| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41408205
Identifier: 41408205
GI number: 41408205
Start: 2333654
End: 2333845
Strand: Reverse
Name: 41408205
Synonym: MAP2107c
Alternate gene names: NA
Gene position: 2333845-2333654 (Counterclockwise)
Preceding gene: 41408207
Following gene: 41408204
Centisome position: 48.32
GC content: 65.62
Gene sequence:
>192_bases ATGTCGTCCGCGGCAAGGGTCAACGCGGCGGCATCGGTCTCGGTCGCCGAAAACCACGCGGTGGCTTTGGTTTTCGTCGA CCAAACCGTCACCATCGGCGACGGCGCCCCCACCGACACCCAGCCCGTCGTCCGGATGACCTTGGACAAGGTCAACGGCC GCTGGTTGGTGTCCCGCTTCGAACCGGTGTGA
Upstream 100 bases:
>100_bases CAACACAGCAACCACATGAAAGCCATACCCGACGTCCCTGGGCAATTCGAAGCCTAAGGCCGACGGCCCCGAACACCCTT CAAGAAAGGTAAGGAAACAC
Downstream 100 bases:
>100_bases GGCGTGTCGGTATCGGTGAGCCGCGCCGCCCGCCTGATGGCGGGCGCGGTCGTCGTGTCGGCGGCGCTGCCGGTGCCCGC CGCGCACGCCGACAACAAGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 63; Mature: 62
Protein sequence:
>63_residues MSSAARVNAAASVSVAENHAVALVFVDQTVTIGDGAPTDTQPVVRMTLDKVNGRWLVSRFEPV
Sequences:
>Translated_63_residues MSSAARVNAAASVSVAENHAVALVFVDQTVTIGDGAPTDTQPVVRMTLDKVNGRWLVSRFEPV >Mature_62_residues SSAARVNAAASVSVAENHAVALVFVDQTVTIGDGAPTDTQPVVRMTLDKVNGRWLVSRFEPV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6654; Mature: 6522
Theoretical pI: Translated: 5.67; Mature: 5.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSAARVNAAASVSVAENHAVALVFVDQTVTIGDGAPTDTQPVVRMTLDKVNGRWLVSRF CCCCCCCCCEEEEEECCCCEEEEEEECCEEEECCCCCCCCCCEEEEEEECCCCEEEEEEC EPV CCC >Mature Secondary Structure SSAARVNAAASVSVAENHAVALVFVDQTVTIGDGAPTDTQPVVRMTLDKVNGRWLVSRF CCCCCCCCEEEEEECCCCEEEEEEECCEEEECCCCCCCCCCEEEEEEECCCCEEEEEEC EPV CCC
PDB accession: NA
Resolution: NA
Structure class: Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA