTVNSRMDTIGEDWRLFGATTGVYSDAAQHILSILDSAST HHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHCCCC TSNTITDNQRSLDSLLLSAVGFSQTGINVIGANESNIVRAMNLLDPTIALMQKYSPTYTC CCCCCCCCHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHCCCCEEE LFQGAQWYVDHGGRDALGGNGYSVILDAALLFGDDPYRYPKHLPKVNATGGPGGRPSCGS EECCCEEEEECCCCCCCCCCCHHHEEHHHHHHCCCCCCCHHHCCCCCCCCCCCCCCCCCC LPDPSANFPVRALVTDTGWGAAPNEIRTNVAAGNPWWANWFPTTKNPPEAPRYFWRGGQP CCCCCCCCCEEEEEECCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCC PP CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA