Definition Mycobacterium avium subsp. paratuberculosis K-10, complete genome.
Accession NC_002944
Length 4,829,781

Click here to switch to the map view.

The map label for this gene is lppO

Identifier: 41408146

GI number: 41408146

Start: 2256503

End: 2257045

Strand: Direct

Name: lppO

Synonym: MAP2048

Alternate gene names: 41408146

Gene position: 2256503-2257045 (Clockwise)

Preceding gene: 41408145

Following gene: 41408147

Centisome position: 46.72

GC content: 66.48

Gene sequence:

>543_bases
ATGACGTCTAGCGGAGGGCCGACAATGAGGAACCTGAACGATCGGCGCCGGGTCGTCGGCGCCGCGACCGCGCTCGGTGT
GCTGGCGTTGGGGGCCGGGCTGCCCGGGTGTTCCGGCAAGGACGGCCACCCGGCCGCCACCCCGAGTTCCACCGCCACGT
TGGCAAGCACCACCGTGATGATCGACGGGAACAAGCACACCATGATCGCCGGCGTCGACTGCACCAGCGCAGCAGCACAA
CCGAATGCGTCGCCGCCGGAATCGGGAGACCTCACCACCCGCATCAGCGTGCACGACGATTCGGCGTCGGTCTCCCTGGC
GGTCTCCGACGAACAACCGCCCACCGTCGATGGCTTCGCGATTTCGCTCAAGCTCGACAACGGCCAATATCAATTGCCGT
ACCAGGGAACCAAATCGCCGACTCAGGTGCAGGCAACCAAGGACAGCAAGAGCTACACGGTCACCGGCACCGGCCAGGCG
ACCACACCCGGCCAAAGCGGGACGCGCGACGTGACGTTCGGGATCCACGTCACCTGCCCGTGA

Upstream 100 bases:

>100_bases
GCGTCGTGAACACGGGCGCGTTCAACGCCCGTTCGCCCGACCGCCGCACGCCATGATCGGCTGGGCGTCCCGACGGTAAC
GATCGGGCTTTATAGTCCTG

Downstream 100 bases:

>100_bases
GAACGGTGGTTGTCCGCCGCGACGGCCTCTGAGATGCTGACTGCTTGGACATTTTCGCGCAGTGGCAAGGCGGCGGCACC
GAACTTCGTTGGCGCTCGAC

Product: LppO

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 180; Mature: 179

Protein sequence:

>180_residues
MTSSGGPTMRNLNDRRRVVGAATALGVLALGAGLPGCSGKDGHPAATPSSTATLASTTVMIDGNKHTMIAGVDCTSAAAQ
PNASPPESGDLTTRISVHDDSASVSLAVSDEQPPTVDGFAISLKLDNGQYQLPYQGTKSPTQVQATKDSKSYTVTGTGQA
TTPGQSGTRDVTFGIHVTCP

Sequences:

>Translated_180_residues
MTSSGGPTMRNLNDRRRVVGAATALGVLALGAGLPGCSGKDGHPAATPSSTATLASTTVMIDGNKHTMIAGVDCTSAAAQ
PNASPPESGDLTTRISVHDDSASVSLAVSDEQPPTVDGFAISLKLDNGQYQLPYQGTKSPTQVQATKDSKSYTVTGTGQA
TTPGQSGTRDVTFGIHVTCP
>Mature_179_residues
TSSGGPTMRNLNDRRRVVGAATALGVLALGAGLPGCSGKDGHPAATPSSTATLASTTVMIDGNKHTMIAGVDCTSAAAQP
NASPPESGDLTTRISVHDDSASVSLAVSDEQPPTVDGFAISLKLDNGQYQLPYQGTKSPTQVQATKDSKSYTVTGTGQAT
TPGQSGTRDVTFGIHVTCP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18188; Mature: 18057

Theoretical pI: Translated: 6.50; Mature: 6.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSSGGPTMRNLNDRRRVVGAATALGVLALGAGLPGCSGKDGHPAATPSSTATLASTTVM
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEEEE
IDGNKHTMIAGVDCTSAAAQPNASPPESGDLTTRISVHDDSASVSLAVSDEQPPTVDGFA
EECCCEEEEEECCCCCCCCCCCCCCCCCCCEEEEEEEECCCCEEEEEECCCCCCCCCCEE
ISLKLDNGQYQLPYQGTKSPTQVQATKDSKSYTVTGTGQATTPGQSGTRDVTFGIHVTCP
EEEEECCCEEECCCCCCCCCCEEEEECCCCEEEEEECCCCCCCCCCCCEEEEEEEEEECC
>Mature Secondary Structure 
TSSGGPTMRNLNDRRRVVGAATALGVLALGAGLPGCSGKDGHPAATPSSTATLASTTVM
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEEEE
IDGNKHTMIAGVDCTSAAAQPNASPPESGDLTTRISVHDDSASVSLAVSDEQPPTVDGFA
EECCCEEEEEECCCCCCCCCCCCCCCCCCCEEEEEEEECCCCEEEEEECCCCCCCCCCEE
ISLKLDNGQYQLPYQGTKSPTQVQATKDSKSYTVTGTGQATTPGQSGTRDVTFGIHVTCP
EEEEECCCEEECCCCCCCCCCEEEEECCCCEEEEEECCCCCCCCCCCCEEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]