Definition Mycobacterium avium subsp. paratuberculosis K-10, complete genome.
Accession NC_002944
Length 4,829,781

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The map label for this gene is 41408211

Identifier: 41408211

GI number: 41408211

Start: 2338891

End: 2340225

Strand: Reverse

Name: 41408211

Synonym: MAP2113c

Alternate gene names: NA

Gene position: 2340225-2338891 (Counterclockwise)

Preceding gene: 41408212

Following gene: 41408210

Centisome position: 48.45

GC content: 67.57

Gene sequence:

>1335_bases
ATGACCATCACTCGAGACGCCCTGCGCAAGGCGACCGCGCTGAGCCTGGTCCTGACGCTGGCCGTGGCGAGCGTGCTGGT
CGGCGGCAAGCTGTGGCGGGCCGTCGAAAAGAACAGCTACGCGGCGTATTTCGCGGAGACCAACGGCTTGTTCGTCGGCG
ACGAGGTCCGCATCCTCGGCGTCGCCGTCGGCGCGATCGACAAGATCGAACCCCAATCCGCCGGCTCGAAAGTGACGTTC
TCCGTCGACAAGAAGTACGCGATCCCGGCCGCTGCCCGCGCCGCCGTGCTGTCGCCATCGCTGGTGACCGCCCGGGCGAT
CCAGCTGGTGCCGGCATACTCCGGTGGGCCCACATTGAGCCCCGGCGCGGCGATCCCGCTGAGCCGCACCGCGGTTCCGG
TGGAGTGGGACGATTTCCGCAAGCAGCTGGAGAAACTGACCGACGCGCTGCAGCCCACCACCGCGGGCGGGGTGAACTCG
GTCGGCGAATTCGTCAACTCGGCCGCCGACAATCTCCGCGGCCAGGGGGACACCGCCCGCGACACGGTACTCAAGCTCTC
CGAAGCGATTTCGGCGCTCGGTGACCACGCCGATGACATCTTCAGCACGGTGCGCAACCTGCAACTGCTGGTGTCCGCGC
TGTACTCCAGCAGCGACCTGCTGGCCTCGTTCAACACCAACCTGGCCGCCGTGACGACCCTGCTGACCAACACGCCCAAC
GAGGTGGGCAGTGCGCTGAAGTCGCTGGACGGGGCGCTGAGCGATGTGCGCGATTTCCTGGCGGAGAACCGCGAGGCGAT
GGGTGTCACGGTCGACCGCCTGGGCTCCATCACCACCGCGCTCAACGACAGTCGCGGTGACGTCAAGCAGATCCTGCACA
TCGCCCCCACGGTGTTCCAGAACTTCTTGAACATCTACCAGCCGGCCCAGAGCGCGATGACGGGCATCCTGGCGCTGAAC
AACTTCGCCGATATTCCCCAATTCATCTGCAGCTCAATCGAAGCGGCGTCGCGGGCCCGGCTGGCGCGGGTATCCAAACT
GTGCCTGCAATACCTCAACCCGATCATCAAGAACCGCATCTACAACTACATCCCGGCGGGGATCAACCCGTTCGTCGGTA
CCCAGGCCCGCCCCAGCGAGATCACCTACAGCGAGGACTGGCTGCGGCCCGGGTACACGCCCCCGGACGGCGGCCCGCCC
CCCGAGGCGCCGGCGCCTCCCGGCCAGCCCGCGCCCGCCGATCAGCCGCCCGCCGAACCCGGCCCGCCACCGAACCCGAC
GAGCAACTCGCTGCAGGTGCTGCGGGACCTGATGCTGCCGACGGGGCCGTCATGA

Upstream 100 bases:

>100_bases
ACGCGCCGGTGCCGCTGTGGTCGCAGCCGCCGTCGCCGCCGCCGTCCACGCCACCGGTGCGGACCATCCCGCCGCCCTCG
CCCCACGAATTCGATCAGCC

Downstream 100 bases:

>100_bases
GACGCGCGGTCGTCGCAGCACTCGTGGTAGCTTGCGCGGCAGCGCTTTCCGGGTGCGGCTGGCGTGGCTTGAATTCGCTG
CGGCTGCCCGGCACCGCGGG

Product: hypothetical protein

Products: NA

Alternate protein names: Mce Family Protein; MCE-Family D; Secreted Protein; MCE Family Protein; Mce Family D; MCE-Family Protein; Mce-Related Protein; MCE-Family; Virulence Factor MCE-Like Protein; LOW QUALITY PROTEIN Protein

Number of amino acids: Translated: 444; Mature: 443

Protein sequence:

>444_residues
MTITRDALRKATALSLVLTLAVASVLVGGKLWRAVEKNSYAAYFAETNGLFVGDEVRILGVAVGAIDKIEPQSAGSKVTF
SVDKKYAIPAAARAAVLSPSLVTARAIQLVPAYSGGPTLSPGAAIPLSRTAVPVEWDDFRKQLEKLTDALQPTTAGGVNS
VGEFVNSAADNLRGQGDTARDTVLKLSEAISALGDHADDIFSTVRNLQLLVSALYSSSDLLASFNTNLAAVTTLLTNTPN
EVGSALKSLDGALSDVRDFLAENREAMGVTVDRLGSITTALNDSRGDVKQILHIAPTVFQNFLNIYQPAQSAMTGILALN
NFADIPQFICSSIEAASRARLARVSKLCLQYLNPIIKNRIYNYIPAGINPFVGTQARPSEITYSEDWLRPGYTPPDGGPP
PEAPAPPGQPAPADQPPAEPGPPPNPTSNSLQVLRDLMLPTGPS

Sequences:

>Translated_444_residues
MTITRDALRKATALSLVLTLAVASVLVGGKLWRAVEKNSYAAYFAETNGLFVGDEVRILGVAVGAIDKIEPQSAGSKVTF
SVDKKYAIPAAARAAVLSPSLVTARAIQLVPAYSGGPTLSPGAAIPLSRTAVPVEWDDFRKQLEKLTDALQPTTAGGVNS
VGEFVNSAADNLRGQGDTARDTVLKLSEAISALGDHADDIFSTVRNLQLLVSALYSSSDLLASFNTNLAAVTTLLTNTPN
EVGSALKSLDGALSDVRDFLAENREAMGVTVDRLGSITTALNDSRGDVKQILHIAPTVFQNFLNIYQPAQSAMTGILALN
NFADIPQFICSSIEAASRARLARVSKLCLQYLNPIIKNRIYNYIPAGINPFVGTQARPSEITYSEDWLRPGYTPPDGGPP
PEAPAPPGQPAPADQPPAEPGPPPNPTSNSLQVLRDLMLPTGPS
>Mature_443_residues
TITRDALRKATALSLVLTLAVASVLVGGKLWRAVEKNSYAAYFAETNGLFVGDEVRILGVAVGAIDKIEPQSAGSKVTFS
VDKKYAIPAAARAAVLSPSLVTARAIQLVPAYSGGPTLSPGAAIPLSRTAVPVEWDDFRKQLEKLTDALQPTTAGGVNSV
GEFVNSAADNLRGQGDTARDTVLKLSEAISALGDHADDIFSTVRNLQLLVSALYSSSDLLASFNTNLAAVTTLLTNTPNE
VGSALKSLDGALSDVRDFLAENREAMGVTVDRLGSITTALNDSRGDVKQILHIAPTVFQNFLNIYQPAQSAMTGILALNN
FADIPQFICSSIEAASRARLARVSKLCLQYLNPIIKNRIYNYIPAGINPFVGTQARPSEITYSEDWLRPGYTPPDGGPPP
EAPAPPGQPAPADQPPAEPGPPPNPTSNSLQVLRDLMLPTGPS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46869; Mature: 46737

Theoretical pI: Translated: 5.08; Mature: 5.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTITRDALRKATALSLVLTLAVASVLVGGKLWRAVEKNSYAAYFAETNGLFVGDEVRILG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCEEECCCEEEEE
VAVGAIDKIEPQSAGSKVTFSVDKKYAIPAAARAAVLSPSLVTARAIQLVPAYSGGPTLS
EHHHHHHCCCCCCCCCEEEEEECCCCCCCHHHHHHHCCCHHHHHHHHHHEECCCCCCCCC
PGAAIPLSRTAVPVEWDDFRKQLEKLTDALQPTTAGGVNSVGEFVNSAADNLRGQGDTAR
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCHHH
DTVLKLSEAISALGDHADDIFSTVRNLQLLVSALYSSSDLLASFNTNLAAVTTLLTNTPN
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHCCCH
EVGSALKSLDGALSDVRDFLAENREAMGVTVDRLGSITTALNDSRGDVKQILHIAPTVFQ
HHHHHHHHHHHHHHHHHHHHHCCCHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
NFLNIYQPAQSAMTGILALNNFADIPQFICSSIEAASRARLARVSKLCLQYLNPIIKNRI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YNYIPAGINPFVGTQARPSEITYSEDWLRPGYTPPDGGPPPEAPAPPGQPAPADQPPAEP
HHHCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GPPPNPTSNSLQVLRDLMLPTGPS
CCCCCCCCHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
TITRDALRKATALSLVLTLAVASVLVGGKLWRAVEKNSYAAYFAETNGLFVGDEVRILG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCEEECCCEEEEE
VAVGAIDKIEPQSAGSKVTFSVDKKYAIPAAARAAVLSPSLVTARAIQLVPAYSGGPTLS
EHHHHHHCCCCCCCCCEEEEEECCCCCCCHHHHHHHCCCHHHHHHHHHHEECCCCCCCCC
PGAAIPLSRTAVPVEWDDFRKQLEKLTDALQPTTAGGVNSVGEFVNSAADNLRGQGDTAR
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCHHH
DTVLKLSEAISALGDHADDIFSTVRNLQLLVSALYSSSDLLASFNTNLAAVTTLLTNTPN
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHCCCH
EVGSALKSLDGALSDVRDFLAENREAMGVTVDRLGSITTALNDSRGDVKQILHIAPTVFQ
HHHHHHHHHHHHHHHHHHHHHCCCHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
NFLNIYQPAQSAMTGILALNNFADIPQFICSSIEAASRARLARVSKLCLQYLNPIIKNRI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YNYIPAGINPFVGTQARPSEITYSEDWLRPGYTPPDGGPPPEAPAPPGQPAPADQPPAEP
HHHCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GPPPNPTSNSLQVLRDLMLPTGPS
CCCCCCCCHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA