| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41408147
Identifier: 41408147
GI number: 41408147
Start: 2257090
End: 2258079
Strand: Direct
Name: 41408147
Synonym: MAP2049
Alternate gene names: NA
Gene position: 2257090-2258079 (Clockwise)
Preceding gene: 41408146
Following gene: 41408148
Centisome position: 46.73
GC content: 66.87
Gene sequence:
>990_bases TTGGACATTTTCGCGCAGTGGCAAGGCGGCGGCACCGAACTTCGTTGGCGCTCGACCACCGCGGCCAACGACGGCAGGGA AGTCGGGGTGTTCAGCCGACGTTGCGGGACCCCGGGTGCGCCCGCATTGGTGTTGGTGCACGGCTTTCCGACGTCGAGCA TCGACTACTTCGCCTTGGCCGGCGAGCTGAGCCGTGACTTCGACATCCACCTGATCGACTTCCCCGGCTACGGACTGTCC GACAAACCGTCCGAGCCGTACGTGTATTCGCTGTACGACGACGCCCGTCTGCTCGTCCACGCCATCACCGAGGTGTGGCG ACTGTCCGACTACCGCATGCTGACCCACGACCGCGGCAGCAGTGTCGGCATGATCGCGTCGGGCATGCTGGCCGCGCTCG ACCCGCCGGCCGCACCCGTCGACCTGATCCTGACCAACGCCAACATCTACCTTCCGCTGGCCAACCTCACCGCGTTTCAG AGCGCGCTGCTCGATCCCGCGACCGCGCGGGCCACCGCGGCCGCGACCACACCCGAGCTGCTGGCGGCCGGAATGGGCGC CAGCACGTTCATGCCGCGGCGGACGCTGGACGACCCGGAAATCGCCGCCCTGGCGAAATGCTTCGCCCACAACGACGGAA TCCGGGTGCTGCCTGACACCATTCAATATCTCAACGAGCGCGCCGCCGACGAAACCCGTTGGCTGGAAGCACTTTCCACC AGCGATGTCAACACCACCATGGTGTGGGGACTGCACGACAACGTCGCGCCGCTGCGCGTCCCCAACCACGTATGGCAGAC GTATCTGAAGACGAAGCCGGGCCGCAACCGCTACTGGGTGATCCCCGGCGCTGACCACTATCTGCAGTGCGACGCCCCCG CGCAATTGGCCGAGATCGTGCGCCTGACCGCCCGCGGGGAGGACGTGCCGCTGCAAACCCTGGGAGATCGGCCCGACGGC GCGGTGTTGGTGGACGCCAGCGCCAGCTAA
Upstream 100 bases:
>100_bases CCGGCCAAAGCGGGACGCGCGACGTGACGTTCGGGATCCACGTCACCTGCCCGTGAGAACGGTGGTTGTCCGCCGCGACG GCCTCTGAGATGCTGACTGC
Downstream 100 bases:
>100_bases TGGGGATCGAACAGTGAGCCTTCGGCTGTTGATCCCTTGTTCGGGGGACGCTGTTTACCGAGCCGCCGGTCGGTGAGCGT CGTTGCCAGCTGAAGCGATG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 329; Mature: 329
Protein sequence:
>329_residues MDIFAQWQGGGTELRWRSTTAANDGREVGVFSRRCGTPGAPALVLVHGFPTSSIDYFALAGELSRDFDIHLIDFPGYGLS DKPSEPYVYSLYDDARLLVHAITEVWRLSDYRMLTHDRGSSVGMIASGMLAALDPPAAPVDLILTNANIYLPLANLTAFQ SALLDPATARATAAATTPELLAAGMGASTFMPRRTLDDPEIAALAKCFAHNDGIRVLPDTIQYLNERAADETRWLEALST SDVNTTMVWGLHDNVAPLRVPNHVWQTYLKTKPGRNRYWVIPGADHYLQCDAPAQLAEIVRLTARGEDVPLQTLGDRPDG AVLVDASAS
Sequences:
>Translated_329_residues MDIFAQWQGGGTELRWRSTTAANDGREVGVFSRRCGTPGAPALVLVHGFPTSSIDYFALAGELSRDFDIHLIDFPGYGLS DKPSEPYVYSLYDDARLLVHAITEVWRLSDYRMLTHDRGSSVGMIASGMLAALDPPAAPVDLILTNANIYLPLANLTAFQ SALLDPATARATAAATTPELLAAGMGASTFMPRRTLDDPEIAALAKCFAHNDGIRVLPDTIQYLNERAADETRWLEALST SDVNTTMVWGLHDNVAPLRVPNHVWQTYLKTKPGRNRYWVIPGADHYLQCDAPAQLAEIVRLTARGEDVPLQTLGDRPDG AVLVDASAS >Mature_329_residues MDIFAQWQGGGTELRWRSTTAANDGREVGVFSRRCGTPGAPALVLVHGFPTSSIDYFALAGELSRDFDIHLIDFPGYGLS DKPSEPYVYSLYDDARLLVHAITEVWRLSDYRMLTHDRGSSVGMIASGMLAALDPPAAPVDLILTNANIYLPLANLTAFQ SALLDPATARATAAATTPELLAAGMGASTFMPRRTLDDPEIAALAKCFAHNDGIRVLPDTIQYLNERAADETRWLEALST SDVNTTMVWGLHDNVAPLRVPNHVWQTYLKTKPGRNRYWVIPGADHYLQCDAPAQLAEIVRLTARGEDVPLQTLGDRPDG AVLVDASAS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AB hydrolase superfamily [H]
Homologues:
Organism=Homo sapiens, GI29294639, Length=287, Percent_Identity=26.1324041811847, Blast_Score=79, Evalue=7e-15, Organism=Homo sapiens, GI29294637, Length=287, Percent_Identity=26.1324041811847, Blast_Score=79, Evalue=7e-15, Organism=Homo sapiens, GI29294635, Length=287, Percent_Identity=26.1324041811847, Blast_Score=79, Evalue=7e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000073 - InterPro: IPR000639 [H]
Pfam domain/function: PF00561 Abhydrolase_1 [H]
EC number: NA
Molecular weight: Translated: 35791; Mature: 35791
Theoretical pI: Translated: 4.79; Mature: 4.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDIFAQWQGGGTELRWRSTTAANDGREVGVFSRRCGTPGAPALVLVHGFPTSSIDYFALA CCEEEEECCCCCEEEEEECCCCCCCCEECCHHHHCCCCCCCEEEEEECCCCCCCCEEEEE GELSRDFDIHLIDFPGYGLSDKPSEPYVYSLYDDARLLVHAITEVWRLSDYRMLTHDRGS CCCCCCCEEEEEECCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHCCCCEEEECCCCC SVGMIASGMLAALDPPAAPVDLILTNANIYLPLANLTAFQSALLDPATARATAAATTPEL CCCHHHHCHHEECCCCCCCEEEEEECCEEEEEEHHHHHHHHHHCCCHHHHHHHCCCCHHH LAAGMGASTFMPRRTLDDPEIAALAKCFAHNDGIRVLPDTIQYLNERAADETRWLEALST HHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEECCHHHHHHHHHCCHHHHHHHHHCC SDVNTTMVWGLHDNVAPLRVPNHVWQTYLKTKPGRNRYWVIPGADHYLQCDAPAQLAEIV CCCCEEEEEECCCCCCCEECCHHHHHHHHHCCCCCCEEEEEECCCCEEEECCHHHHHHHH RLTARGEDVPLQTLGDRPDGAVLVDASAS HHHCCCCCCCHHHCCCCCCCEEEEECCCC >Mature Secondary Structure MDIFAQWQGGGTELRWRSTTAANDGREVGVFSRRCGTPGAPALVLVHGFPTSSIDYFALA CCEEEEECCCCCEEEEEECCCCCCCCEECCHHHHCCCCCCCEEEEEECCCCCCCCEEEEE GELSRDFDIHLIDFPGYGLSDKPSEPYVYSLYDDARLLVHAITEVWRLSDYRMLTHDRGS CCCCCCCEEEEEECCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHCCCCEEEECCCCC SVGMIASGMLAALDPPAAPVDLILTNANIYLPLANLTAFQSALLDPATARATAAATTPEL CCCHHHHCHHEECCCCCCCEEEEEECCEEEEEEHHHHHHHHHHCCCHHHHHHHCCCCHHH LAAGMGASTFMPRRTLDDPEIAALAKCFAHNDGIRVLPDTIQYLNERAADETRWLEALST HHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEECCHHHHHHHHHCCHHHHHHHHHCC SDVNTTMVWGLHDNVAPLRVPNHVWQTYLKTKPGRNRYWVIPGADHYLQCDAPAQLAEIV CCCCEEEEEECCCCCCCEECCHHHHHHHHHCCCCCCEEEEEECCCCEEEECCHHHHHHHH RLTARGEDVPLQTLGDRPDGAVLVDASAS HHHCCCCCCCHHHCCCCCCCEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]