| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is lprM
Identifier: 41408210
GI number: 41408210
Start: 2337773
End: 2338894
Strand: Reverse
Name: lprM
Synonym: MAP2112c
Alternate gene names: NA
Gene position: 2338894-2337773 (Counterclockwise)
Preceding gene: 41408211
Following gene: 41408209
Centisome position: 48.43
GC content: 67.29
Gene sequence:
>1122_bases ATGAGACGCGCGGTCGTCGCAGCACTCGTGGTAGCTTGCGCGGCAGCGCTTTCCGGGTGCGGCTGGCGTGGCTTGAATTC GCTGCGGCTGCCCGGCACCGCGGGCGGGGGACCGGGCTCCTATACCATCCAGGCGCAGATGCCCGATGTGGTGACCATCC AGGAAAACACCCGCGTCCGGGTGGACGACGTCAACGTCGGCAACGTCACCAAGATCGAACTGCAGGACTGGCACGCCCTG GTCACCATGCGCATCGACGGTGACGTGCACCTGCCGGCCAACTCGACCGCCAAGCTCGGCCAGACCAGCCTGCTCGGGTC GATGCACATCGAACTCGCACCACCCAAAGGCGAGCCGCCCGTCGGCCGGCTCACGGCCGGCTCGGTCATCCCGTTGTCGC GGGCGAGCCTGTATCCCACCACCGAGCAGACGCTGGCCTCGGTGTCGATTCTGCTCAACGGTGGCGGAATCGGGCAGCTG CAGGAGATCACCCAGGCGGTGGCGAAGGCCTTCGCCGGCCGGGAAGCCGACATGCGCAGCCTGCTGAGCCAGATCGACGA GTTCATCGCGCACACCAACGAGCAGACCGACGACATCATCGCCGCCGCCGAGAATCTCAATGCCCTGGCCGGTCAGGTCG CCGCCGCCGACCCGGTGGTGGACAAGGCGTTGACGTCGGTGCCCAAAGCGCTTGCCGTGCTGGCGCAAGAGCGCACCAAG ATCGCCGACACCATCGACCGGGTCGGCAAGTTCAGCGCGATCGCGGCCGACACCATCCACCAGAGCAAGCAATCCCTGGT GGACAACCTGCGCAACATCGCGCCGGCGCTGCGGTCGCTGGCCGACGCCGGACCCTCGCTGACCCGCGGCCTGGACGGCC TGGCGACTTACCCCTGGCCGGCGTCGACGGTGCGGAACTGGTTCCGCGGCGACTACGCCAACCTCACCTTGATCGTCGAC TTGACGCTGAGTCGCATCGACCAAGGGCTTTTCACCGGCTCGCGCTGGGAAGGCAACCTCACCCAGCTCGAACTGCAGTG GGGTCGGACCATCGGCATGCAGCCCAGTCCCGTCACCGGCGGCAACCCGCTGACCTATCCGTACCATTTCGGGGGATACT GA
Upstream 100 bases:
>100_bases CGCCCGCCGATCAGCCGCCCGCCGAACCCGGCCCGCCACCGAACCCGACGAGCAACTCGCTGCAGGTGCTGCGGGACCTG ATGCTGCCGACGGGGCCGTC
Downstream 100 bases:
>100_bases TGCTTCGGTTGAACCGCCGGACCTGGATCCAGTTGTCGATTCTGGCGCTGGTGACCGTTGTTTCCTGCGGCGCAATGGCA TTCAACTTCATGAAGCTGCC
Product: LprM
Products: NA
Alternate protein names: Mce Family Protein; Secreted Protein; MCE Family Protein; Mce Family Lipoe; MCE Family Lipoprotein LprM; LprM Protein; MCE-Family Lipoprotein LprL; MCE Family Lipoprotein LprN; MCE Family Lipoprotein; MCE Family Lipoprotein LprK; Mce-Related Protein; MCE-Family Protein LprN; MCE-Family LipoE; Fis Family Transcriptional Regulator; Lipoprotein
Number of amino acids: Translated: 373; Mature: 373
Protein sequence:
>373_residues MRRAVVAALVVACAAALSGCGWRGLNSLRLPGTAGGGPGSYTIQAQMPDVVTIQENTRVRVDDVNVGNVTKIELQDWHAL VTMRIDGDVHLPANSTAKLGQTSLLGSMHIELAPPKGEPPVGRLTAGSVIPLSRASLYPTTEQTLASVSILLNGGGIGQL QEITQAVAKAFAGREADMRSLLSQIDEFIAHTNEQTDDIIAAAENLNALAGQVAAADPVVDKALTSVPKALAVLAQERTK IADTIDRVGKFSAIAADTIHQSKQSLVDNLRNIAPALRSLADAGPSLTRGLDGLATYPWPASTVRNWFRGDYANLTLIVD LTLSRIDQGLFTGSRWEGNLTQLELQWGRTIGMQPSPVTGGNPLTYPYHFGGY
Sequences:
>Translated_373_residues MRRAVVAALVVACAAALSGCGWRGLNSLRLPGTAGGGPGSYTIQAQMPDVVTIQENTRVRVDDVNVGNVTKIELQDWHAL VTMRIDGDVHLPANSTAKLGQTSLLGSMHIELAPPKGEPPVGRLTAGSVIPLSRASLYPTTEQTLASVSILLNGGGIGQL QEITQAVAKAFAGREADMRSLLSQIDEFIAHTNEQTDDIIAAAENLNALAGQVAAADPVVDKALTSVPKALAVLAQERTK IADTIDRVGKFSAIAADTIHQSKQSLVDNLRNIAPALRSLADAGPSLTRGLDGLATYPWPASTVRNWFRGDYANLTLIVD LTLSRIDQGLFTGSRWEGNLTQLELQWGRTIGMQPSPVTGGNPLTYPYHFGGY >Mature_373_residues MRRAVVAALVVACAAALSGCGWRGLNSLRLPGTAGGGPGSYTIQAQMPDVVTIQENTRVRVDDVNVGNVTKIELQDWHAL VTMRIDGDVHLPANSTAKLGQTSLLGSMHIELAPPKGEPPVGRLTAGSVIPLSRASLYPTTEQTLASVSILLNGGGIGQL QEITQAVAKAFAGREADMRSLLSQIDEFIAHTNEQTDDIIAAAENLNALAGQVAAADPVVDKALTSVPKALAVLAQERTK IADTIDRVGKFSAIAADTIHQSKQSLVDNLRNIAPALRSLADAGPSLTRGLDGLATYPWPASTVRNWFRGDYANLTLIVD LTLSRIDQGLFTGSRWEGNLTQLELQWGRTIGMQPSPVTGGNPLTYPYHFGGY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39530; Mature: 39530
Theoretical pI: Translated: 6.25; Mature: 6.25
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRAVVAALVVACAAALSGCGWRGLNSLRLPGTAGGGPGSYTIQAQMPDVVTIQENTRVR CCHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCCCCCEEEEEECCCEEEEECCCEEE VDDVNVGNVTKIELQDWHALVTMRIDGDVHLPANSTAKLGQTSLLGSMHIELAPPKGEPP EEECCCCCEEEEEEECCEEEEEEEECCCEECCCCCCHHCCHHHHHEEEEEEECCCCCCCC VGRLTAGSVIPLSRASLYPTTEQTLASVSILLNGGGIGQLQEITQAVAKAFAGREADMRS CCCCCCCCCCCCCCCCCCCCHHHHHHEEEEEEECCCCCHHHHHHHHHHHHHCCCHHHHHH LLSQIDEFIAHTNEQTDDIIAAAENLNALAGQVAAADPVVDKALTSVPKALAVLAQERTK HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH IADTIDRVGKFSAIAADTIHQSKQSLVDNLRNIAPALRSLADAGPSLTRGLDGLATYPWP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCC ASTVRNWFRGDYANLTLIVDLTLSRIDQGLFTGSRWEGNLTQLELQWGRTIGMQPSPVTG HHHHHHHHCCCCCCEEEEEEEHHHHHHHHHCCCCCCCCCCEEEEEEECCEECCCCCCCCC GNPLTYPYHFGGY CCCCCCCCCCCCC >Mature Secondary Structure MRRAVVAALVVACAAALSGCGWRGLNSLRLPGTAGGGPGSYTIQAQMPDVVTIQENTRVR CCHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCCCCCEEEEEECCCEEEEECCCEEE VDDVNVGNVTKIELQDWHALVTMRIDGDVHLPANSTAKLGQTSLLGSMHIELAPPKGEPP EEECCCCCEEEEEEECCEEEEEEEECCCEECCCCCCHHCCHHHHHEEEEEEECCCCCCCC VGRLTAGSVIPLSRASLYPTTEQTLASVSILLNGGGIGQLQEITQAVAKAFAGREADMRS CCCCCCCCCCCCCCCCCCCCHHHHHHEEEEEEECCCCCHHHHHHHHHHHHHCCCHHHHHH LLSQIDEFIAHTNEQTDDIIAAAENLNALAGQVAAADPVVDKALTSVPKALAVLAQERTK HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH IADTIDRVGKFSAIAADTIHQSKQSLVDNLRNIAPALRSLADAGPSLTRGLDGLATYPWP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCC ASTVRNWFRGDYANLTLIVDLTLSRIDQGLFTGSRWEGNLTQLELQWGRTIGMQPSPVTG HHHHHHHHCCCCCCEEEEEEEHHHHHHHHHCCCCCCCCCCEEEEEEECCEECCCCCCCCC GNPLTYPYHFGGY CCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA