Definition Mycobacterium avium subsp. paratuberculosis K-10, complete genome.
Accession NC_002944
Length 4,829,781

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The map label for this gene is 41408204

Identifier: 41408204

GI number: 41408204

Start: 2333150

End: 2333617

Strand: Reverse

Name: 41408204

Synonym: MAP2106c

Alternate gene names: NA

Gene position: 2333617-2333150 (Counterclockwise)

Preceding gene: 41408205

Following gene: 41408201

Centisome position: 48.32

GC content: 68.16

Gene sequence:

>468_bases
ATGGCGGGCGCGGTCGTCGTGTCGGCGGCGCTGCCGGTGCCCGCCGCGCACGCCGACAACAAGCGGCTCAACAGCGCCGT
CGTCTCCGCCGTCTACACCCTGCAGCACCAGGCGGGCTGCACCAACGACGTGGTCAGGAACAACGCACTCACCCTGGCCG
CCGAATGGCACGCCGAAGACATGATCAACAACCGAAACATCAACGACGACATCGGTTCCGACGGATCGACGCCGCAGGAC
CGGGCCAATGCCGCCGGCTTTCGCGGCAGGGCCGCCGAGACGGTGGCCATCAACCCGGCGATGGCGATCAGCAGCCTCGA
GCTGGTCAACCAGTGGTATGCCAACCCGGACGACATGGCGATCATCCGGGACTGCGCCAACACCTCCATCGGGGTGTGGT
CGGACAACAGCCTGGACCGCACCGTCGTGGTCGCCGTCTACGGCCAGCCCGATCCGGCCCGGCGGTAG

Upstream 100 bases:

>100_bases
CGTCCGGATGACCTTGGACAAGGTCAACGGCCGCTGGTTGGTGTCCCGCTTCGAACCGGTGTGAGGCGTGTCGGTATCGG
TGAGCCGCGCCGCCCGCCTG

Downstream 100 bases:

>100_bases
CGGCGCGATCGGTGGCGGCTACCCGCTGGAAATGGACTCGCTCGCCAGCTCGCACACGCACACCTGGCCGCCGCGCCGCC
AGGTGCCGAACTGTGTTCCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 155; Mature: 154

Protein sequence:

>155_residues
MAGAVVVSAALPVPAAHADNKRLNSAVVSAVYTLQHQAGCTNDVVRNNALTLAAEWHAEDMINNRNINDDIGSDGSTPQD
RANAAGFRGRAAETVAINPAMAISSLELVNQWYANPDDMAIIRDCANTSIGVWSDNSLDRTVVVAVYGQPDPARR

Sequences:

>Translated_155_residues
MAGAVVVSAALPVPAAHADNKRLNSAVVSAVYTLQHQAGCTNDVVRNNALTLAAEWHAEDMINNRNINDDIGSDGSTPQD
RANAAGFRGRAAETVAINPAMAISSLELVNQWYANPDDMAIIRDCANTSIGVWSDNSLDRTVVVAVYGQPDPARR
>Mature_154_residues
AGAVVVSAALPVPAAHADNKRLNSAVVSAVYTLQHQAGCTNDVVRNNALTLAAEWHAEDMINNRNINDDIGSDGSTPQDR
ANAAGFRGRAAETVAINPAMAISSLELVNQWYANPDDMAIIRDCANTSIGVWSDNSLDRTVVVAVYGQPDPARR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16441; Mature: 16310

Theoretical pI: Translated: 4.63; Mature: 4.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGAVVVSAALPVPAAHADNKRLNSAVVSAVYTLQHQAGCTNDVVRNNALTLAAEWHAED
CCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHCCCCEEEEECCCHHH
MINNRNINDDIGSDGSTPQDRANAAGFRGRAAETVAINPAMAISSLELVNQWYANPDDMA
HHCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCEEEECCHHHHHHHHHHHHHCCCCCCHH
IIRDCANTSIGVWSDNSLDRTVVVAVYGQPDPARR
HHHHHCCCEEEEECCCCCCCEEEEEEECCCCCCCC
>Mature Secondary Structure 
AGAVVVSAALPVPAAHADNKRLNSAVVSAVYTLQHQAGCTNDVVRNNALTLAAEWHAED
CCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHCCCCEEEEECCCHHH
MINNRNINDDIGSDGSTPQDRANAAGFRGRAAETVAINPAMAISSLELVNQWYANPDDMA
HHCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCEEEECCHHHHHHHHHHHHHCCCCCCHH
IIRDCANTSIGVWSDNSLDRTVVVAVYGQPDPARR
HHHHHCCCEEEEECCCCCCCEEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA