Definition Mycobacterium avium subsp. paratuberculosis K-10, complete genome.
Accession NC_002944
Length 4,829,781

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The map label for this gene is 41408181

Identifier: 41408181

GI number: 41408181

Start: 2302391

End: 2303305

Strand: Reverse

Name: 41408181

Synonym: MAP2083c

Alternate gene names: NA

Gene position: 2303305-2302391 (Counterclockwise)

Preceding gene: 41408184

Following gene: 41408176

Centisome position: 47.69

GC content: 68.96

Gene sequence:

>915_bases
ATGCGGGTTGTTCGCCTGTTCGCTGCGGTCCTGACCATCCTCACAGCCGGGCTGCTGTGGGCGACCCCGGCCGGCGCGCA
ACCGCCGACCAAGCTCACCGATCACCTCACCGACAGCAACCGGGTGCTGACGGATTCGGATCGGGCGGCGGTCAGCTCGG
CCATCGACCGGCTGTACCGCGATCGACACATCCAACTGTGGGTGGTCTACGTCGACAACTTCAACAAGTTCAAACCCGAC
AACTGGGCCGACCGCACCCGCAGCGAAAGCGGCATGGGCGACCGCGACGTGCTGCTGGCCGTGGCCACCAACACCAAGTT
GTTCACACTCAACCCCCCGCCGCAGCTGCAGAACCCGACAGCCGACGAGTTGAATAGCCTGCGCACCAACAAGATTGGGC
CGGCAGTCAGTGCGAAGAACTGGGCCATCGCCGCCATCGCCGCGGCCGATGGTCTGGACACTTCACCCAGCGTGTCTCAT
CCCGCGAGCCCGGCCAAGCGGGCCTGGCTGCCGATCGCGATCGCTGTCATCGCCGTCGTGGTCGTCGTCGTGCTGCTGCT
GGTGCTCTATCGGGCGCGGCGCCGCCGGCGCGCCGCTCGCGGAGTCGGCCCCGGCGGTCCGCAGGATCGTTCGTTGGGGG
AGGCGTTGTCGACGGCCGAGGCCAGGTTGCGCCAAATCTCCGACTACGTCGCCCGGCATCACGACAGCGTCGGCGCCGAC
GCCCGCAGCCGCCTCGACGAGGCCACCCGGCACCTGGCGGCCGCGCGCGCCAAGCAGGCAAGCAACGACACCGAGGCGAT
CGCCCATGCCAACCGGGCATCGACGTTGGCGGCAGAGGCGCAACACCTGGCGAACGACGACGTGCTGGGCGCCCACCGCA
CGACGCGACGCCGGGGTGCCGCATCCAAGCGATGA

Upstream 100 bases:

>100_bases
TCCGGACGGATCCTGCAGGTCACCCGCGTGCCGAAACGGATGCGCCGGCCGCGCCCCGGCAGGTGGAGCCCCGCCGCAAA
ATGGCGGCTAGATTACCCCT

Downstream 100 bases:

>100_bases
CCTGAACCGTCGAACGTGGAGTTGTTGCGGAAAATCGGCCGGATCCGCGCAACAACCCCACGTTCGGCGTCACGACGAAC
GGTAGCGAGCACGCAGCAGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 304; Mature: 304

Protein sequence:

>304_residues
MRVVRLFAAVLTILTAGLLWATPAGAQPPTKLTDHLTDSNRVLTDSDRAAVSSAIDRLYRDRHIQLWVVYVDNFNKFKPD
NWADRTRSESGMGDRDVLLAVATNTKLFTLNPPPQLQNPTADELNSLRTNKIGPAVSAKNWAIAAIAAADGLDTSPSVSH
PASPAKRAWLPIAIAVIAVVVVVVLLLVLYRARRRRRAARGVGPGGPQDRSLGEALSTAEARLRQISDYVARHHDSVGAD
ARSRLDEATRHLAAARAKQASNDTEAIAHANRASTLAAEAQHLANDDVLGAHRTTRRRGAASKR

Sequences:

>Translated_304_residues
MRVVRLFAAVLTILTAGLLWATPAGAQPPTKLTDHLTDSNRVLTDSDRAAVSSAIDRLYRDRHIQLWVVYVDNFNKFKPD
NWADRTRSESGMGDRDVLLAVATNTKLFTLNPPPQLQNPTADELNSLRTNKIGPAVSAKNWAIAAIAAADGLDTSPSVSH
PASPAKRAWLPIAIAVIAVVVVVVLLLVLYRARRRRRAARGVGPGGPQDRSLGEALSTAEARLRQISDYVARHHDSVGAD
ARSRLDEATRHLAAARAKQASNDTEAIAHANRASTLAAEAQHLANDDVLGAHRTTRRRGAASKR
>Mature_304_residues
MRVVRLFAAVLTILTAGLLWATPAGAQPPTKLTDHLTDSNRVLTDSDRAAVSSAIDRLYRDRHIQLWVVYVDNFNKFKPD
NWADRTRSESGMGDRDVLLAVATNTKLFTLNPPPQLQNPTADELNSLRTNKIGPAVSAKNWAIAAIAAADGLDTSPSVSH
PASPAKRAWLPIAIAVIAVVVVVVLLLVLYRARRRRRAARGVGPGGPQDRSLGEALSTAEARLRQISDYVARHHDSVGAD
ARSRLDEATRHLAAARAKQASNDTEAIAHANRASTLAAEAQHLANDDVLGAHRTTRRRGAASKR

Specific function: May play a role in septum formation [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0603 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007621 [H]

Pfam domain/function: PF04536 DUF477 [H]

EC number: NA

Molecular weight: Translated: 32858; Mature: 32858

Theoretical pI: Translated: 11.23; Mature: 11.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
0.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVVRLFAAVLTILTAGLLWATPAGAQPPTKLTDHLTDSNRVLTDSDRAAVSSAIDRLYR
CHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCEECCCHHHHHHHHHHHHHH
DRHIQLWVVYVDNFNKFKPDNWADRTRSESGMGDRDVLLAVATNTKLFTLNPPPQLQNPT
CCCEEEEEEEECCCCCCCCCCHHHHHCCCCCCCCCEEEEEEECCCEEEEECCCCCCCCCC
ADELNSLRTNKIGPAVSAKNWAIAAIAAADGLDTSPSVSHPASPAKRAWLPIAIAVIAVV
HHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
VVVVLLLVLYRARRRRRAARGVGPGGPQDRSLGEALSTAEARLRQISDYVARHHDSVGAD
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
ARSRLDEATRHLAAARAKQASNDTEAIAHANRASTLAAEAQHLANDDVLGAHRTTRRRGA
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCC
ASKR
CCCC
>Mature Secondary Structure
MRVVRLFAAVLTILTAGLLWATPAGAQPPTKLTDHLTDSNRVLTDSDRAAVSSAIDRLYR
CHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCEECCCHHHHHHHHHHHHHH
DRHIQLWVVYVDNFNKFKPDNWADRTRSESGMGDRDVLLAVATNTKLFTLNPPPQLQNPT
CCCEEEEEEEECCCCCCCCCCHHHHHCCCCCCCCCEEEEEEECCCEEEEECCCCCCCCCC
ADELNSLRTNKIGPAVSAKNWAIAAIAAADGLDTSPSVSHPASPAKRAWLPIAIAVIAVV
HHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
VVVVLLLVLYRARRRRRAARGVGPGGPQDRSLGEALSTAEARLRQISDYVARHHDSVGAD
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
ARSRLDEATRHLAAARAKQASNDTEAIAHANRASTLAAEAQHLANDDVLGAHRTTRRRGA
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCC
ASKR
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]