Definition Mycobacterium avium subsp. paratuberculosis K-10, complete genome.
Accession NC_002944
Length 4,829,781

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The map label for this gene is lprM

Identifier: 41408210

GI number: 41408210

Start: 2337773

End: 2338894

Strand: Reverse

Name: lprM

Synonym: MAP2112c

Alternate gene names: NA

Gene position: 2338894-2337773 (Counterclockwise)

Preceding gene: 41408211

Following gene: 41408209

Centisome position: 48.43

GC content: 67.29

Gene sequence:

>1122_bases
ATGAGACGCGCGGTCGTCGCAGCACTCGTGGTAGCTTGCGCGGCAGCGCTTTCCGGGTGCGGCTGGCGTGGCTTGAATTC
GCTGCGGCTGCCCGGCACCGCGGGCGGGGGACCGGGCTCCTATACCATCCAGGCGCAGATGCCCGATGTGGTGACCATCC
AGGAAAACACCCGCGTCCGGGTGGACGACGTCAACGTCGGCAACGTCACCAAGATCGAACTGCAGGACTGGCACGCCCTG
GTCACCATGCGCATCGACGGTGACGTGCACCTGCCGGCCAACTCGACCGCCAAGCTCGGCCAGACCAGCCTGCTCGGGTC
GATGCACATCGAACTCGCACCACCCAAAGGCGAGCCGCCCGTCGGCCGGCTCACGGCCGGCTCGGTCATCCCGTTGTCGC
GGGCGAGCCTGTATCCCACCACCGAGCAGACGCTGGCCTCGGTGTCGATTCTGCTCAACGGTGGCGGAATCGGGCAGCTG
CAGGAGATCACCCAGGCGGTGGCGAAGGCCTTCGCCGGCCGGGAAGCCGACATGCGCAGCCTGCTGAGCCAGATCGACGA
GTTCATCGCGCACACCAACGAGCAGACCGACGACATCATCGCCGCCGCCGAGAATCTCAATGCCCTGGCCGGTCAGGTCG
CCGCCGCCGACCCGGTGGTGGACAAGGCGTTGACGTCGGTGCCCAAAGCGCTTGCCGTGCTGGCGCAAGAGCGCACCAAG
ATCGCCGACACCATCGACCGGGTCGGCAAGTTCAGCGCGATCGCGGCCGACACCATCCACCAGAGCAAGCAATCCCTGGT
GGACAACCTGCGCAACATCGCGCCGGCGCTGCGGTCGCTGGCCGACGCCGGACCCTCGCTGACCCGCGGCCTGGACGGCC
TGGCGACTTACCCCTGGCCGGCGTCGACGGTGCGGAACTGGTTCCGCGGCGACTACGCCAACCTCACCTTGATCGTCGAC
TTGACGCTGAGTCGCATCGACCAAGGGCTTTTCACCGGCTCGCGCTGGGAAGGCAACCTCACCCAGCTCGAACTGCAGTG
GGGTCGGACCATCGGCATGCAGCCCAGTCCCGTCACCGGCGGCAACCCGCTGACCTATCCGTACCATTTCGGGGGATACT
GA

Upstream 100 bases:

>100_bases
CGCCCGCCGATCAGCCGCCCGCCGAACCCGGCCCGCCACCGAACCCGACGAGCAACTCGCTGCAGGTGCTGCGGGACCTG
ATGCTGCCGACGGGGCCGTC

Downstream 100 bases:

>100_bases
TGCTTCGGTTGAACCGCCGGACCTGGATCCAGTTGTCGATTCTGGCGCTGGTGACCGTTGTTTCCTGCGGCGCAATGGCA
TTCAACTTCATGAAGCTGCC

Product: LprM

Products: NA

Alternate protein names: Mce Family Protein; Secreted Protein; MCE Family Protein; Mce Family Lipoe; MCE Family Lipoprotein LprM; LprM Protein; MCE-Family Lipoprotein LprL; MCE Family Lipoprotein LprN; MCE Family Lipoprotein; MCE Family Lipoprotein LprK; Mce-Related Protein; MCE-Family Protein LprN; MCE-Family LipoE; Fis Family Transcriptional Regulator; Lipoprotein

Number of amino acids: Translated: 373; Mature: 373

Protein sequence:

>373_residues
MRRAVVAALVVACAAALSGCGWRGLNSLRLPGTAGGGPGSYTIQAQMPDVVTIQENTRVRVDDVNVGNVTKIELQDWHAL
VTMRIDGDVHLPANSTAKLGQTSLLGSMHIELAPPKGEPPVGRLTAGSVIPLSRASLYPTTEQTLASVSILLNGGGIGQL
QEITQAVAKAFAGREADMRSLLSQIDEFIAHTNEQTDDIIAAAENLNALAGQVAAADPVVDKALTSVPKALAVLAQERTK
IADTIDRVGKFSAIAADTIHQSKQSLVDNLRNIAPALRSLADAGPSLTRGLDGLATYPWPASTVRNWFRGDYANLTLIVD
LTLSRIDQGLFTGSRWEGNLTQLELQWGRTIGMQPSPVTGGNPLTYPYHFGGY

Sequences:

>Translated_373_residues
MRRAVVAALVVACAAALSGCGWRGLNSLRLPGTAGGGPGSYTIQAQMPDVVTIQENTRVRVDDVNVGNVTKIELQDWHAL
VTMRIDGDVHLPANSTAKLGQTSLLGSMHIELAPPKGEPPVGRLTAGSVIPLSRASLYPTTEQTLASVSILLNGGGIGQL
QEITQAVAKAFAGREADMRSLLSQIDEFIAHTNEQTDDIIAAAENLNALAGQVAAADPVVDKALTSVPKALAVLAQERTK
IADTIDRVGKFSAIAADTIHQSKQSLVDNLRNIAPALRSLADAGPSLTRGLDGLATYPWPASTVRNWFRGDYANLTLIVD
LTLSRIDQGLFTGSRWEGNLTQLELQWGRTIGMQPSPVTGGNPLTYPYHFGGY
>Mature_373_residues
MRRAVVAALVVACAAALSGCGWRGLNSLRLPGTAGGGPGSYTIQAQMPDVVTIQENTRVRVDDVNVGNVTKIELQDWHAL
VTMRIDGDVHLPANSTAKLGQTSLLGSMHIELAPPKGEPPVGRLTAGSVIPLSRASLYPTTEQTLASVSILLNGGGIGQL
QEITQAVAKAFAGREADMRSLLSQIDEFIAHTNEQTDDIIAAAENLNALAGQVAAADPVVDKALTSVPKALAVLAQERTK
IADTIDRVGKFSAIAADTIHQSKQSLVDNLRNIAPALRSLADAGPSLTRGLDGLATYPWPASTVRNWFRGDYANLTLIVD
LTLSRIDQGLFTGSRWEGNLTQLELQWGRTIGMQPSPVTGGNPLTYPYHFGGY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39530; Mature: 39530

Theoretical pI: Translated: 6.25; Mature: 6.25

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRAVVAALVVACAAALSGCGWRGLNSLRLPGTAGGGPGSYTIQAQMPDVVTIQENTRVR
CCHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCCCCCEEEEEECCCEEEEECCCEEE
VDDVNVGNVTKIELQDWHALVTMRIDGDVHLPANSTAKLGQTSLLGSMHIELAPPKGEPP
EEECCCCCEEEEEEECCEEEEEEEECCCEECCCCCCHHCCHHHHHEEEEEEECCCCCCCC
VGRLTAGSVIPLSRASLYPTTEQTLASVSILLNGGGIGQLQEITQAVAKAFAGREADMRS
CCCCCCCCCCCCCCCCCCCCHHHHHHEEEEEEECCCCCHHHHHHHHHHHHHCCCHHHHHH
LLSQIDEFIAHTNEQTDDIIAAAENLNALAGQVAAADPVVDKALTSVPKALAVLAQERTK
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
IADTIDRVGKFSAIAADTIHQSKQSLVDNLRNIAPALRSLADAGPSLTRGLDGLATYPWP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCC
ASTVRNWFRGDYANLTLIVDLTLSRIDQGLFTGSRWEGNLTQLELQWGRTIGMQPSPVTG
HHHHHHHHCCCCCCEEEEEEEHHHHHHHHHCCCCCCCCCCEEEEEEECCEECCCCCCCCC
GNPLTYPYHFGGY
CCCCCCCCCCCCC
>Mature Secondary Structure
MRRAVVAALVVACAAALSGCGWRGLNSLRLPGTAGGGPGSYTIQAQMPDVVTIQENTRVR
CCHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCCCCCEEEEEECCCEEEEECCCEEE
VDDVNVGNVTKIELQDWHALVTMRIDGDVHLPANSTAKLGQTSLLGSMHIELAPPKGEPP
EEECCCCCEEEEEEECCEEEEEEEECCCEECCCCCCHHCCHHHHHEEEEEEECCCCCCCC
VGRLTAGSVIPLSRASLYPTTEQTLASVSILLNGGGIGQLQEITQAVAKAFAGREADMRS
CCCCCCCCCCCCCCCCCCCCHHHHHHEEEEEEECCCCCHHHHHHHHHHHHHCCCHHHHHH
LLSQIDEFIAHTNEQTDDIIAAAENLNALAGQVAAADPVVDKALTSVPKALAVLAQERTK
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
IADTIDRVGKFSAIAADTIHQSKQSLVDNLRNIAPALRSLADAGPSLTRGLDGLATYPWP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCC
ASTVRNWFRGDYANLTLIVDLTLSRIDQGLFTGSRWEGNLTQLELQWGRTIGMQPSPVTG
HHHHHHHHCCCCCCEEEEEEEHHHHHHHHHCCCCCCCCCCEEEEEEECCEECCCCCCCCC
GNPLTYPYHFGGY
CCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA