| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is malY [C]
Identifier: 41408153
GI number: 41408153
Start: 2263776
End: 2264981
Strand: Direct
Name: malY [C]
Synonym: MAP2055
Alternate gene names: 41408153
Gene position: 2263776-2264981 (Clockwise)
Preceding gene: 41408151
Following gene: 41408155
Centisome position: 46.87
GC content: 70.65
Gene sequence:
>1206_bases GTGACGTTTAACCCGTTCGAGGAACTCACGCTGGACCAACTGCGGCTTCGCACCAGCATGAAATGGCGTGCCCATCCCGC CGACGTGCTGCCGCTGTGGGTCGCCGAGATGGACGTCAGGCTGGCGCCGACGGTGGCGCAGGCGCTGCGAACGGCGATCG ACAACGGCGACACCGGCTACCCCTGCGGCACCGCGTTCGCCGAGGCGGTGAGCGAATTCGCGGCGCGGCGTTGGCAGTGG CACGACCTCGACGTGCGCCGCACCGCGCTGGTTCCCGACGTCATGCTCGGCGCCGTCGAGGTGCTGCGCCTGGTCACCGA CCCGGGCGACGCCGTCGTCGTCAACCCGCCGGTGTACGCGCCGTTCTACGCATTCGTGTCGCACGACGGCCGCCGGGTCG TCGAGGCACCGCTAGGCGACGGCGGCCGAATTGACTTGGGCGCGTTGGAAGAAGCGTTCGCACACGCCCGCTCCGGGAAC ACGGCGAAGGTCGCCTACCTGTTGTGCAATCCGCACAACCCGACCGGGTCGGTGCACACCGCCGCGGAGCTGCGCGGAGT TGCCGAGCTCGCCCGCCGGTTCGGCGTGCGCGTGGTGTCGGACGAGATCCACGCGCCGGTGATCTTGCCGGGATCACGAT TCACCCCCTTCCTGACCGTGGCCGGGGCGGAGAACGCCTTCGCGCTGACCTCGGCATCCAAGGCCTGGAACCTGTCCGGC CTGAAGGCGGCCCTGGCCATCGCCGGACCGGAGGCGGCGGCCGACCTGAACCGGATGCCGGAGGAGGTCAGTCACGGGCC CAGCCATCTCGGCGTCATCGCCCACACCGAGGCATTCCGCAGCGGTGACGGATGGCTGGACGCCACGCTGCAGGGCCTGG ACCAGAACCGCGCGTTGCTCGGCGAGCTGGTGGCCGAACATCTTCCGGGCGTGAAATATCAATGGCCGCAAGGCACTTAC CTCGCGTGGCTGGACTGCCGAGAGCTGGGCTTCGCCGAGGACGCCGCACAGGGCCTGGCCGTGGTCGCCGACCTGTCCGG GCCCGCGCGCTGGTTCCTCGAGCACGCCCGGGTGGCGCTGAGCTCCGGCCACGTGTTCGGAACCGGCGGGGCTGGACACC TGCGACTGAACTTCGCCACCTCGCGCGCGATCCTCACCGAGGCGCTGTCGCGCATGGGCCGCGCGCTGGCCGGCCGGTCC GGCTAG
Upstream 100 bases:
>100_bases AAGGCGTAAAGCGGCAGCGTGGTCGGGATCTCTAGCGAGCACGGCAGCCGGGGTACGGCCGCGACCACGTTCGCTCACTG AACTGCCTTAATCTGCCCGA
Downstream 100 bases:
>100_bases CCCCGCCCGCGCTACGCGGGAATCTCCTCCCCGCCCCGGCCCAAGTTGCGGAACCCTTCCGCGGGCTCCTTCATGCCCAG GGTGAACGGCAGCGAGTTGA
Product: hypothetical protein
Products: NA
Alternate protein names: CBL; Beta-cystathionase; Cysteine lyase [H]
Number of amino acids: Translated: 401; Mature: 400
Protein sequence:
>401_residues MTFNPFEELTLDQLRLRTSMKWRAHPADVLPLWVAEMDVRLAPTVAQALRTAIDNGDTGYPCGTAFAEAVSEFAARRWQW HDLDVRRTALVPDVMLGAVEVLRLVTDPGDAVVVNPPVYAPFYAFVSHDGRRVVEAPLGDGGRIDLGALEEAFAHARSGN TAKVAYLLCNPHNPTGSVHTAAELRGVAELARRFGVRVVSDEIHAPVILPGSRFTPFLTVAGAENAFALTSASKAWNLSG LKAALAIAGPEAAADLNRMPEEVSHGPSHLGVIAHTEAFRSGDGWLDATLQGLDQNRALLGELVAEHLPGVKYQWPQGTY LAWLDCRELGFAEDAAQGLAVVADLSGPARWFLEHARVALSSGHVFGTGGAGHLRLNFATSRAILTEALSRMGRALAGRS G
Sequences:
>Translated_401_residues MTFNPFEELTLDQLRLRTSMKWRAHPADVLPLWVAEMDVRLAPTVAQALRTAIDNGDTGYPCGTAFAEAVSEFAARRWQW HDLDVRRTALVPDVMLGAVEVLRLVTDPGDAVVVNPPVYAPFYAFVSHDGRRVVEAPLGDGGRIDLGALEEAFAHARSGN TAKVAYLLCNPHNPTGSVHTAAELRGVAELARRFGVRVVSDEIHAPVILPGSRFTPFLTVAGAENAFALTSASKAWNLSG LKAALAIAGPEAAADLNRMPEEVSHGPSHLGVIAHTEAFRSGDGWLDATLQGLDQNRALLGELVAEHLPGVKYQWPQGTY LAWLDCRELGFAEDAAQGLAVVADLSGPARWFLEHARVALSSGHVFGTGGAGHLRLNFATSRAILTEALSRMGRALAGRS G >Mature_400_residues TFNPFEELTLDQLRLRTSMKWRAHPADVLPLWVAEMDVRLAPTVAQALRTAIDNGDTGYPCGTAFAEAVSEFAARRWQWH DLDVRRTALVPDVMLGAVEVLRLVTDPGDAVVVNPPVYAPFYAFVSHDGRRVVEAPLGDGGRIDLGALEEAFAHARSGNT AKVAYLLCNPHNPTGSVHTAAELRGVAELARRFGVRVVSDEIHAPVILPGSRFTPFLTVAGAENAFALTSASKAWNLSGL KAALAIAGPEAAADLNRMPEEVSHGPSHLGVIAHTEAFRSGDGWLDATLQGLDQNRALLGELVAEHLPGVKYQWPQGTYL AWLDCRELGFAEDAAQGLAVVADLSGPARWFLEHARVALSSGHVFGTGGAGHLRLNFATSRAILTEALSRMGRALAGRSG
Specific function: Acts As A Beta-Cystathionase And As A Repressor Of The Maltose Regulon. [C]
COG id: COG1168
COG function: function code E; Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. MalY/PatB cystathionine beta-lyase subfamily [H]
Homologues:
Organism=Escherichia coli, GI1787909, Length=382, Percent_Identity=31.151832460733, Blast_Score=169, Evalue=3e-43,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004839 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 [H]
Pfam domain/function: PF00155 Aminotran_1_2 [H]
EC number: =4.4.1.8 [H]
Molecular weight: Translated: 42951; Mature: 42820
Theoretical pI: Translated: 6.27; Mature: 6.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFNPFEELTLDQLRLRTSMKWRAHPADVLPLWVAEMDVRLAPTVAQALRTAIDNGDTGY CCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCEECHHHHHHHHHHHCCCCCCC PCGTAFAEAVSEFAARRWQWHDLDVRRTALVPDVMLGAVEVLRLVTDPGDAVVVNPPVYA CCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCH PFYAFVSHDGRRVVEAPLGDGGRIDLGALEEAFAHARSGNTAKVAYLLCNPHNPTGSVHT HHHHHHCCCCCEEEECCCCCCCEEEHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCH AAELRGVAELARRFGVRVVSDEIHAPVILPGSRFTPFLTVAGAENAFALTSASKAWNLSG HHHHHHHHHHHHHHCCEEEECCCCCCEEECCCCCCCEEEEECCCCCEEEECCCCCCCCCC LKAALAIAGPEAAADLNRMPEEVSHGPSHLGVIAHTEAFRSGDGWLDATLQGLDQNRALL HHEEEEECCCHHHHHHHHCCHHHCCCCCCEEEEEEHHHHHCCCCHHHHHHHCCCCCHHHH GELVAEHLPGVKYQWPQGTYLAWLDCRELGFAEDAAQGLAVVADLSGPARWFLEHARVAL HHHHHHHCCCCEEECCCCCEEEEEEHHHCCCHHHHHCCEEEEEECCCHHHHHHHHHHHHH SSGHVFGTGGAGHLRLNFATSRAILTEALSRMGRALAGRSG CCCCEEECCCCCEEEEEEHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure TFNPFEELTLDQLRLRTSMKWRAHPADVLPLWVAEMDVRLAPTVAQALRTAIDNGDTGY CCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCEECHHHHHHHHHHHCCCCCCC PCGTAFAEAVSEFAARRWQWHDLDVRRTALVPDVMLGAVEVLRLVTDPGDAVVVNPPVYA CCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCH PFYAFVSHDGRRVVEAPLGDGGRIDLGALEEAFAHARSGNTAKVAYLLCNPHNPTGSVHT HHHHHHCCCCCEEEECCCCCCCEEEHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCH AAELRGVAELARRFGVRVVSDEIHAPVILPGSRFTPFLTVAGAENAFALTSASKAWNLSG HHHHHHHHHHHHHHCCEEEECCCCCCEEECCCCCCCEEEEECCCCCEEEECCCCCCCCCC LKAALAIAGPEAAADLNRMPEEVSHGPSHLGVIAHTEAFRSGDGWLDATLQGLDQNRALL HHEEEEECCCHHHHHHHHCCHHHCCCCCCEEEEEEHHHHHCCCCHHHHHHHCCCCCHHHH GELVAEHLPGVKYQWPQGTYLAWLDCRELGFAEDAAQGLAVVADLSGPARWFLEHARVAL HHHHHHHCCCCEEECCCCCEEEEEEHHHCCCHHHHHCCEEEEEECCCHHHHHHHHHHHHH SSGHVFGTGGAGHLRLNFATSRAILTEALSRMGRALAGRSG CCCCEEECCCCCEEEEEEHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11234002 [H]