| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41408135
Identifier: 41408135
GI number: 41408135
Start: 2245733
End: 2246284
Strand: Direct
Name: 41408135
Synonym: MAP2037
Alternate gene names: NA
Gene position: 2245733-2246284 (Clockwise)
Preceding gene: 41408134
Following gene: 41408137
Centisome position: 46.5
GC content: 74.28
Gene sequence:
>552_bases ATGAGCACCCTGGTACTCACCGCGCACGGCAGCCGCGATCCGCGGTCGGCCGCCAATGCCGAGGCCGTCGCCGATCGGCT TCGGCGGATGCGGCCCGGCCTCGACGTGCGGCTGGCCTTCCTCGAGCTCAACGCCCCGAACTTCGTCGACGTGCTGGCCG GGTTGCCGGACAGCCGGCGCGCCGTGGTCGCCCCGCTGCTGCTGGCCAGCGCCTACCACGCGCGGCTCGACATCCCCGAA CAGATCGCCCGCGCCGGTGCGCGCGGCATCCGGCAGGCCGACGTGCTGGGCGAGGACGACCGGTTGGTGGCGGTGCTGCG CGGGCGTCTGGCCGAGATCGGGGTTTCCCCGCTCGACGACGATCTCGGGGTGATGGTGGTGGCGATCGGTTCGTCGAACA TCGCCGCCAACGCACGCACCGCCAAGGTGGCGTCCCGGTTGGCCGCCGGAACCCGATGGGCTTGCGCCACAACGGCTTCG CGACCCGGCCCGAGGCGTCGGTGGCCCGCGCCGCCGACCAGTTGCGCCGTCGCGGCGCGCGCCGGCTGGTGA
Upstream 100 bases:
>100_bases TCGGCTGCGCCCCGTGCACCGCCAAGCCGGCACCGGGCGAGGATCCGCGCAGCGGGCGTTGGCGGGGACGAAACAAGGTC GAATGCGGGTTACACGCCTC
Downstream 100 bases:
>100_bases TCGCGCCGTGGTTTCTGGCGCCGGGATTCATCACCGACGGGGTGTCAACCTTCGCCCGGGACAACGGGATTCGCATGGCC GCCCCGTTGGGGGCGCACCG
Product: hypothetical protein
Products: NA
Alternate protein names: Cobalamin Biosynthesis CbiX Protein; LOW QUALITY PROTEIN Secreted Protein; Ferrochelatase; CbiX Family Protein; Sirohydrochlorin Cobaltochelatase; Cobalamin Biosynthesis Protein Cbix; Cobalamin Biosynthesis-Related Protein
Number of amino acids: Translated: 183; Mature: 182
Protein sequence:
>183_residues MSTLVLTAHGSRDPRSAANAEAVADRLRRMRPGLDVRLAFLELNAPNFVDVLAGLPDSRRAVVAPLLLASAYHARLDIPE QIARAGARGIRQADVLGEDDRLVAVLRGRLAEIGVSPLDDDLGVMVVAIGSSNIAANARTAKVASRLAAGTRWACATTAS RPGPRRRWPAPPTSCAVAARAGW
Sequences:
>Translated_183_residues MSTLVLTAHGSRDPRSAANAEAVADRLRRMRPGLDVRLAFLELNAPNFVDVLAGLPDSRRAVVAPLLLASAYHARLDIPE QIARAGARGIRQADVLGEDDRLVAVLRGRLAEIGVSPLDDDLGVMVVAIGSSNIAANARTAKVASRLAAGTRWACATTAS RPGPRRRWPAPPTSCAVAARAGW >Mature_182_residues STLVLTAHGSRDPRSAANAEAVADRLRRMRPGLDVRLAFLELNAPNFVDVLAGLPDSRRAVVAPLLLASAYHARLDIPEQ IARAGARGIRQADVLGEDDRLVAVLRGRLAEIGVSPLDDDLGVMVVAIGSSNIAANARTAKVASRLAAGTRWACATTASR PGPRRRWPAPPTSCAVAARAGW
Specific function: Unknown
COG id: COG2138
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19298; Mature: 19167
Theoretical pI: Translated: 11.68; Mature: 11.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTLVLTAHGSRDPRSAANAEAVADRLRRMRPGLDVRLAFLELNAPNFVDVLAGLPDSRR CCEEEEEECCCCCCCHHCCHHHHHHHHHHHCCCCCEEEEEEEECCCCHHHHHHCCCCCCH AVVAPLLLASAYHARLDIPEQIARAGARGIRQADVLGEDDRLVAVLRGRLAEIGVSPLDD HHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHHHCCCCCCCC DLGVMVVAIGSSNIAANARTAKVASRLAAGTRWACATTASRPGPRRRWPAPPTSCAVAAR CCCEEEEEECCCCCCCCHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCHHEEEEC AGW CCC >Mature Secondary Structure STLVLTAHGSRDPRSAANAEAVADRLRRMRPGLDVRLAFLELNAPNFVDVLAGLPDSRR CEEEEEECCCCCCCHHCCHHHHHHHHHHHCCCCCEEEEEEEECCCCHHHHHHCCCCCCH AVVAPLLLASAYHARLDIPEQIARAGARGIRQADVLGEDDRLVAVLRGRLAEIGVSPLDD HHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHHHCCCCCCCC DLGVMVVAIGSSNIAANARTAKVASRLAAGTRWACATTASRPGPRRRWPAPPTSCAVAAR CCCEEEEEECCCCCCCCHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCHHEEEEC AGW CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA