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The map label for this gene is lipM

Identifier: 41408139

GI number: 41408139

Start: 2248526

End: 2249818

Strand: Direct

Name: lipM

Synonym: MAP2041

Alternate gene names: NA

Gene position: 2248526-2249818 (Clockwise)

Preceding gene: 41408137

Following gene: 41408141

Centisome position: 46.56

GC content: 68.29

Gene sequence:

>1293_bases
ATGCGCAAAGCTCGAATCGTCCACCTCATCCGGCAGATCGGGTCGCTGACGGTCAGCGCGGTGACCGCGGCGTCCACCCT
CAACGCCTACCGGCCGCTGGCGCGCAAGGGGTACCCGTCGCTGTACGCCTGGATGTTCGGGCTCGTCGTCACCGAATTGC
CGCTGCAGACGATGCTCAGCCAGCTCGGCGGGCTGGCCCTGACGGCACGTCGCCTGACCCGGCCGGTCCGCATCATCGCG
TGGCTGGTCGCGGGCCTGTCGGCGCTCGGCCTGCTCAACCTGAGCCGGGCGGGCCACCGGGCCAATGTGCCGCTGACCGA
TGCGCTGGACAGCGAACTGGGCGCCGACCGGCTCACGGAGTCGGCGGACCTGTGGCGCCGGCCGACCGGCGCCGGCACCG
CCAAAACACCGGGCCTGCTGCGGATGCTGCGCATCTACCGCGACTACGCCCACGACTCCAACATCAGCTACGGCGAATTC
GGCAGCGCCAACCACCTGGACATCTGGCGCCGCCCCGACCTCGACCTCACCGGCAGGGCGCCGGTGCTCTTCCAGATCCC
CGGCGGCGCCTGGACGACGGGAAACAAACGCGGACAAGCACATCCGTTGATGAGCCATCTCGCGGAACTGGGCTGGATCT
GCGTGGCGATCAACTACCGGCACAGCCCGCGCAACACCTGGCCCGACCACATCGTCGACGTCAAGCGCGCCCTGGCCTGG
GTCAAACAACACATCGCCGGCTACGGCGGCGATCCCGACTTCATCGCCATCACCGGCGGGTCGGCCGGCGGCCACCTCTC
GTCGCTGGCCGCGCTCACCCCCAACGACCCGCGGTTCCAGCCCGGCTTCGAAGACGCCGATACCCGGGTGCAGGCGGCGG
TGCCGTTCTACGGCATCTACGACTTCACCCGCTTCGACGACAGCCTGCACCCGATGATGCCCGGACTGCTGATCAAGTCG
ATCATCAAACAACGGCCCGCCACCCACCTGGAGACGTTCGCCGCCGCCTCACCGATCACCCACGTAAACCCGGACGCACC
ACCGTTTTTCGTGCTGCACGGCCGCAATGACTCGTTGGCATACGTCGAGCAGGCCCGCGCGTTCGTCGAACGGCTGCGGC
AAGTCAGCACCCAACCGGTGGTCTACGCCGAATTGCCGTTCACCCAACACGCTTTCGACATCTTCGGCTCGGTGCGCGCC
GCGCACACCGCGGTGGCCGTCGAGCAGTTCCTCGCCGAGGTCTACTCGGCCCGCGATCGGCTGCCCGATCAGCTCATCGC
ACGGTCACGCTGA

Upstream 100 bases:

>100_bases
GCGGCCCGGCCGTCCCTCCCGACACCATGACGATTCGGCCAAATCCGCTAGCACCGGCGCTAGCGGATTCGGGCGTCACA
CCCCTACGTAAAGTGAGCCA

Downstream 100 bases:

>100_bases
GGGTGTAGGTGCACGCCGGTTTGGCATTCTTGTCCACGAAGCTGCTGTACGACGTGGTGATGGTGGTGCTCCCCGGTTTC
AGCGCCGCAAACGTCCACAC

Product: LipM

Products: NA

Alternate protein names: Esterase/Lipase; Esterase; Alpha/Beta Hydrolase Fold-3 Domain Protein; Lipase/Esterase; Alpha/Beta Hydrolase; Esterase LipO; Lipase; Esterase/Lipase-Like Protein; Alpha/Beta Hydrolase Fold-3 Domain-Containing Protein; Carboxylesterase LipQ; Alpha/Beta Hydrolase Fold Domain Protein; Pectinesterase; Membrane-Bound Esterase LipM; Esterase/Lipase-Like; Carboxylesterase Family Protein; Esterase LipC; Alpha/Beta Hydrolase Fold Protein; Alpha/Beta Hydrolase Fold Family Protein; Peptidase S9A/B/C Families; Esterase/Lipase/Thioesterase; Esterase LipM; Esterase/Lipase/Thioesterase Family Protein

Number of amino acids: Translated: 430; Mature: 430

Protein sequence:

>430_residues
MRKARIVHLIRQIGSLTVSAVTAASTLNAYRPLARKGYPSLYAWMFGLVVTELPLQTMLSQLGGLALTARRLTRPVRIIA
WLVAGLSALGLLNLSRAGHRANVPLTDALDSELGADRLTESADLWRRPTGAGTAKTPGLLRMLRIYRDYAHDSNISYGEF
GSANHLDIWRRPDLDLTGRAPVLFQIPGGAWTTGNKRGQAHPLMSHLAELGWICVAINYRHSPRNTWPDHIVDVKRALAW
VKQHIAGYGGDPDFIAITGGSAGGHLSSLAALTPNDPRFQPGFEDADTRVQAAVPFYGIYDFTRFDDSLHPMMPGLLIKS
IIKQRPATHLETFAAASPITHVNPDAPPFFVLHGRNDSLAYVEQARAFVERLRQVSTQPVVYAELPFTQHAFDIFGSVRA
AHTAVAVEQFLAEVYSARDRLPDQLIARSR

Sequences:

>Translated_430_residues
MRKARIVHLIRQIGSLTVSAVTAASTLNAYRPLARKGYPSLYAWMFGLVVTELPLQTMLSQLGGLALTARRLTRPVRIIA
WLVAGLSALGLLNLSRAGHRANVPLTDALDSELGADRLTESADLWRRPTGAGTAKTPGLLRMLRIYRDYAHDSNISYGEF
GSANHLDIWRRPDLDLTGRAPVLFQIPGGAWTTGNKRGQAHPLMSHLAELGWICVAINYRHSPRNTWPDHIVDVKRALAW
VKQHIAGYGGDPDFIAITGGSAGGHLSSLAALTPNDPRFQPGFEDADTRVQAAVPFYGIYDFTRFDDSLHPMMPGLLIKS
IIKQRPATHLETFAAASPITHVNPDAPPFFVLHGRNDSLAYVEQARAFVERLRQVSTQPVVYAELPFTQHAFDIFGSVRA
AHTAVAVEQFLAEVYSARDRLPDQLIARSR
>Mature_430_residues
MRKARIVHLIRQIGSLTVSAVTAASTLNAYRPLARKGYPSLYAWMFGLVVTELPLQTMLSQLGGLALTARRLTRPVRIIA
WLVAGLSALGLLNLSRAGHRANVPLTDALDSELGADRLTESADLWRRPTGAGTAKTPGLLRMLRIYRDYAHDSNISYGEF
GSANHLDIWRRPDLDLTGRAPVLFQIPGGAWTTGNKRGQAHPLMSHLAELGWICVAINYRHSPRNTWPDHIVDVKRALAW
VKQHIAGYGGDPDFIAITGGSAGGHLSSLAALTPNDPRFQPGFEDADTRVQAAVPFYGIYDFTRFDDSLHPMMPGLLIKS
IIKQRPATHLETFAAASPITHVNPDAPPFFVLHGRNDSLAYVEQARAFVERLRQVSTQPVVYAELPFTQHAFDIFGSVRA
AHTAVAVEQFLAEVYSARDRLPDQLIARSR

Specific function: Unknown

COG id: COG0657

COG function: function code I; Esterase/lipase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47370; Mature: 47370

Theoretical pI: Translated: 10.01; Mature: 10.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKARIVHLIRQIGSLTVSAVTAASTLNAYRPLARKGYPSLYAWMFGLVVTELPLQTMLS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHH
QLGGLALTARRLTRPVRIIAWLVAGLSALGLLNLSRAGHRANVPLTDALDSELGADRLTE
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCHHHHHH
SADLWRRPTGAGTAKTPGLLRMLRIYRDYAHDSNISYGEFGSANHLDIWRRPDLDLTGRA
HHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PVLFQIPGGAWTTGNKRGQAHPLMSHLAELGWICVAINYRHSPRNTWPDHIVDVKRALAW
CEEEECCCCCCCCCCCCCCCCHHHHHHHHHCEEEEEEEECCCCCCCCHHHHHHHHHHHHH
VKQHIAGYGGDPDFIAITGGSAGGHLSSLAALTPNDPRFQPGFEDADTRVQAAVPFYGIY
HHHHHHCCCCCCCEEEEECCCCCCHHHHHHEECCCCCCCCCCCCCCCCEEEECCCCCCCH
DFTRFDDSLHPMMPGLLIKSIIKQRPATHLETFAAASPITHVNPDAPPFFVLHGRNDSLA
HHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCHH
YVEQARAFVERLRQVSTQPVVYAELPFTQHAFDIFGSVRAAHTAVAVEQFLAEVYSARDR
HHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
LPDQLIARSR
CCHHHHHCCC
>Mature Secondary Structure
MRKARIVHLIRQIGSLTVSAVTAASTLNAYRPLARKGYPSLYAWMFGLVVTELPLQTMLS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHH
QLGGLALTARRLTRPVRIIAWLVAGLSALGLLNLSRAGHRANVPLTDALDSELGADRLTE
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCHHHHHH
SADLWRRPTGAGTAKTPGLLRMLRIYRDYAHDSNISYGEFGSANHLDIWRRPDLDLTGRA
HHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PVLFQIPGGAWTTGNKRGQAHPLMSHLAELGWICVAINYRHSPRNTWPDHIVDVKRALAW
CEEEECCCCCCCCCCCCCCCCHHHHHHHHHCEEEEEEEECCCCCCCCHHHHHHHHHHHHH
VKQHIAGYGGDPDFIAITGGSAGGHLSSLAALTPNDPRFQPGFEDADTRVQAAVPFYGIY
HHHHHHCCCCCCCEEEEECCCCCCHHHHHHEECCCCCCCCCCCCCCCCEEEECCCCCCCH
DFTRFDDSLHPMMPGLLIKSIIKQRPATHLETFAAASPITHVNPDAPPFFVLHGRNDSLA
HHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCHH
YVEQARAFVERLRQVSTQPVVYAELPFTQHAFDIFGSVRAAHTAVAVEQFLAEVYSARDR
HHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
LPDQLIARSR
CCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA