| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41408123
Identifier: 41408123
GI number: 41408123
Start: 2232365
End: 2232829
Strand: Reverse
Name: 41408123
Synonym: MAP2025c
Alternate gene names: NA
Gene position: 2232829-2232365 (Counterclockwise)
Preceding gene: 41408125
Following gene: 41408122
Centisome position: 46.23
GC content: 64.09
Gene sequence:
>465_bases TTGGAGCGCCCCGACACCCTGGACGTCCTGCGCCTGATCGCCAACGCGCCCAACATCTTCGAATCCTGGTCGCAGATGGC CAGCCAACTGTTTGACACCGAAACCTTTAGCCCTCGGATGCGCGAGGTGATCATCCTGCGCGTCGCGCATCTGCAGGATT CGCCCTACGAGCTCGCCCAGCACGTCGTCTTCGCCCGCGCGGCCGGCCTGACCGACCGCCAGATCGACGCCCTGCAAGAC AAGGCGGACCTCGACGCGGCAGGGTTCACCGACGACGAACGCATCCTCATCGACACCGTCACGGAGCTGTGCACCACCCA CCGCCTGGACGACGCCTCCTTCGCCAAAGCGCACACCCTGCTCGGCGACGAGGCGCTTACCGAACTGCTGATGATCGTCG CCACCTACTACGGCCTGGCATTAGTCCTTAATGCAACGGACCTCGACATCGACGCACCGACATGA
Upstream 100 bases:
>100_bases CTTCGGTGAACGAGCTGACGACACCGGCGGAAAGGCATCAGGAGTGACCCGACTGCCCCTCGCGAACGCCGACGAGCAAC CCGACCACATCCGCCAACTC
Downstream 100 bases:
>100_bases CCCGAATCCCGTACCGCCGGCCCGAAGAGATGCCCGCCAGAGCCCGCGAATTGACCGCCCGCCGAGGCAATCTCAACGTC TACCGCACCCTGGCCAACGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 154; Mature: 154
Protein sequence:
>154_residues MERPDTLDVLRLIANAPNIFESWSQMASQLFDTETFSPRMREVIILRVAHLQDSPYELAQHVVFARAAGLTDRQIDALQD KADLDAAGFTDDERILIDTVTELCTTHRLDDASFAKAHTLLGDEALTELLMIVATYYGLALVLNATDLDIDAPT
Sequences:
>Translated_154_residues MERPDTLDVLRLIANAPNIFESWSQMASQLFDTETFSPRMREVIILRVAHLQDSPYELAQHVVFARAAGLTDRQIDALQD KADLDAAGFTDDERILIDTVTELCTTHRLDDASFAKAHTLLGDEALTELLMIVATYYGLALVLNATDLDIDAPT >Mature_154_residues MERPDTLDVLRLIANAPNIFESWSQMASQLFDTETFSPRMREVIILRVAHLQDSPYELAQHVVFARAAGLTDRQIDALQD KADLDAAGFTDDERILIDTVTELCTTHRLDDASFAKAHTLLGDEALTELLMIVATYYGLALVLNATDLDIDAPT
Specific function: Unknown
COG id: COG2128
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17135; Mature: 17135
Theoretical pI: Translated: 4.08; Mature: 4.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MERPDTLDVLRLIANAPNIFESWSQMASQLFDTETFSPRMREVIILRVAHLQDSPYELAQ CCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHH HVVFARAAGLTDRQIDALQDKADLDAAGFTDDERILIDTVTELCTTHRLDDASFAKAHTL HHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHH LGDEALTELLMIVATYYGLALVLNATDLDIDAPT HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure MERPDTLDVLRLIANAPNIFESWSQMASQLFDTETFSPRMREVIILRVAHLQDSPYELAQ CCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHH HVVFARAAGLTDRQIDALQDKADLDAAGFTDDERILIDTVTELCTTHRLDDASFAKAHTL HHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHH LGDEALTELLMIVATYYGLALVLNATDLDIDAPT HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA